RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 CBR3O75828 277 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 KRASP01116 189 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 ATP6V1FQ16864 119 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 WDR74Q6RFH5 385 aaPredicted RBP17.17■□□□□ 0.34
RUNX3-202ENST00000338888 TMPRSS7Q7RTY8 843 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 BAGE3Q86Y29 109 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 BAGE2Q86Y30 109 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 FOXJ2Q9P0K8 574 aa17.17■□□□□ 0.34
RUNX3-202ENST00000338888 ESPL1Q14674 2120 aa17.16■□□□□ 0.34
RUNX3-202ENST00000338888 TRBV20OR9-2A0A075B6H5 130 aa17.16■□□□□ 0.34
RUNX3-202ENST00000338888 TRAV38-1A0A0B4J264 116 aa17.16■□□□□ 0.34
RUNX3-202ENST00000338888 F6UZH7 168 aa17.16■□□□□ 0.34
RUNX3-202ENST00000338888 COMPP49747 757 aaPredicted RBP17.16■□□□□ 0.34
RUNX3-202ENST00000338888 TMEM204Q9BSN7 226 aa17.16■□□□□ 0.34
RUNX3-202ENST00000338888 PMS2P5A8MQ11 134 aa17.16■□□□□ 0.34
RUNX3-202ENST00000338888 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.16■□□□□ 0.34
RUNX3-202ENST00000338888 CXCL12P48061 93 aa17.16■□□□□ 0.34
RUNX3-202ENST00000338888 CARD18P57730 90 aa17.16■□□□□ 0.34
RUNX3-202ENST00000338888 NXPH1P58417 271 aa17.16■□□□□ 0.34
RUNX3-202ENST00000338888 RAC3P60763 192 aa17.16■□□□□ 0.34
RUNX3-202ENST00000338888 FBXW9Q5XUX1 488 aa17.16■□□□□ 0.34
RUNX3-202ENST00000338888 CIB3Q96Q77 187 aaPredicted RBP17.16■□□□□ 0.34
RUNX3-202ENST00000338888 FAM103A1Q9BTL3 118 aaKnown RBP17.16■□□□□ 0.34
RUNX3-202ENST00000338888 PRDM14Q9GZV8 571 aa17.16■□□□□ 0.34
RUNX3-202ENST00000338888 MRPL18Q9H0U6 180 aaKnown RBP17.16■□□□□ 0.34
RUNX3-202ENST00000338888 ZNF552Q9H707 407 aaPredicted RBP17.16■□□□□ 0.34
RUNX3-202ENST00000338888 DLL3Q9NYJ7 618 aa17.16■□□□□ 0.34
RUNX3-202ENST00000338888 RNF114Q9Y508 228 aa17.16■□□□□ 0.34
RUNX3-202ENST00000338888 DMDP11532 3685 aa17.15■□□□□ 0.34
RUNX3-202ENST00000338888 ZNF716A6NP11 495 aa17.15■□□□□ 0.34
RUNX3-202ENST00000338888 FAM90A26D6RGX4 464 aa17.15■□□□□ 0.34
RUNX3-202ENST00000338888 G6PCP35575 357 aa17.15■□□□□ 0.34
RUNX3-202ENST00000338888 YRDCQ86U90 279 aaKnown RBP17.15■□□□□ 0.34
RUNX3-202ENST00000338888 ZDHHC16Q969W1 377 aa17.15■□□□□ 0.34
RUNX3-202ENST00000338888 SLC35E1Q96K37 410 aa17.15■□□□□ 0.34
RUNX3-202ENST00000338888 C19orf25Q9UFG5 118 aaPredicted RBP17.15■□□□□ 0.34
RUNX3-202ENST00000338888 TRBV6-6A0A0A6YYG2 114 aa17.15■□□□□ 0.34
RUNX3-202ENST00000338888 DEGS1O15121 323 aa17.15■□□□□ 0.34
RUNX3-202ENST00000338888 CXCL13O43927 109 aa17.15■□□□□ 0.34
RUNX3-202ENST00000338888 ZG16O60844 167 aa17.15■□□□□ 0.34
RUNX3-202ENST00000338888 ZNF90Q03938 601 aa17.15■□□□□ 0.34
RUNX3-202ENST00000338888 SPINK9Q5DT21 86 aa17.15■□□□□ 0.34
RUNX3-202ENST00000338888 MRPL21Q7Z2W9 205 aaKnown RBP17.15■□□□□ 0.34
RUNX3-202ENST00000338888 DRAM1Q8N682 238 aa17.15■□□□□ 0.34
RUNX3-202ENST00000338888 HSPB7Q9UBY9 170 aa17.15■□□□□ 0.34
RUNX3-202ENST00000338888 SIT1Q9Y3P8 196 aa17.15■□□□□ 0.34
RUNX3-202ENST00000338888 RAMP3O60896 148 aa17.14■□□□□ 0.33
RUNX3-202ENST00000338888 KRTDAPP60985 99 aa17.14■□□□□ 0.33
RUNX3-202ENST00000338888 C9orf135Q5VTT2 229 aa17.14■□□□□ 0.33
RUNX3-202ENST00000338888 SLC25A45Q8N413 288 aa17.14■□□□□ 0.33
RUNX3-202ENST00000338888 COLCA1Q6ZS62 124 aa17.14■□□□□ 0.33
RUNX3-202ENST00000338888 DEFB123Q8N688 67 aa17.14■□□□□ 0.33
RUNX3-202ENST00000338888 PCED1AQ9H1Q7 454 aa17.14■□□□□ 0.33
RUNX3-202ENST00000338888 FBXL7Q9UJT9 491 aa17.14■□□□□ 0.33
RUNX3-202ENST00000338888 WIPI2Q9Y4P8 454 aa17.14■□□□□ 0.33
RUNX3-202ENST00000338888 ESDP10768 282 aa17.13■□□□□ 0.33
RUNX3-202ENST00000338888 IGFBP7Q16270 282 aa17.13■□□□□ 0.33
RUNX3-202ENST00000338888 ARL6IP6Q8N6S5 226 aa17.13■□□□□ 0.33
RUNX3-202ENST00000338888 OR10G8Q8NGN5 311 aa17.13■□□□□ 0.33
RUNX3-202ENST00000338888 LNP1A1A4G5 178 aa17.13■□□□□ 0.33
RUNX3-202ENST00000338888 FRMD6-AS1P0C7T7 363 aa17.13■□□□□ 0.33
RUNX3-202ENST00000338888 ZNF816Q0VGE8 651 aaPredicted RBP17.13■□□□□ 0.33
RUNX3-202ENST00000338888 STPG4Q8N801 248 aa17.13■□□□□ 0.33
RUNX3-202ENST00000338888 OCC1Q8TAD7 63 aa17.13■□□□□ 0.33
RUNX3-202ENST00000338888 KCNIP2Q9NS61 270 aa17.13■□□□□ 0.33
RUNX3-202ENST00000338888 C5orf49A4QMS7 147 aa17.12■□□□□ 0.33
RUNX3-202ENST00000338888 SLC17A3O00476 420 aa17.12■□□□□ 0.33
RUNX3-202ENST00000338888 A0A096LPE4 126 aa17.12■□□□□ 0.33
RUNX3-202ENST00000338888 A0A1W2PPZ6 126 aa17.12■□□□□ 0.33
RUNX3-202ENST00000338888 ODAMA1E959 279 aa17.12■□□□□ 0.33
RUNX3-202ENST00000338888 K7ESF4 209 aa17.12■□□□□ 0.33
RUNX3-202ENST00000338888 SYNGR4O95473 234 aa17.12■□□□□ 0.33
RUNX3-202ENST00000338888 TIMP3P35625 211 aa17.12■□□□□ 0.33
RUNX3-202ENST00000338888 FAM58AQ8N1B3 248 aa17.12■□□□□ 0.33
RUNX3-202ENST00000338888 RARRES3Q9UL19 164 aa17.12■□□□□ 0.33
RUNX3-202ENST00000338888 TRAPPC2LQ9UL33 140 aa17.12■□□□□ 0.33
RUNX3-202ENST00000338888 EDDM3BP56851 147 aa17.11■□□□□ 0.33
RUNX3-202ENST00000338888 RNASE8Q8TDE3 154 aaKnown RBP17.11■□□□□ 0.33
RUNX3-202ENST00000338888 FRYLO94915 3013 aa17.11■□□□□ 0.33
RUNX3-202ENST00000338888 ADAMTS20P59510 1910 aa17.11■□□□□ 0.33
RUNX3-202ENST00000338888 KIAA1549Q9HCM3 1950 aa17.11■□□□□ 0.33
RUNX3-202ENST00000338888 LRRC30A6NM36 301 aa17.11■□□□□ 0.33
RUNX3-202ENST00000338888 GJE1A6NN92 205 aa17.11■□□□□ 0.33
RUNX3-202ENST00000338888 C17orf112F2Z3M2 114 aa17.11■□□□□ 0.33
RUNX3-202ENST00000338888 FCN1O00602 326 aa17.11■□□□□ 0.33
RUNX3-202ENST00000338888 NDUFB8O95169 186 aa17.11■□□□□ 0.33
RUNX3-202ENST00000338888 PCOLCEQ15113 449 aa17.11■□□□□ 0.33
RUNX3-202ENST00000338888 KRTCAP3Q53RY4 240 aa17.11■□□□□ 0.33
RUNX3-202ENST00000338888 SIGLECL1Q8N7X8 197 aa17.11■□□□□ 0.33
RUNX3-202ENST00000338888 CEP192Q8TEP8 1941 aa17.11■□□□□ 0.33
RUNX3-202ENST00000338888 A0A1W2PPV4 95 aa17.1■□□□□ 0.33
RUNX3-202ENST00000338888 DIRC3C9JPN6 131 aa17.1■□□□□ 0.33
RUNX3-202ENST00000338888 NGFP01138 241 aa17.1■□□□□ 0.33
RUNX3-202ENST00000338888 SERPINA7P05543 415 aa17.1■□□□□ 0.33
RUNX3-202ENST00000338888 EPHA8P29322 1005 aaPredicted RBP17.1■□□□□ 0.33
RUNX3-202ENST00000338888 IER3P46695 156 aa17.1■□□□□ 0.33
RUNX3-202ENST00000338888 AGBL5Q8NDL9 886 aa17.1■□□□□ 0.33
RUNX3-202ENST00000338888 OR1L6Q8NGR2 347 aa17.1■□□□□ 0.33
RUNX3-202ENST00000338888 SCO2A0A1W2PP80 73 aa17.1■□□□□ 0.33
RUNX3-202ENST00000338888 C20orf202A1L168 122 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms