RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 SSSCA1O60232 199 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 SRIP30626 198 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 PTGDSP41222 190 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 LGALS4P56470 323 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 MAP1LC3AQ9H492 121 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 LYRM4Q9HD34 91 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 THSD7BQ9C0I4 1608 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 NUMA1Q14980 2115 aa7.31□□□□□ -1.24
TDP1-201ENST00000335725 SLC16A7O60669 478 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 KLF7O75840 302 aaPredicted RBP7.3□□□□□ -1.24
TDP1-201ENST00000335725 NEURL1O76050 574 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 DBIP07108 87 aaKnown RBP7.3□□□□□ -1.24
TDP1-201ENST00000335725 SMIM13P0DJ93 91 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 VSIG8P0DPA2 414 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 RGRP47804 291 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 UNC119Q13432 240 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 EBLN2Q6P2I7 272 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 PARM1Q6UWI2 310 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 DTX1Q86Y01 620 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 OR10G9Q8NGN4 311 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 ZNF480Q8WV37 535 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 SPON2Q9BUD6 331 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 KIF26AQ9ULI4 1882 aaPredicted RBP7.3□□□□□ -1.24
TDP1-201ENST00000335725 FCN3O75636 299 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 MT-ATP8P03928 68 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 SP9P0CG40 484 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 CT45A6P0DMU7 189 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 CT45A5P0DMU8 189 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 CT45A7P0DMV0 189 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 CT45A1Q5HYN5 189 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 WDR5BQ86VZ2 330 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 SYT8Q8NBV8 401 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 CT45A3Q8NHU0 189 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 CLDN23Q96B33 292 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 SOX21Q9Y651 276 aaPredicted RBP7.3□□□□□ -1.24
TDP1-201ENST00000335725 MYBPHLA2RUH7 354 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 M0QZQ0 153 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 LDB3O75112 727 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 VDAC2P45880 294 aaPredicted RBP7.3□□□□□ -1.24
TDP1-201ENST00000335725 TMEM78Q5T7P6 136 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 ATP6V0E2Q8NHE4 81 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 MRAPQ8TCY5 172 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 RAB37Q96AX2 223 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 AMELYQ99218 206 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 TM2D2Q9BX73 214 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 IL21Q9HBE4 155 aa7.3□□□□□ -1.24
TDP1-201ENST00000335725 CTXND1A0A1B0GTU2 59 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 C2orf70A6NJV1 201 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 G6PCP35575 357 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 CEACAM16Q2WEN9 425 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 ETDBQ3ZM63 59 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 OR4X2Q8NGF9 303 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 OR13C6PQ8NH95 151 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 OR1F12Q8NHA8 337 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 C10orf35Q96D05 121 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 SLC25A33Q9BSK2 321 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 POLDIP2Q9Y2S7 368 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 TMEM14DPA8MWL7 114 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 LYPD3O95274 346 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 ARL4DP49703 201 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 QRFPP83859 136 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 TNXAQ16473 311 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 FAM110CQ1W6H9 321 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 TIGITQ495A1 244 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 TTC32Q5I0X7 151 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 TMEM240Q5SV17 173 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 KCTD18Q6PI47 426 aaPredicted RBP7.29□□□□□ -1.24
TDP1-201ENST00000335725 TMEM136Q6ZRR5 245 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 Q8TCH9 128 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 SSC4DQ8WTU2 575 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 SOCS4Q8WXH5 440 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 TXNDC17Q9BRA2 123 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 ENY2Q9NPA8 101 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 PTRH2Q9Y3E5 179 aaKnown RBP7.29□□□□□ -1.24
TDP1-201ENST00000335725 hDV102S1A0JD36 115 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 CASTOR2A6NHX0 329 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 C11orf94C9JXX5 98 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 RPL8P62917 257 aaKnown RBP7.29□□□□□ -1.24
TDP1-201ENST00000335725 SP6Q3SY56 376 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 FAM69BQ5VUD6 431 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 NUP43Q8NFH3 380 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 OR9G4Q8NGQ1 327 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 KCNK17Q96T54 332 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 HES4Q9HCC6 221 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 KLRF1Q9NZS2 232 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 HEBP2Q9Y5Z4 205 aa7.29□□□□□ -1.24
TDP1-201ENST00000335725 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.28□□□□□ -1.24
TDP1-201ENST00000335725 A0A1W2PRD5 423 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 A0A1W2PRF3 423 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 A0A1W2PRM7 423 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 MBLAC1A4D2B0 266 aaPredicted RBP7.28□□□□□ -1.24
TDP1-201ENST00000335725 LIPT2A6NK58 231 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 OR7C1O76099 320 aaPredicted RBP7.28□□□□□ -1.24
TDP1-201ENST00000335725 HOXD9P28356 352 aaPredicted RBP7.28□□□□□ -1.24
TDP1-201ENST00000335725 ZNF121P58317 390 aaPredicted RBP7.28□□□□□ -1.24
TDP1-201ENST00000335725 ZXDAP98168 799 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 WFDC2Q14508 124 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 ZNF141Q15928 474 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 Q6AWC8 147 aa7.28□□□□□ -1.24
TDP1-201ENST00000335725 OR1L3Q8NH93 324 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms