RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 FOXRED2Q8IWF2 684 aa14.19□□□□□ -0.14
CLDN4-201ENST00000340958 TCTEX1D1Q8N7M0 179 aa14.19□□□□□ -0.14
CLDN4-201ENST00000340958 OR11H4Q8NGC9 324 aa14.19□□□□□ -0.14
CLDN4-201ENST00000340958 CD300LFQ8TDQ1 290 aa14.19□□□□□ -0.14
CLDN4-201ENST00000340958 C10orf105Q8TEF2 133 aa14.19□□□□□ -0.14
CLDN4-201ENST00000340958 ZNRD1Q9P1U0 126 aa14.19□□□□□ -0.14
CLDN4-201ENST00000340958 HSPB11Q9Y547 144 aa14.19□□□□□ -0.14
CLDN4-201ENST00000340958 MALRD1Q5VYJ5 2156 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 LINC00473A8K010 186 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 ENSAO43768 121 aaKnown RBP14.18□□□□□ -0.14
CLDN4-201ENST00000340958 RAMP3O60896 148 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 FCGR3BO75015 233 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 RBP4P02753 201 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 PET100P0DJ07 73 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 RPA2P15927 270 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 COX7A1P24310 79 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 IL3RAP26951 378 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 DSCR9P59020 149 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 LINC00205P59089 165 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 EIF4EBP1Q13541 118 aaPredicted RBP14.18□□□□□ -0.14
CLDN4-201ENST00000340958 SMCO1Q147U7 214 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 EPHA1P21709 976 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 ZFP36P26651 326 aaKnown RBP14.18□□□□□ -0.14
CLDN4-201ENST00000340958 PRB3Q04118 309 aaPredicted RBP14.18□□□□□ -0.14
CLDN4-201ENST00000340958 C11orf42Q8N5U0 333 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 ADTRPQ96IZ2 230 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 CLEC7AQ9BXN2 247 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 GSX2Q9BZM3 304 aa14.18□□□□□ -0.14
CLDN4-201ENST00000340958 DOCK11Q5JSL3 2073 aa14.17□□□□□ -0.14
CLDN4-201ENST00000340958 A0A087X0M5 115 aa14.17□□□□□ -0.14
CLDN4-201ENST00000340958 A0A1B0GX30 115 aa14.17□□□□□ -0.14
CLDN4-201ENST00000340958 FOXH1O75593 365 aa14.17□□□□□ -0.14
CLDN4-201ENST00000340958 KIR2DS2P43631 304 aa14.17□□□□□ -0.14
CLDN4-201ENST00000340958 THBS3P49746 956 aa14.17□□□□□ -0.14
CLDN4-201ENST00000340958 ZNF585BQ52M93 769 aa14.17□□□□□ -0.14
CLDN4-201ENST00000340958 NCR3LG1Q68D85 454 aa14.17□□□□□ -0.14
CLDN4-201ENST00000340958 C11orf87Q6NUJ2 197 aa14.17□□□□□ -0.14
CLDN4-201ENST00000340958 ODF3L1Q8IXM7 274 aa14.17□□□□□ -0.14
CLDN4-201ENST00000340958 C8orf31Q8N9H6 132 aa14.17□□□□□ -0.14
CLDN4-201ENST00000340958 OR13D1Q8NGV5 346 aa14.17□□□□□ -0.14
CLDN4-201ENST00000340958 IGHV2-26A0A0B4J1V2 119 aa14.16□□□□□ -0.14
CLDN4-201ENST00000340958 G3V3Q6 166 aa14.16□□□□□ -0.14
CLDN4-201ENST00000340958 M0R1W7 72 aa14.16□□□□□ -0.14
CLDN4-201ENST00000340958 ARPC5O15511 151 aa14.16□□□□□ -0.14
CLDN4-201ENST00000340958 PROP1O75360 226 aa14.16□□□□□ -0.14
CLDN4-201ENST00000340958 MPC2O95563 127 aa14.16□□□□□ -0.14
CLDN4-201ENST00000340958 KRASP01116 189 aa14.16□□□□□ -0.14
CLDN4-201ENST00000340958 RLN2P04090 185 aa14.16□□□□□ -0.14
CLDN4-201ENST00000340958 DLX1P56177 255 aa14.16□□□□□ -0.14
CLDN4-201ENST00000340958 LMO4P61968 165 aa14.16□□□□□ -0.14
CLDN4-201ENST00000340958 LPAR2Q9HBW0 351 aa14.16□□□□□ -0.14
CLDN4-201ENST00000340958 SIRT7Q9NRC8 400 aa14.16□□□□□ -0.14
CLDN4-201ENST00000340958 IGHV4-30-2A0A087WSY4 118 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 TRAV14DV4A0A0A6YYC5 116 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 S1PR2O95136 353 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 PAX1P15863 534 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 RAB32Q13637 225 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 ZNF546Q86UE3 836 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 FAM219AQ8IW50 185 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 LINC00311Q8N616 119 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 OR1S1Q8NH92 325 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 TMEM186Q96B77 213 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 LSM5Q9Y4Y9 91 aaKnown RBP14.15□□□□□ -0.14
CLDN4-201ENST00000340958 ARID1AO14497 2285 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 PRRC2AP48634 2157 aaKnown RBP14.15□□□□□ -0.14
CLDN4-201ENST00000340958 KIAA1324LA8MWY0 1029 aaPredicted RBP14.15□□□□□ -0.14
CLDN4-201ENST00000340958 SNAPC5O75971 98 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 REG1BP48304 166 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 AP2S1P53680 142 aaPredicted RBP14.15□□□□□ -0.14
CLDN4-201ENST00000340958 CLEC12BQ2HXU8 276 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 C1orf229Q6ZS94 237 aaPredicted RBP14.15□□□□□ -0.14
CLDN4-201ENST00000340958 PNKDQ8N490 385 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 ZNF596Q8TC21 504 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 DCUN1D4Q92564 292 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 TNFRSF14Q92956 283 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 FAM212BQ9NTI7 297 aaPredicted RBP14.15□□□□□ -0.14
CLDN4-201ENST00000340958 ZFP57Q9NU63 452 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 MBD2Q9UBB5 411 aa14.15□□□□□ -0.14
CLDN4-201ENST00000340958 ZNF469Q96JG9 3925 aaPredicted RBP14.14□□□□□ -0.15
CLDN4-201ENST00000340958 IGHV4-61A0A0C4DH41 118 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 L7N2F9 121 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 TSC22D2O75157 780 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 HPRT1P00492 218 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 IGKV1-39P01597 117 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 IGKV1D-39P04432 117 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 G6PCP35575 357 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 NUP62P37198 522 aaPredicted RBP14.14□□□□□ -0.15
CLDN4-201ENST00000340958 RTL8BQ17RB0 113 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 NMSQ5H8A3 153 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 ZNF833PQ6ZTB9 187 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 INO80EQ8NBZ0 244 aaPredicted RBP14.14□□□□□ -0.15
CLDN4-201ENST00000340958 OR4S2Q8NH73 311 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 LSM10Q969L4 123 aaKnown RBP14.14□□□□□ -0.15
CLDN4-201ENST00000340958 GPR146Q96CH1 333 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 MBD6Q96DN6 1003 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 ZNF251Q9BRH9 671 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 HEXA-AS1Q9H8Q6 139 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 ITPR3Q14573 2671 aa14.14□□□□□ -0.15
CLDN4-201ENST00000340958 IGHV2-70DA0A0C4DH43 119 aa14.13□□□□□ -0.15
CLDN4-201ENST00000340958 SLC25A4P12235 298 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms