RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 PDPNQ86YL7 162 aa11.94□□□□□ -0.5
PRKN-201ENST00000338468 DDB2Q92466 427 aa11.94□□□□□ -0.5
PRKN-201ENST00000338468 GON7Q9BXV9 100 aa11.94□□□□□ -0.5
PRKN-201ENST00000338468 DIABLOQ9NR28 239 aa11.94□□□□□ -0.5
PRKN-201ENST00000338468 TPSG1Q9NRR2 321 aa11.94□□□□□ -0.5
PRKN-201ENST00000338468 ZFP57Q9NU63 452 aa11.94□□□□□ -0.5
PRKN-201ENST00000338468 KIAA1456Q9P272 454 aa11.94□□□□□ -0.5
PRKN-201ENST00000338468 WSB1Q9Y6I7 421 aa11.94□□□□□ -0.5
PRKN-201ENST00000338468 IGKV1D-13A0A0B4J2D9 117 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 J3QRK9 145 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 XRCC3O43542 346 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 TUSC2O75896 110 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 IGLV2-23P01705 113 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 HLA-DQB1P01920 261 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 CTXN2P0C2S0 81 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 IGKV1-13P0DP09 117 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 VDAC1P21796 283 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 PSMB8P28062 276 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 DUTP33316 252 aaKnown RBP11.93□□□□□ -0.5
PRKN-201ENST00000338468 CX3CL1P78423 397 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 CTF1Q16619 201 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 OXLD1Q5BKU9 147 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 UBE2NLQ5JXB2 153 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 C8orf86Q6ZUL3 223 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 HOGA1Q86XE5 327 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 SAMD12Q8N8I0 201 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 PARP11Q9NR21 331 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 SLC35D1Q9NTN3 355 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 OR2W1Q9Y3N9 320 aa11.93□□□□□ -0.5
PRKN-201ENST00000338468 SRRM4A7MD48 611 aaKnown RBP11.92□□□□□ -0.5
PRKN-201ENST00000338468 LINC00473A8K010 186 aa11.92□□□□□ -0.5
PRKN-201ENST00000338468 GABARAPO95166 117 aa11.92□□□□□ -0.5
PRKN-201ENST00000338468 SPDEFO95238 335 aa11.92□□□□□ -0.5
PRKN-201ENST00000338468 APOA2P02652 100 aa11.92□□□□□ -0.5
PRKN-201ENST00000338468 PRB2P02812 416 aaPredicted RBP11.92□□□□□ -0.5
PRKN-201ENST00000338468 CRYGBP07316 175 aa11.92□□□□□ -0.5
PRKN-201ENST00000338468 ELANEP08246 267 aa11.92□□□□□ -0.5
PRKN-201ENST00000338468 ALDH3B2P48448 385 aa11.92□□□□□ -0.5
PRKN-201ENST00000338468 THBS3P49746 956 aa11.92□□□□□ -0.5
PRKN-201ENST00000338468 CRIP2P52943 208 aaPredicted RBP11.92□□□□□ -0.5
PRKN-201ENST00000338468 RPS16P62249 146 aaKnown RBP11.92□□□□□ -0.5
PRKN-201ENST00000338468 KIAA0141Q14154 515 aaPredicted RBP11.92□□□□□ -0.5
PRKN-201ENST00000338468 ANKRD13BQ86YJ7 626 aa11.92□□□□□ -0.5
PRKN-201ENST00000338468 LINC00482Q8N8I6 264 aa11.92□□□□□ -0.5
PRKN-201ENST00000338468 BEST4Q8NFU0 473 aa11.92□□□□□ -0.5
PRKN-201ENST00000338468 MYOZ3Q8TDC0 251 aa11.92□□□□□ -0.5
PRKN-201ENST00000338468 SNAPC3Q92966 411 aa11.92□□□□□ -0.5
PRKN-201ENST00000338468 FLYWCH2Q96CP2 140 aaKnown RBP11.92□□□□□ -0.5
PRKN-201ENST00000338468 TSNAXQ99598 290 aaKnown RBP11.92□□□□□ -0.5
PRKN-201ENST00000338468 KLK15Q9H2R5 256 aa11.92□□□□□ -0.5
PRKN-201ENST00000338468 METTL1Q9UBP6 276 aaKnown RBP11.92□□□□□ -0.5
PRKN-201ENST00000338468 RBM7Q9Y580 266 aaKnown RBP11.92□□□□□ -0.5
PRKN-201ENST00000338468 KMT2CQ8NEZ4 4911 aaKnown RBP11.91□□□□□ -0.5
PRKN-201ENST00000338468 TRAV41A0A0B4J266 112 aa11.91□□□□□ -0.5
PRKN-201ENST00000338468 IGLV1-40P01703 118 aa11.91□□□□□ -0.5
PRKN-201ENST00000338468 PF4P02776 101 aa11.91□□□□□ -0.5
PRKN-201ENST00000338468 EIF4EP06730 217 aaKnown RBP11.91□□□□□ -0.5
PRKN-201ENST00000338468 FCER2P06734 321 aa11.91□□□□□ -0.5
PRKN-201ENST00000338468 SSBP2P81877 361 aaPredicted RBP11.91□□□□□ -0.5
PRKN-201ENST00000338468 TMEM177Q53S58 311 aa11.91□□□□□ -0.5
PRKN-201ENST00000338468 CXorf66Q5JRM2 361 aaPredicted RBP11.91□□□□□ -0.5
PRKN-201ENST00000338468 ZNF660Q6AZW8 331 aaPredicted RBP11.91□□□□□ -0.5
PRKN-201ENST00000338468 ZNF695Q8IW36 515 aa11.91□□□□□ -0.5
PRKN-201ENST00000338468 MRPL41Q8IXM3 137 aaKnown RBP11.91□□□□□ -0.5
PRKN-201ENST00000338468 ZNF645Q8N7E2 425 aa11.91□□□□□ -0.5
PRKN-201ENST00000338468 MINDY2Q8NBR6 621 aa11.91□□□□□ -0.5
PRKN-201ENST00000338468 BVESQ8NE79 360 aa11.91□□□□□ -0.5
PRKN-201ENST00000338468 KLHL30-AS1Q8NEE0 82 aa11.91□□□□□ -0.5
PRKN-201ENST00000338468 MRAPQ8TCY5 172 aa11.91□□□□□ -0.5
PRKN-201ENST00000338468 KCTD12Q96CX2 325 aaKnown RBP11.91□□□□□ -0.5
PRKN-201ENST00000338468 S100A16Q96FQ6 103 aaKnown RBP11.91□□□□□ -0.5
PRKN-201ENST00000338468 CLCC1Q96S66 551 aa11.91□□□□□ -0.5
PRKN-201ENST00000338468 P2RX4Q99571 388 aa11.91□□□□□ -0.5
PRKN-201ENST00000338468 MRPS26Q9BYN8 205 aaKnown RBP11.91□□□□□ -0.5
PRKN-201ENST00000338468 MEIS3P1A6NDR6 274 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 NUDT19A8MXV4 375 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 ARPC1BO15143 372 aaKnown RBP11.9□□□□□ -0.5
PRKN-201ENST00000338468 SLC25A17O43808 307 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 SOX15O60248 233 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 OR5H8P0DN80 308 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 IGLL1P15814 213 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 CD33P20138 364 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 SLC6A1P30531 599 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 CDX1P47902 265 aaPredicted RBP11.9□□□□□ -0.5
PRKN-201ENST00000338468 LUMP51884 338 aaPredicted RBP11.9□□□□□ -0.5
PRKN-201ENST00000338468 TAS2R20P59543 309 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 RPL30P62888 115 aaKnown RBP11.9□□□□□ -0.5
PRKN-201ENST00000338468 EIF4EBP1Q13541 118 aaPredicted RBP11.9□□□□□ -0.5
PRKN-201ENST00000338468 PLGLAQ15195 96 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 MRGPRG-AS1Q2M3A8 158 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 GPR107Q5VW38 600 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 RAX2Q96IS3 184 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 DUX3Q96PT4 197 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 ANAPC10Q9UM13 185 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 RBMX2Q9Y388 322 aaKnown RBP11.9□□□□□ -0.5
PRKN-201ENST00000338468 NUBP2Q9Y5Y2 271 aa11.9□□□□□ -0.5
PRKN-201ENST00000338468 CA2P00918 260 aa11.89□□□□□ -0.51
PRKN-201ENST00000338468 LGALS7P47929 136 aa11.89□□□□□ -0.51
PRKN-201ENST00000338468 TAGLNQ01995 201 aaKnown RBP11.89□□□□□ -0.51
PRKN-201ENST00000338468 PJVKQ0ZLH3 352 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms