RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 CA13Q8N1Q1 262 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 IL18BPO95998 194 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 HIST1H1EP10412 219 aaKnown RBP3.08□□□□□ -1.92
SYNE1-201ENST00000341594 ST20Q9HBF5 79 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 NAT8BQ9UHF3 227 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 A0A0U1RQV5 110 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 GRM6O15303 877 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 HPNP05981 417 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 C3AR1Q16581 482 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF429Q86V71 674 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 SAXO1Q8IYX7 474 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 SIGLEC12Q96PQ1 595 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 TMEM126AQ9H061 195 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 GTSF1LQ9H1H1 148 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 KIR2DS1A0A191URI9 304 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 GAGE12JA6NER3 117 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 GAGE7O76087 117 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 CRYGCP07315 174 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 FAM157CP0CG43 387 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 GAGE12FP0CL80 117 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 GAGE12GP0CL81 117 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 GAGE12IP0CL82 117 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 KIR2DS4P43632 304 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 GAGE4Q13068 117 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 VGLL4Q14135 290 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 KIR2DS1Q14954 304 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 TMEM30BQ3MIR4 351 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 Q56UQ5 140 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 AMMECR1LQ6DCA0 310 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 ZDHHC23Q8IYP9 409 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 COX6CP09669 75 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 TCF24Q7RTU0 167 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 OR2M3Q8NG83 312 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 NAA60Q9H7X0 242 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 H0YIG0 161 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 RAMP3O60896 148 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 VDAC1P21796 283 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 ADAT3Q96EY9 351 aaPredicted RBP3.08□□□□□ -1.92
SYNE1-201ENST00000341594 MMP17Q9ULZ9 603 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 COL4A1P02462 1669 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 IFITM10A6NMD0 228 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 FCGR3BO75015 233 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 TIAL1Q01085 375 aaKnown RBP eCLIP3.08□□□□□ -1.92
SYNE1-201ENST00000341594 MSRB3Q8IXL7 192 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 MEGF9Q9H1U4 602 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 SERGEFQ9UGK8 458 aa3.08□□□□□ -1.92
SYNE1-201ENST00000341594 OR11H12B2RN74 326 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 OR11H1Q8NG94 326 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 OR11H2Q8NH07 326 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 C8orf44Q96CB5 159 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 TLNRD1Q9H1K6 362 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 ADAM20O43506 726 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 SLCO4C1Q6ZQN7 724 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 COX18Q8N8Q8 333 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 PYGO2Q9BRQ0 406 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 Q9N2J8 555 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 EDDM3BP56851 147 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 TMEM211Q6ICI0 200 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 EMC9Q9Y3B6 208 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 GPR179Q6PRD1 2367 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 CHST1O43916 411 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 ZNF117Q03924 483 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 TIGITQ495A1 244 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 C1orf210Q8IVY1 113 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 HIST1H2AAQ96QV6 131 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 MAP1LC3CQ9BXW4 147 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 ELOVL5Q9NYP7 299 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 EHFQ9NZC4 300 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 NAT8Q9UHE5 227 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 TRBV5-7A0A0A0MS05 114 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 IGKV3-20P01619 116 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 CT45A6P0DMU7 189 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 CT45A5P0DMU8 189 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 CT45A7P0DMV0 189 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 CT45A1Q5HYN5 189 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 LINC01465Q8N7H1 131 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 OR4C16Q8NGL9 310 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 CT45A3Q8NHU0 189 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 TMEM74BQ9NUR3 256 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 IGKV3OR2-268A0A0C4DH90 116 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 TRBV5-5A0A0J9YX44 114 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 TNFRSF6BO95407 300 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 UBE2V1Q13404 147 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 OR4A16Q8NH70 328 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 WIPF3A6NGB9 483 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 NRN1LQ496H8 165 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 CD99L2Q8TCZ2 262 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 DEFB133Q30KQ1 61 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 FAM89BQ8N5H3 189 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 NPEPL1Q8NDH3 523 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 ZFYVE26Q68DK2 2539 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 DLEU1O43261 78 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 OR51H1Q8NH63 302 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 MBD3L4A6NDZ8 208 aaPredicted RBP3.07□□□□□ -1.92
SYNE1-201ENST00000341594 MBD3L3A6NE82 208 aaPredicted RBP3.07□□□□□ -1.92
SYNE1-201ENST00000341594 SIVA1O15304 175 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 FOXH1O75593 365 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 SLC35G6P0C7Q6 338 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 BRS3P32247 399 aa3.07□□□□□ -1.92
SYNE1-201ENST00000341594 IL11RAQ14626 422 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms