RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 MMP7P09237 267 aaPredicted RBP10.8□□□□□ -0.68
LIN54-201ENST00000340417 ZNF137PP52743 207 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 BRD3OSQ6XYD6 125 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 PDPNQ86YL7 162 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 PAQR4Q8N4S7 273 aaPredicted RBP10.8□□□□□ -0.68
LIN54-201ENST00000340417 DRAM1Q8N682 238 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 OR13A1Q8NGR1 328 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 YIPF5Q969M3 257 aa10.8□□□□□ -0.68
LIN54-201ENST00000340417 MSMBP08118 114 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 WNT2P09544 360 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 HIST1H1BP16401 226 aaKnown RBP10.79□□□□□ -0.68
LIN54-201ENST00000340417 AGAP20933 346 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 COMPP49747 757 aaPredicted RBP10.79□□□□□ -0.68
LIN54-201ENST00000340417 C10orf113Q5VZT2 155 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 WDR25Q64LD2 544 aaPredicted RBP10.79□□□□□ -0.68
LIN54-201ENST00000340417 RELL2Q8NC24 303 aaPredicted RBP10.79□□□□□ -0.68
LIN54-201ENST00000340417 CABLES2Q9BTV7 478 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 QTRT1Q9BXR0 403 aaKnown RBP10.79□□□□□ -0.68
LIN54-201ENST00000340417 PTBP3O95758 552 aaKnown RBP10.79□□□□□ -0.68
LIN54-201ENST00000340417 REG1AP05451 166 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 HIST1H1EP10412 219 aaKnown RBP10.79□□□□□ -0.68
LIN54-201ENST00000340417 CCDC28AQ8IWP9 274 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 PATZ1Q9HBE1 687 aaKnown RBP10.79□□□□□ -0.68
LIN54-201ENST00000340417 HIGD1AQ9Y241 93 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 HAGHQ16775 308 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 ABHD1Q96SE0 405 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 TMEM140Q9NV12 185 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 A0A1B0GU03 582 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 UBE2L3P68036 154 aaKnown RBP10.79□□□□□ -0.68
LIN54-201ENST00000340417 H3F3AP84243 136 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 SOHLH1Q5JUK2 328 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 HIST2H3AQ71DI3 136 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 OR2C3Q8N628 320 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 RAX2Q96IS3 184 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 FAM215AQ9Y5M1 114 aa10.79□□□□□ -0.68
LIN54-201ENST00000340417 AARDQ4LEZ3 155 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 RPL39P5Q59GN2 51 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 CLEC18BQ6UXF7 455 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 NPAP1Q9NZP6 1156 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 HELZP42694 1942 aaKnown RBP10.78□□□□□ -0.68
LIN54-201ENST00000340417 PQLC2LA1A4F0 135 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 CHEK1O14757 476 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 DEFB121Q5J5C9 76 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 STPG3Q8N7X2 389 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 GTF3AQ92664 365 aaKnown RBP10.78□□□□□ -0.68
LIN54-201ENST00000340417 ZMAT5Q9UDW3 170 aaKnown RBP10.78□□□□□ -0.68
LIN54-201ENST00000340417 BOLA2-SMG1P6H3BVE0 249 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 CTRB1P17538 263 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 RPL7L1Q6DKI1 246 aaKnown RBP10.78□□□□□ -0.68
LIN54-201ENST00000340417 CTRB2Q6GPI1 263 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 FAM169BQ8N8A8 192 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 NIPSNAP3BQ9BS92 247 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 PEMTQ9UBM1 199 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 C12orf77C9JDV5 145 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 ATP6V1G1O75348 118 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 OR2J3O76001 311 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 TMEM50BP56557 158 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 ZNRF4Q8WWF5 429 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 ARPC1AQ92747 370 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 WDFY2Q96P53 400 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 DMRTC2Q8IXT2 367 aaPredicted RBP10.78□□□□□ -0.68
LIN54-201ENST00000340417 OR5B3Q8NH48 314 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 LSM10Q969L4 123 aaKnown RBP10.78□□□□□ -0.68
LIN54-201ENST00000340417 C19orf12Q9NSK7 152 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 KCNK7Q9Y2U2 307 aa10.78□□□□□ -0.68
LIN54-201ENST00000340417 CTDSPLO15194 276 aa10.77□□□□□ -0.68
LIN54-201ENST00000340417 TNFSF13O75888 250 aa10.77□□□□□ -0.68
LIN54-201ENST00000340417 GATA3P23771 443 aa10.77□□□□□ -0.68
LIN54-201ENST00000340417 ZNF331Q9NQX6 463 aaPredicted RBP10.77□□□□□ -0.68
LIN54-201ENST00000340417 TRAV30A0A087WSZ9 112 aa10.77□□□□□ -0.68
LIN54-201ENST00000340417 SIGLEC5O15389 551 aa10.77□□□□□ -0.68
LIN54-201ENST00000340417 RAB32Q13637 225 aa10.77□□□□□ -0.68
LIN54-201ENST00000340417 IGFL2Q6UWQ7 119 aa10.77□□□□□ -0.68
LIN54-201ENST00000340417 A0A1W2PNU3 283 aaPredicted RBP10.77□□□□□ -0.69
LIN54-201ENST00000340417 CR1LQ2VPA4 569 aa10.77□□□□□ -0.69
LIN54-201ENST00000340417 MOGAT2Q3SYC2 334 aa10.77□□□□□ -0.69
LIN54-201ENST00000340417 TXN2Q99757 166 aa10.77□□□□□ -0.69
LIN54-201ENST00000340417 KLHDC3Q9BQ90 382 aa10.77□□□□□ -0.69
LIN54-201ENST00000340417 ZNF318Q5VUA4 2279 aa10.77□□□□□ -0.69
LIN54-201ENST00000340417 HEATR5BQ9P2D3 2071 aa10.77□□□□□ -0.69
LIN54-201ENST00000340417 DEFB113Q30KQ7 82 aa10.77□□□□□ -0.69
LIN54-201ENST00000340417 LYPD3O95274 346 aa10.77□□□□□ -0.69
LIN54-201ENST00000340417 CD24P25063 80 aa10.77□□□□□ -0.69
LIN54-201ENST00000340417 TMED6Q8WW62 240 aa10.77□□□□□ -0.69
LIN54-201ENST00000340417 WDR89Q96FK6 387 aaPredicted RBP10.77□□□□□ -0.69
LIN54-201ENST00000340417 REG4Q9BYZ8 158 aa10.77□□□□□ -0.69
LIN54-201ENST00000340417 TECRQ9NZ01 308 aaKnown RBP10.77□□□□□ -0.69
LIN54-201ENST00000340417 DBX1A6NMT0 343 aa10.76□□□□□ -0.69
LIN54-201ENST00000340417 TFF1P04155 84 aa10.76□□□□□ -0.69
LIN54-201ENST00000340417 OR4B1Q8NGF8 309 aa10.76□□□□□ -0.69
LIN54-201ENST00000340417 RPUSD4Q96CM3 377 aaKnown RBP10.76□□□□□ -0.69
LIN54-201ENST00000340417 A0A0G2JK05 382 aa10.76□□□□□ -0.69
LIN54-201ENST00000340417 ADAP1O75689 374 aa10.76□□□□□ -0.69
LIN54-201ENST00000340417 IGHV3-11P01762 117 aa10.76□□□□□ -0.69
LIN54-201ENST00000340417 SPCS3P61009 180 aa10.76□□□□□ -0.69
LIN54-201ENST00000340417 LYZL2Q7Z4W2 148 aa10.76□□□□□ -0.69
LIN54-201ENST00000340417 ZFP82Q8N141 532 aa10.76□□□□□ -0.69
LIN54-201ENST00000340417 ZNF738Q8NE65 137 aa10.76□□□□□ -0.69
LIN54-201ENST00000340417 ASB13Q8WXK3 278 aa10.76□□□□□ -0.69
LIN54-201ENST00000340417 WDR61Q9GZS3 305 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms