RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 MTCP1P56278 107 aa7.51□□□□□ -1.21
ATXN3-201ENST00000340660 ALKBH1Q13686 389 aaKnown RBP7.51□□□□□ -1.21
ATXN3-201ENST00000340660 GNMTQ14749 295 aa7.51□□□□□ -1.21
ATXN3-201ENST00000340660 TOR2AQ5JU69 321 aa7.51□□□□□ -1.21
ATXN3-201ENST00000340660 SLC25A30Q5SVS4 291 aa7.51□□□□□ -1.21
ATXN3-201ENST00000340660 SCXQ7RTU7 201 aa7.51□□□□□ -1.21
ATXN3-201ENST00000340660 STHQ8IWL8 128 aa7.51□□□□□ -1.21
ATXN3-201ENST00000340660 MRPS24Q96EL2 167 aaKnown RBP7.51□□□□□ -1.21
ATXN3-201ENST00000340660 PHB2Q99623 299 aa7.51□□□□□ -1.21
ATXN3-201ENST00000340660 RNF5Q99942 180 aa7.51□□□□□ -1.21
ATXN3-201ENST00000340660 FUZQ9BT04 418 aa7.51□□□□□ -1.21
ATXN3-201ENST00000340660 UPK3BQ9BT76 320 aa7.51□□□□□ -1.21
ATXN3-201ENST00000340660 H7C2Y5 167 aa7.5□□□□□ -1.21
ATXN3-201ENST00000340660 SRSF10O75494 262 aaKnown RBP7.5□□□□□ -1.21
ATXN3-201ENST00000340660 IGKV1-16P04430 117 aa7.5□□□□□ -1.21
ATXN3-201ENST00000340660 H1F0P07305 194 aaKnown RBP7.5□□□□□ -1.21
ATXN3-201ENST00000340660 SCAND1P57086 179 aa7.5□□□□□ -1.21
ATXN3-201ENST00000340660 DEFB131AP59861 70 aa7.5□□□□□ -1.21
ATXN3-201ENST00000340660 MORN2Q502X0 79 aa7.5□□□□□ -1.21
ATXN3-201ENST00000340660 C6orf141Q5SZD1 244 aa7.5□□□□□ -1.21
ATXN3-201ENST00000340660 ZNF529Q6P280 563 aa7.5□□□□□ -1.21
ATXN3-201ENST00000340660 OR5D18Q8NGL1 313 aa7.5□□□□□ -1.21
ATXN3-201ENST00000340660 C10orf35Q96D05 121 aa7.5□□□□□ -1.21
ATXN3-201ENST00000340660 WASHC3Q9Y3C0 194 aa7.5□□□□□ -1.21
ATXN3-201ENST00000340660 IGKV3-7A0A075B6H7 116 aa7.49□□□□□ -1.21
ATXN3-201ENST00000340660 TMEM30CPA0ZSE6 113 aa7.49□□□□□ -1.21
ATXN3-201ENST00000340660 IGLV2-14P01704 120 aa7.49□□□□□ -1.21
ATXN3-201ENST00000340660 RPA2P15927 270 aa7.49□□□□□ -1.21
ATXN3-201ENST00000340660 CCL1P22362 96 aa7.49□□□□□ -1.21
ATXN3-201ENST00000340660 KDELR2P33947 212 aa7.49□□□□□ -1.21
ATXN3-201ENST00000340660 MAGEA2P43356 314 aa7.49□□□□□ -1.21
ATXN3-201ENST00000340660 HCCSP53701 268 aa7.49□□□□□ -1.21
ATXN3-201ENST00000340660 CLINT1Q14677 625 aa7.49□□□□□ -1.21
ATXN3-201ENST00000340660 C19orf35Q6ZS72 473 aa7.49□□□□□ -1.21
ATXN3-201ENST00000340660 ELMOD2Q8IZ81 293 aa7.49□□□□□ -1.21
ATXN3-201ENST00000340660 GIMAP1Q8WWP7 306 aa7.49□□□□□ -1.21
ATXN3-201ENST00000340660 UHRF2Q96PU4 802 aa7.49□□□□□ -1.21
ATXN3-201ENST00000340660 NR1H4Q96RI1 486 aaPredicted RBP7.49□□□□□ -1.21
ATXN3-201ENST00000340660 TSNAXQ99598 290 aaKnown RBP7.49□□□□□ -1.21
ATXN3-201ENST00000340660 GTF2A1LQ9UNN4 478 aa7.49□□□□□ -1.21
ATXN3-201ENST00000340660 TEX48A0A1B0GUV7 120 aa7.48□□□□□ -1.21
ATXN3-201ENST00000340660 TLDC2A0PJX2 215 aa7.48□□□□□ -1.21
ATXN3-201ENST00000340660 TMEM189A5PLL7 270 aa7.48□□□□□ -1.21
ATXN3-201ENST00000340660 E2F6O75461 281 aa7.48□□□□□ -1.21
ATXN3-201ENST00000340660 CRYGBP07316 175 aa7.48□□□□□ -1.21
ATXN3-201ENST00000340660 ALOX5APP20292 161 aa7.48□□□□□ -1.21
ATXN3-201ENST00000340660 RPL39P5Q59GN2 51 aa7.48□□□□□ -1.21
ATXN3-201ENST00000340660 FAM24BQ8N5W8 94 aa7.48□□□□□ -1.21
ATXN3-201ENST00000340660 OR8D4Q8NGM9 314 aa7.48□□□□□ -1.21
ATXN3-201ENST00000340660 TMEM190Q8WZ59 177 aa7.48□□□□□ -1.21
ATXN3-201ENST00000340660 RNF2Q99496 336 aa7.48□□□□□ -1.21
ATXN3-201ENST00000340660 DPCDQ9BVM2 203 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-201ENST00000340660 HSF4Q9ULV5 492 aa7.48□□□□□ -1.21
ATXN3-201ENST00000340660 GMNNO75496 209 aa7.47□□□□□ -1.21
ATXN3-201ENST00000340660 HBZP02008 142 aa7.47□□□□□ -1.21
ATXN3-201ENST00000340660 MC5RP33032 325 aa7.47□□□□□ -1.21
ATXN3-201ENST00000340660 PPP1CCP36873 323 aaKnown RBP7.47□□□□□ -1.21
ATXN3-201ENST00000340660 GSSP48637 474 aa7.47□□□□□ -1.21
ATXN3-201ENST00000340660 ZNF829Q3KNS6 432 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-201ENST00000340660 BCL2L15Q5TBC7 163 aa7.47□□□□□ -1.21
ATXN3-201ENST00000340660 IQCF1Q8N6M8 205 aa7.47□□□□□ -1.21
ATXN3-201ENST00000340660 SUMF2Q8NBJ7 301 aa7.47□□□□□ -1.21
ATXN3-201ENST00000340660 RP9Q8TA86 221 aaKnown RBP7.47□□□□□ -1.21
ATXN3-201ENST00000340660 ADI1Q9BV57 179 aa7.47□□□□□ -1.21
ATXN3-201ENST00000340660 ZNF436Q9C0F3 470 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-201ENST00000340660 IFI27L2Q9H2X8 130 aa7.47□□□□□ -1.21
ATXN3-201ENST00000340660 RHOFQ9HBH0 211 aa7.47□□□□□ -1.21
ATXN3-201ENST00000340660 DAZ1Q9NQZ3 744 aaKnown RBP7.47□□□□□ -1.21
ATXN3-201ENST00000340660 TMEM140Q9NV12 185 aa7.47□□□□□ -1.21
ATXN3-201ENST00000340660 AASSQ9UDR5 926 aa7.47□□□□□ -1.21
ATXN3-201ENST00000340660 ENOPH1Q9UHY7 261 aa7.47□□□□□ -1.21
ATXN3-201ENST00000340660 SPINT2O43291 252 aa7.46□□□□□ -1.22
ATXN3-201ENST00000340660 PSMB6P28072 239 aa7.46□□□□□ -1.22
ATXN3-201ENST00000340660 STX1BP61266 288 aa7.46□□□□□ -1.22
ATXN3-201ENST00000340660 STX3Q13277 289 aa7.46□□□□□ -1.22
ATXN3-201ENST00000340660 FAM71F2Q6NXP2 309 aa7.46□□□□□ -1.22
ATXN3-201ENST00000340660 DEGS2Q6QHC5 323 aa7.46□□□□□ -1.22
ATXN3-201ENST00000340660 PRSS35Q8N3Z0 413 aa7.46□□□□□ -1.22
ATXN3-201ENST00000340660 AIFM2Q9BRQ8 373 aa7.46□□□□□ -1.22
ATXN3-201ENST00000340660 TTTY10Q9BZA0 68 aa7.46□□□□□ -1.22
ATXN3-201ENST00000340660 OR2S2Q9NQN1 319 aa7.46□□□□□ -1.22
ATXN3-201ENST00000340660 PUS1Q9Y606 427 aaKnown RBP eCLIP7.46□□□□□ -1.22
ATXN3-201ENST00000340660 ENPP4Q9Y6X5 453 aa7.46□□□□□ -1.22
ATXN3-201ENST00000340660 MPPED1O15442 326 aa7.45□□□□□ -1.22
ATXN3-201ENST00000340660 SNX3O60493 162 aa7.45□□□□□ -1.22
ATXN3-201ENST00000340660 MT-ND4P03905 459 aa7.45□□□□□ -1.22
ATXN3-201ENST00000340660 CLEC3BP05452 202 aa7.45□□□□□ -1.22
ATXN3-201ENST00000340660 ZNF3P17036 446 aa7.45□□□□□ -1.22
ATXN3-201ENST00000340660 IGFBP3P17936 291 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-201ENST00000340660 DAD1P61803 113 aa7.45□□□□□ -1.22
ATXN3-201ENST00000340660 IFI44LQ53G44 452 aa7.45□□□□□ -1.22
ATXN3-201ENST00000340660 AGKQ53H12 422 aa7.45□□□□□ -1.22
ATXN3-201ENST00000340660 SSX9Q7RTT3 188 aa7.45□□□□□ -1.22
ATXN3-201ENST00000340660 TTC9CQ8N5M4 171 aa7.45□□□□□ -1.22
ATXN3-201ENST00000340660 TM2D1Q9BX74 207 aa7.45□□□□□ -1.22
ATXN3-201ENST00000340660 MROQ9BYG7 248 aa7.45□□□□□ -1.22
ATXN3-201ENST00000340660 SMPD3Q9NY59 655 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-201ENST00000340660 LAMP5Q9UJQ1 280 aa7.45□□□□□ -1.22
ATXN3-201ENST00000340660 OR52A1Q9UKL2 312 aa7.45□□□□□ -1.22
ATXN3-201ENST00000340660 IGHV3OR16-8A0A075B7F1 116 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms