RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 SPATA46Q5T0L3 261 aa15.83■□□□□ 0.12
PSPC1-201ENST00000338910 GBGT1Q8N5D6 347 aa15.83■□□□□ 0.12
PSPC1-201ENST00000338910 LHX4Q969G2 390 aa15.83■□□□□ 0.12
PSPC1-201ENST00000338910 HS3ST6Q96QI5 342 aa15.83■□□□□ 0.12
PSPC1-201ENST00000338910 ATMQ13315 3056 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 FAM90A10PA6NDY2 464 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 FAM90A18PA6NE21 464 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 FAM90A16PA6NEW6 464 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 FAM90A20PA6NIJ5 464 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 FAM90A8PA6NJQ4 464 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 FAM90A7PA6NKC0 464 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 FAM90A22PA8MWA6 464 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 FAM90A12PA8MX19 464 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 FAM90A5PA8MXJ8 464 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 FAM90A23PA8MXZ1 464 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 APC2O95996 2303 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 FAM90A15PP0C7V4 464 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 FAM90A13PP0C7W8 464 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 FAM90A14PP0C7W9 464 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 FAM90A24PP0C7X0 464 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 ELLP55199 621 aaPredicted RBP15.82■□□□□ 0.12
PSPC1-201ENST00000338910 WDR61Q9GZS3 305 aaKnown RBP15.82■□□□□ 0.12
PSPC1-201ENST00000338910 OR51I2Q9H344 312 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 ZNF25P17030 456 aaPredicted RBP15.82■□□□□ 0.12
PSPC1-201ENST00000338910 BPIFB3P59826 476 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 CISD2Q8N5K1 135 aaKnown RBP15.82■□□□□ 0.12
PSPC1-201ENST00000338910 RPP25LQ8N5L8 163 aaKnown RBP15.82■□□□□ 0.12
PSPC1-201ENST00000338910 OR2T10Q8NGZ9 312 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 PARLQ9H300 379 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 GP6Q9HCN6 339 aa15.82■□□□□ 0.12
PSPC1-201ENST00000338910 POLR3KQ9Y2Y1 108 aaPredicted RBP15.82■□□□□ 0.12
PSPC1-201ENST00000338910 SYNGR2O43760 224 aa15.81■□□□□ 0.12
PSPC1-201ENST00000338910 LYZL6O75951 148 aa15.81■□□□□ 0.12
PSPC1-201ENST00000338910 CELA3BP08861 270 aa15.81■□□□□ 0.12
PSPC1-201ENST00000338910 IAPPP10997 89 aa15.81■□□□□ 0.12
PSPC1-201ENST00000338910 MYPOPQ86VE0 399 aaPredicted RBP15.81■□□□□ 0.12
PSPC1-201ENST00000338910 CNEP1R1Q8N9A8 125 aa15.81■□□□□ 0.12
PSPC1-201ENST00000338910 NANOS1Q8WY41 292 aaKnown RBP15.81■□□□□ 0.12
PSPC1-201ENST00000338910 ANAPC16Q96DE5 110 aa15.81■□□□□ 0.12
PSPC1-201ENST00000338910 FKBP11Q9NYL4 201 aa15.81■□□□□ 0.12
PSPC1-201ENST00000338910 PSENENQ9NZ42 101 aa15.81■□□□□ 0.12
PSPC1-201ENST00000338910 CLCF1Q9UBD9 225 aa15.81■□□□□ 0.12
PSPC1-201ENST00000338910 CACNA1GO43497 2377 aa15.81■□□□□ 0.12
PSPC1-201ENST00000338910 KIR2DS1A0A191URI9 304 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 IFNL4K9M1U5 179 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 IGKV1D-33P01593 117 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 IGKV1-33P01594 117 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 IGHV1-2P23083 117 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 KIR2DS4P43632 304 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 HBG1P69891 147 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 HBG2P69892 147 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 KIR2DS1Q14954 304 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 FAM180AQ6UWF9 173 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 MRPL30Q8TCC3 161 aaKnown RBP15.8■□□□□ 0.12
PSPC1-201ENST00000338910 PARD6GQ9BYG4 376 aaPredicted RBP15.8■□□□□ 0.12
PSPC1-201ENST00000338910 SLC39A9Q9NUM3 307 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 MTCH1Q9NZJ7 389 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 ATP23Q9Y6H3 246 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 SOX15O60248 233 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 CTXN2P0C2S0 81 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 PSG2P11465 335 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 TLE1Q04724 770 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 IGFBP7Q16270 282 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 PCSK4Q6UW60 755 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 OR4C12Q96R67 309 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 IL36RNQ9UBH0 155 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 CACNG5Q9UF02 275 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 ACACAQ13085 2346 aa15.8■□□□□ 0.12
PSPC1-201ENST00000338910 MARCH11A6NNE9 402 aa15.79■□□□□ 0.12
PSPC1-201ENST00000338910 SERPINE2P07093 398 aa15.79■□□□□ 0.12
PSPC1-201ENST00000338910 CNN1P51911 297 aaKnown RBP15.79■□□□□ 0.12
PSPC1-201ENST00000338910 ZADH2Q8N4Q0 377 aa15.79■□□□□ 0.12
PSPC1-201ENST00000338910 OR51H1Q8NH63 302 aa15.79■□□□□ 0.12
PSPC1-201ENST00000338910 TAAR6Q96RI8 345 aa15.79■□□□□ 0.12
PSPC1-201ENST00000338910 ANKRD30BLA7E2S9 258 aa15.79■□□□□ 0.12
PSPC1-201ENST00000338910 C3orf80F5H4A9 247 aa15.79■□□□□ 0.12
PSPC1-201ENST00000338910 SYNGR1O43759 233 aa15.79■□□□□ 0.12
PSPC1-201ENST00000338910 SCGB1D1O95968 90 aa15.79■□□□□ 0.12
PSPC1-201ENST00000338910 SRP14P37108 136 aaKnown RBP15.79■□□□□ 0.12
PSPC1-201ENST00000338910 FAM214BQ7L5A3 538 aa15.79■□□□□ 0.12
PSPC1-201ENST00000338910 OR5A2Q8NGI9 324 aa15.79■□□□□ 0.12
PSPC1-201ENST00000338910 TAF15Q92804 592 aaKnown RBP eCLIP15.79■□□□□ 0.12
PSPC1-201ENST00000338910 WFIKKN1Q96NZ8 548 aa15.79■□□□□ 0.12
PSPC1-201ENST00000338910 PIGBOS1A0A0B4J2F0 54 aa15.78■□□□□ 0.12
PSPC1-201ENST00000338910 IGKV1-39P01597 117 aa15.78■□□□□ 0.12
PSPC1-201ENST00000338910 IGKV1D-39P04432 117 aa15.78■□□□□ 0.12
PSPC1-201ENST00000338910 CA6P23280 308 aa15.78■□□□□ 0.12
PSPC1-201ENST00000338910 PSMB3P49720 205 aa15.78■□□□□ 0.12
PSPC1-201ENST00000338910 UBE2NP61088 152 aaKnown RBP15.78■□□□□ 0.12
PSPC1-201ENST00000338910 OR5P3Q8WZ94 311 aa15.78■□□□□ 0.12
PSPC1-201ENST00000338910 CBY1Q9Y3M2 126 aa15.78■□□□□ 0.12
PSPC1-201ENST00000338910 HSPB6O14558 160 aa15.78■□□□□ 0.12
PSPC1-201ENST00000338910 TGFBR3Q03167 851 aa15.78■□□□□ 0.12
PSPC1-201ENST00000338910 ZNF488Q96MN9 340 aa15.78■□□□□ 0.12
PSPC1-201ENST00000338910 TRAPPC2LH3BP13 241 aa15.77■□□□□ 0.12
PSPC1-201ENST00000338910 AQP7O14520 342 aa15.77■□□□□ 0.12
PSPC1-201ENST00000338910 S100GP29377 79 aa15.77■□□□□ 0.12
PSPC1-201ENST00000338910 PLA2G5P39877 138 aa15.77■□□□□ 0.12
PSPC1-201ENST00000338910 TBC1D28Q2M2D7 210 aa15.77■□□□□ 0.12
PSPC1-201ENST00000338910 LSM10Q969L4 123 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms