RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 IGKV1-13P0DP09 117 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 CD33P20138 364 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 VDAC1P21796 283 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 PSMB8P28062 276 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 THBS3P49746 956 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 VBP1P61758 197 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 CX3CL1P78423 397 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 SSBP2P81877 361 aaPredicted RBP11.66□□□□□ -0.54
KATNA1-201ENST00000335643 FOXE3Q13461 319 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 DEFB136Q30KP8 78 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 C19orf54Q5BKX5 351 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 PDPNQ86YL7 162 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 MRPL41Q8IXM3 137 aaKnown RBP11.66□□□□□ -0.54
KATNA1-201ENST00000335643 LINC00482Q8N8I6 264 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 CLCC1Q96S66 551 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 KLK15Q9H2R5 256 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 SLC35D1Q9NTN3 355 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 METTL1Q9UBP6 276 aaKnown RBP11.66□□□□□ -0.54
KATNA1-201ENST00000335643 ANXA10Q9UJ72 324 aa11.66□□□□□ -0.54
KATNA1-201ENST00000335643 SOX15O60248 233 aa11.65□□□□□ -0.54
KATNA1-201ENST00000335643 RBBP9O75884 186 aa11.65□□□□□ -0.54
KATNA1-201ENST00000335643 ELANEP08246 267 aa11.65□□□□□ -0.54
KATNA1-201ENST00000335643 PITPNAQ00169 270 aa11.65□□□□□ -0.54
KATNA1-201ENST00000335643 KIAA0141Q14154 515 aaPredicted RBP11.65□□□□□ -0.54
KATNA1-201ENST00000335643 DDB2Q92466 427 aa11.65□□□□□ -0.54
KATNA1-201ENST00000335643 RAX2Q96IS3 184 aa11.65□□□□□ -0.54
KATNA1-201ENST00000335643 FAM103A1Q9BTL3 118 aaKnown RBP11.65□□□□□ -0.54
KATNA1-201ENST00000335643 GON7Q9BXV9 100 aa11.65□□□□□ -0.54
KATNA1-201ENST00000335643 AUNIPQ9H7T9 357 aa11.65□□□□□ -0.54
KATNA1-201ENST00000335643 ZFP57Q9NU63 452 aa11.65□□□□□ -0.54
KATNA1-201ENST00000335643 MEIS3P1A6NDR6 274 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 SRRM4A7MD48 611 aaKnown RBP11.64□□□□□ -0.55
KATNA1-201ENST00000335643 NUDT19A8MXV4 375 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 SLC25A17O43808 307 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 IGLV1-40P01703 118 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 APOA2P02652 100 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 DUTP33316 252 aaKnown RBP11.64□□□□□ -0.55
KATNA1-201ENST00000335643 RPS16P62249 146 aaKnown RBP11.64□□□□□ -0.55
KATNA1-201ENST00000335643 PLGLAQ15195 96 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 CNIH2Q6PI25 160 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 ZNF695Q8IW36 515 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 MINDY2Q8NBR6 621 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 BVESQ8NE79 360 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 MYOZ3Q8TDC0 251 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 CASTOR1Q8WTX7 329 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 SNAPC3Q92966 411 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 SLC25A46Q96AG3 418 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 RNF5Q99942 180 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 OR2W1Q9Y3N9 320 aa11.64□□□□□ -0.55
KATNA1-201ENST00000335643 RBM7Q9Y580 266 aaKnown RBP11.64□□□□□ -0.55
KATNA1-201ENST00000335643 A0A0A6YYH2 397 aa11.63□□□□□ -0.55
KATNA1-201ENST00000335643 TRAV41A0A0B4J266 112 aa11.63□□□□□ -0.55
KATNA1-201ENST00000335643 A6NJ64 397 aa11.63□□□□□ -0.55
KATNA1-201ENST00000335643 CA2P00918 260 aa11.63□□□□□ -0.55
KATNA1-201ENST00000335643 HLA-DQB1P01920 261 aa11.63□□□□□ -0.55
KATNA1-201ENST00000335643 CRIP2P52943 208 aaPredicted RBP11.63□□□□□ -0.55
KATNA1-201ENST00000335643 PJVKQ0ZLH3 352 aa11.63□□□□□ -0.55
KATNA1-201ENST00000335643 ECSCRQ19T08 205 aa11.63□□□□□ -0.55
KATNA1-201ENST00000335643 MRGPRG-AS1Q2M3A8 158 aa11.63□□□□□ -0.55
KATNA1-201ENST00000335643 CXorf66Q5JRM2 361 aaPredicted RBP11.63□□□□□ -0.55
KATNA1-201ENST00000335643 CROCCP3Q8IVE0 287 aa11.63□□□□□ -0.55
KATNA1-201ENST00000335643 SAMD12Q8N8I0 201 aa11.63□□□□□ -0.55
KATNA1-201ENST00000335643 BEST4Q8NFU0 473 aa11.63□□□□□ -0.55
KATNA1-201ENST00000335643 FLYWCH2Q96CP2 140 aaKnown RBP11.63□□□□□ -0.55
KATNA1-201ENST00000335643 P2RX4Q99571 388 aa11.63□□□□□ -0.55
KATNA1-201ENST00000335643 A3GALT2U3KPV4 340 aa11.63□□□□□ -0.55
KATNA1-201ENST00000335643 ARPC1BO15143 372 aaKnown RBP11.62□□□□□ -0.55
KATNA1-201ENST00000335643 XRCC3O43542 346 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 TMEM127O75204 238 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 TUSC2O75896 110 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 CRYGBP07316 175 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 CDX1P47902 265 aaPredicted RBP11.62□□□□□ -0.55
KATNA1-201ENST00000335643 RPL30P62888 115 aaKnown RBP11.62□□□□□ -0.55
KATNA1-201ENST00000335643 CTF1Q16619 201 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 UBE2NLQ5JXB2 153 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 FOXB2Q5VYV0 432 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 ZNF660Q6AZW8 331 aaPredicted RBP11.62□□□□□ -0.55
KATNA1-201ENST00000335643 HOGA1Q86XE5 327 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 ZNF645Q8N7E2 425 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 GPHA2Q96T91 129 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 GNB4Q9HAV0 340 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 DIABLOQ9NR28 239 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 SPDEFO95238 335 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 EIF4EP06730 217 aaKnown RBP11.62□□□□□ -0.55
KATNA1-201ENST00000335643 OR5H8P0DN80 308 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 EIF4EBP1Q13541 118 aaPredicted RBP11.62□□□□□ -0.55
KATNA1-201ENST00000335643 TMEM177Q53S58 311 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 HARBI1Q96MB7 349 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 TSNAXQ99598 290 aaKnown RBP11.62□□□□□ -0.55
KATNA1-201ENST00000335643 NUBP2Q9Y5Y2 271 aa11.62□□□□□ -0.55
KATNA1-201ENST00000335643 A0A1W2PN81 502 aa11.61□□□□□ -0.55
KATNA1-201ENST00000335643 GABARAPO95166 117 aa11.61□□□□□ -0.55
KATNA1-201ENST00000335643 CTXN2P0C2S0 81 aa11.61□□□□□ -0.55
KATNA1-201ENST00000335643 CHRNA7P36544 502 aa11.61□□□□□ -0.55
KATNA1-201ENST00000335643 LUMP51884 338 aaPredicted RBP11.61□□□□□ -0.55
KATNA1-201ENST00000335643 TAS2R20P59543 309 aa11.61□□□□□ -0.55
KATNA1-201ENST00000335643 ZNF562Q6V9R5 426 aa11.61□□□□□ -0.55
KATNA1-201ENST00000335643 CCL24O00175 119 aa11.6□□□□□ -0.55
KATNA1-201ENST00000335643 CRYZL1O95825 349 aa11.6□□□□□ -0.55
KATNA1-201ENST00000335643 AADACP22760 399 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms