RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ZNF787Q6DD87 383 aa13.62□□□□□ -0.23
LITAF-201ENST00000339430 UNKLQ9H9P5 680 aaKnown RBP13.62□□□□□ -0.23
LITAF-201ENST00000339430 CLN8Q9UBY8 286 aa13.62□□□□□ -0.23
LITAF-201ENST00000339430 IGHV1-18A0A0C4DH31 117 aa13.61□□□□□ -0.23
LITAF-201ENST00000339430 CD55P08174 381 aa13.61□□□□□ -0.23
LITAF-201ENST00000339430 ACAA1P09110 424 aaPredicted RBP13.61□□□□□ -0.23
LITAF-201ENST00000339430 DLK1P80370 383 aa13.61□□□□□ -0.23
LITAF-201ENST00000339430 SLC38A11Q08AI6 406 aa13.61□□□□□ -0.23
LITAF-201ENST00000339430 LRRC75BQ2VPJ9 315 aa13.61□□□□□ -0.23
LITAF-201ENST00000339430 ZNF718Q3SXZ3 478 aa13.61□□□□□ -0.23
LITAF-201ENST00000339430 IGHV2OR16-5A0A0B4J2B6 119 aa13.61□□□□□ -0.23
LITAF-201ENST00000339430 LOC102723971A0A1B0GUV8 181 aa13.61□□□□□ -0.23
LITAF-201ENST00000339430 ODAMA1E959 279 aa13.61□□□□□ -0.23
LITAF-201ENST00000339430 IFNA4P05014 189 aa13.61□□□□□ -0.23
LITAF-201ENST00000339430 BRWD1-AS2P59051 145 aa13.61□□□□□ -0.23
LITAF-201ENST00000339430 SPINK9Q5DT21 86 aa13.61□□□□□ -0.23
LITAF-201ENST00000339430 ZNF343Q6P1L6 599 aa13.61□□□□□ -0.23
LITAF-201ENST00000339430 SFXN3Q9BWM7 321 aa13.61□□□□□ -0.23
LITAF-201ENST00000339430 WDR61Q9GZS3 305 aaKnown RBP13.61□□□□□ -0.23
LITAF-201ENST00000339430 C5orf52A6NGY3 159 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 ST8SIA5O15466 376 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 HOXB1P14653 301 aaPredicted RBP13.6□□□□□ -0.23
LITAF-201ENST00000339430 BMP5P22003 454 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 RAB11AP62491 216 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 KHDC3LQ587J8 217 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 BEND4Q6ZU67 534 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 IQCF2Q8IXL9 164 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 C1orf162Q8NEQ5 155 aaPredicted RBP13.6□□□□□ -0.23
LITAF-201ENST00000339430 OR2Z1Q8NG97 314 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 LRRC29Q8WV35 223 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 ZDHHC16Q969W1 377 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 RCC1LQ96I51 464 aaKnown RBP13.6□□□□□ -0.23
LITAF-201ENST00000339430 NIPSNAP3BQ9BS92 247 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 URGCP-MRPS24S4R325 110 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 CADP27708 2225 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 A0A0G2JNJ9 132 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 KITLGP21583 273 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 EIF4EBP1Q13541 118 aaPredicted RBP13.6□□□□□ -0.23
LITAF-201ENST00000339430 ZNF474Q6S9Z5 364 aaPredicted RBP13.6□□□□□ -0.23
LITAF-201ENST00000339430 RBMS3Q6XE24 437 aaKnown RBP13.6□□□□□ -0.23
LITAF-201ENST00000339430 CD177Q8N6Q3 437 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 Q9UFV3 132 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 DUSP13Q9UII6 198 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 PSG11Q9UQ72 335 aa13.6□□□□□ -0.23
LITAF-201ENST00000339430 LINC00473A8K010 186 aa13.59□□□□□ -0.23
LITAF-201ENST00000339430 RBMXL2O75526 392 aaKnown RBP13.59□□□□□ -0.23
LITAF-201ENST00000339430 MEOX2P50222 304 aa13.59□□□□□ -0.23
LITAF-201ENST00000339430 FABP9Q0Z7S8 132 aa13.59□□□□□ -0.23
LITAF-201ENST00000339430 CATR1Q13166 79 aa13.59□□□□□ -0.23
LITAF-201ENST00000339430 P2RY6Q15077 328 aa13.59□□□□□ -0.23
LITAF-201ENST00000339430 SMIM21Q3B7S5 101 aa13.59□□□□□ -0.23
LITAF-201ENST00000339430 Q3ZCU0 254 aa13.59□□□□□ -0.23
LITAF-201ENST00000339430 LRP11Q86VZ4 500 aa13.59□□□□□ -0.23
LITAF-201ENST00000339430 TAF15Q92804 592 aaKnown RBP eCLIP13.59□□□□□ -0.23
LITAF-201ENST00000339430 MUCL1Q96DR8 90 aa13.59□□□□□ -0.23
LITAF-201ENST00000339430 TVP23CQ96ET8 276 aa13.59□□□□□ -0.23
LITAF-201ENST00000339430 PSMG3Q9BT73 122 aaPredicted RBP13.59□□□□□ -0.23
LITAF-201ENST00000339430 HSPB7Q9UBY9 170 aa13.59□□□□□ -0.23
LITAF-201ENST00000339430 HMGB3O15347 200 aaKnown RBP13.59□□□□□ -0.23
LITAF-201ENST00000339430 PPIHO43447 177 aaKnown RBP13.59□□□□□ -0.23
LITAF-201ENST00000339430 EGR1P18146 543 aa13.59□□□□□ -0.23
LITAF-201ENST00000339430 BHLHA15Q7RTS1 189 aaPredicted RBP13.59□□□□□ -0.23
LITAF-201ENST00000339430 ZBTB34Q8NCN2 500 aa13.59□□□□□ -0.23
LITAF-201ENST00000339430 PRR7Q8TB68 274 aa13.59□□□□□ -0.23
LITAF-201ENST00000339430 YPEL4Q96NS1 127 aa13.59□□□□□ -0.23
LITAF-201ENST00000339430 TRAV1-1A0A0B4J248 108 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 TRGV8A0A0C4DH27 118 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 LRRC30A6NM36 301 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 FAM90A26D6RGX4 464 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 ZG16O60844 167 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 IGLV1-44P01699 117 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 TLE1Q04724 770 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 MSMO1Q15800 293 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 MSMPQ1L6U9 139 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 TMEM14EPQ6UXP3 125 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 SMG1Q96Q15 3661 aaKnown RBP13.58□□□□□ -0.24
LITAF-201ENST00000339430 IGHV3OR15-7A0A075B7D8 119 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 IGHV3-13P01766 116 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 IGHV3-7P01780 117 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 BCL2P10415 239 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 NQO2P16083 231 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 RPS10P46783 165 aaKnown RBP13.58□□□□□ -0.24
LITAF-201ENST00000339430 ZNF83P51522 516 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 TMEM41BQ5BJD5 291 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 HEPN1Q6WQI6 88 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 HIPK2Q9H2X6 1198 aa13.58□□□□□ -0.24
LITAF-201ENST00000339430 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.58□□□□□ -0.24
LITAF-201ENST00000339430 HCFC1P51610 2035 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 UBE2CO00762 179 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 IGKV1D-33P01593 117 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 IGKV1-33P01594 117 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 P0C879 139 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 SPRNQ5BIV9 151 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 ST6GALNAC3Q8NDV1 305 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 NBASA2RRP1 2371 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 USP24Q9UPU5 2620 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 COL6A6A6NMZ7 2263 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 ICE1Q9Y2F5 2266 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 KALRNO60229 2985 aa13.57□□□□□ -0.24
LITAF-201ENST00000339430 MAP1LC3B2A6NCE7 125 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms