RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 OR4X1Q8NH49 305 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 PRDM6Q9NQX0 595 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 COLQQ9Y215 455 aaPredicted RBP6.92□□□□□ -1.3
UBE4B-202ENST00000343090 GRIFINA4D1Z8 144 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 SNURFLB1AK76 121 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 H0Y980 276 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 NPY1RP25929 384 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 HTR1DP28221 377 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 TSPAN7P41732 249 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 SLC35B1P78383 322 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 LINC00596Q86U02 117 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 PDPNQ86YL7 162 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 LRRC75AQ8NAA5 344 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 SGMS2Q8NHU3 365 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 FLYWCH2Q96CP2 140 aaKnown RBP6.92□□□□□ -1.3
UBE4B-202ENST00000343090 ADTRPQ96IZ2 230 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 GSX1Q9H4S2 264 aaPredicted RBP6.92□□□□□ -1.3
UBE4B-202ENST00000343090 ZNF646O15015 1829 aaPredicted RBP6.92□□□□□ -1.3
UBE4B-202ENST00000343090 ZNF506Q5JVG8 444 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 Q5PR19 223 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 LINC00114Q6XXX2 140 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 ZNF818PQ6ZRF7 136 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 CCL13Q99616 98 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 MIEN1Q9BRT3 115 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 RTN4RQ9BZR6 473 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 CISD1Q9NZ45 108 aaKnown RBP6.92□□□□□ -1.3
UBE4B-202ENST00000343090 TMEM210A6NLX4 147 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 PRRX1P54821 245 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 FAM162BQ5T6X4 162 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 WDR73Q6P4I2 378 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 BEND2Q8NDZ0 799 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 TMEM208Q9BTX3 173 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 RBKSQ9H477 322 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 TMEM167BQ9NRX6 74 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 DLL3Q9NYJ7 618 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 PILRBQ9UKJ0 227 aa6.92□□□□□ -1.3
UBE4B-202ENST00000343090 MTCL1Q9Y4B5 1905 aaKnown RBP6.91□□□□□ -1.3
UBE4B-202ENST00000343090 LINC00614P0C842 121 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 ASPHD2Q6ICH7 369 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 FAM216AQ8WUB2 273 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 MARS2Q96GW9 593 aaKnown RBP6.91□□□□□ -1.3
UBE4B-202ENST00000343090 WDR61Q9GZS3 305 aaKnown RBP6.91□□□□□ -1.3
UBE4B-202ENST00000343090 TRIOBPQ9H2D6 2365 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 LRRC3CA6NJW4 275 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 E9PQ18 207 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 J3QR06 171 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 CA11O75493 328 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 NEURL1O76050 574 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 AMBPP02760 352 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 OR4A8P0C604 315 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 CD1BP29016 333 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 TEPPQ6URK8 271 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 ZNF664Q8N3J9 261 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 ZCCHC14Q8WYQ9 949 aaKnown RBP6.91□□□□□ -1.3
UBE4B-202ENST00000343090 LEAP2Q969E1 77 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 ZNF837Q96EG3 531 aaPredicted RBP6.91□□□□□ -1.3
UBE4B-202ENST00000343090 HELTA6NFD8 242 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 LYPD3O95274 346 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 S100A4P26447 101 aaKnown RBP6.91□□□□□ -1.3
UBE4B-202ENST00000343090 ERVFRD-1P60508 538 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 PRSS3P2Q8NHM4 247 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 DNASE2BQ8WZ79 361 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 OR51B2Q9Y5P1 312 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 IGKV3D-11A0A0A0MRZ8 115 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 A0A1B0GWJ7 208 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 ZIC3O60481 467 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 CELA3AP09093 270 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 TMEM187Q14656 261 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 TGIF2LYQ8IUE0 185 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 FGFRL1Q8N441 504 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 FLVCR1-AS1Q8TAF5 88 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 OR2V2Q96R30 315 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 IL36RNQ9UBH0 155 aa6.91□□□□□ -1.3
UBE4B-202ENST00000343090 ABCA7Q8IZY2 2146 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 IGHV3-72A0A0B4J1Y9 119 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 NDUFB4O95168 129 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 CD3EP07766 207 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 BRS3P32247 399 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 ZNF658BQ4V348 819 aaPredicted RBP6.9□□□□□ -1.3
UBE4B-202ENST00000343090 FAM214BQ7L5A3 538 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 ZBTB34Q8NCN2 500 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 A0A0G2JMM0 328 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 A0A1W2PPB8 328 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 A0A1W2PRS3 328 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 KIR3DP1A8MWS1 328 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 ZNF207O43670 478 aaKnown RBP6.9□□□□□ -1.3
UBE4B-202ENST00000343090 PDE6DO43924 150 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 CXorf1O96002 111 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 ZNF735P0CB33 412 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 SMIM17P0DL12 118 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 NHLH1Q02575 133 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 OR4C12Q96R67 309 aa6.9□□□□□ -1.3
UBE4B-202ENST00000343090 CHCHD2Q9Y6H1 151 aaPredicted RBP6.9□□□□□ -1.3
UBE4B-202ENST00000343090 IGHV2-5P01817 119 aa6.9□□□□□ -1.31
UBE4B-202ENST00000343090 MEF2BQ02080 365 aaPredicted RBP6.9□□□□□ -1.31
UBE4B-202ENST00000343090 C10orf113Q5VZT2 155 aa6.9□□□□□ -1.31
UBE4B-202ENST00000343090 ATOH7Q8N100 152 aa6.9□□□□□ -1.31
UBE4B-202ENST00000343090 TMEM54Q969K7 222 aa6.9□□□□□ -1.31
UBE4B-202ENST00000343090 FOXD3Q9UJU5 478 aaPredicted RBP6.9□□□□□ -1.31
UBE4B-202ENST00000343090 PRNDQ9UKY0 176 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms