RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 MINOS1-NBL1R4GNA1 71 aa17.39■□□□□ 0.37
TPM1-204ENST00000334895 ANK3Q12955 4377 aaKnown RBP17.38■□□□□ 0.37
TPM1-204ENST00000334895 TEX13DA0A0J9YY54 714 aaPredicted RBP17.38■□□□□ 0.37
TPM1-204ENST00000334895 IL5P05113 134 aa17.38■□□□□ 0.37
TPM1-204ENST00000334895 F2RP25116 425 aa17.38■□□□□ 0.37
TPM1-204ENST00000334895 ZNF816Q0VGE8 651 aaPredicted RBP17.38■□□□□ 0.37
TPM1-204ENST00000334895 C4orf46Q504U0 113 aa17.38■□□□□ 0.37
TPM1-204ENST00000334895 TGIF2LXQ8IUE1 241 aa17.38■□□□□ 0.37
TPM1-204ENST00000334895 SGPP2Q8IWX5 399 aa17.38■□□□□ 0.37
TPM1-204ENST00000334895 DDB2Q92466 427 aa17.38■□□□□ 0.37
TPM1-204ENST00000334895 RPEQ96AT9 228 aa17.38■□□□□ 0.37
TPM1-204ENST00000334895 NABP2Q9BQ15 211 aa17.38■□□□□ 0.37
TPM1-204ENST00000334895 HILPDAQ9Y5L2 63 aa17.38■□□□□ 0.37
TPM1-204ENST00000334895 SOX21Q9Y651 276 aaPredicted RBP17.38■□□□□ 0.37
TPM1-204ENST00000334895 C9orf170A2RU37 121 aa17.37■□□□□ 0.37
TPM1-204ENST00000334895 DHFRP00374 187 aa17.37■□□□□ 0.37
TPM1-204ENST00000334895 OR5AC1P0C628 307 aa17.37■□□□□ 0.37
TPM1-204ENST00000334895 LGALS4P56470 323 aa17.37■□□□□ 0.37
TPM1-204ENST00000334895 SP6Q3SY56 376 aa17.37■□□□□ 0.37
TPM1-204ENST00000334895 KCTD9Q7L273 389 aa17.37■□□□□ 0.37
TPM1-204ENST00000334895 LYG2Q86SG7 212 aa17.37■□□□□ 0.37
TPM1-204ENST00000334895 TEX29Q8N6K0 151 aa17.37■□□□□ 0.37
TPM1-204ENST00000334895 GALNT14Q96FL9 552 aa17.37■□□□□ 0.37
TPM1-204ENST00000334895 PRR13Q9NZ81 148 aa17.37■□□□□ 0.37
TPM1-204ENST00000334895 C3orf85A0A1B0GTC6 90 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 A0A1W2PPI3 338 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 C7orf66A4D0T2 115 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 PRAF2O60831 178 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 SFT2D2O95562 160 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 HLA-AP01891 365 aaKnown RBP17.36■□□□□ 0.37
TPM1-204ENST00000334895 VAMP1P23763 118 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 S100GP29377 79 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 SLC9A3R2Q15599 337 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 SSX2Q16385 188 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 TCTEX1D2Q8WW35 142 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 ALG5Q9Y673 324 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 A0A0A6YYJ9 748 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 IGHV1-3A0A0C4DH29 117 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 A0A1B0GVG6 124 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 A8MV72 311 aaPredicted RBP17.36■□□□□ 0.37
TPM1-204ENST00000334895 GAPDHP04406 335 aaKnown RBP17.36■□□□□ 0.37
TPM1-204ENST00000334895 EPHA1P21709 976 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 CEACAM3P40198 252 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 THBS3P49746 956 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 OR2B11Q5JQS5 317 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 GLYATL2Q8WU03 294 aa17.36■□□□□ 0.37
TPM1-204ENST00000334895 SONP18583 2426 aaKnown RBP17.35■□□□□ 0.37
TPM1-204ENST00000334895 H0Y980 276 aa17.35■□□□□ 0.37
TPM1-204ENST00000334895 RAMP3O60896 148 aa17.35■□□□□ 0.37
TPM1-204ENST00000334895 CATR1Q13166 79 aa17.35■□□□□ 0.37
TPM1-204ENST00000334895 TMEM187Q14656 261 aa17.35■□□□□ 0.37
TPM1-204ENST00000334895 ZNF585BQ52M93 769 aa17.35■□□□□ 0.37
TPM1-204ENST00000334895 OR5AN1Q8NGI8 311 aa17.35■□□□□ 0.37
TPM1-204ENST00000334895 MALSU1Q96EH3 234 aa17.35■□□□□ 0.37
TPM1-204ENST00000334895 YAE1D1Q9NRH1 226 aa17.35■□□□□ 0.37
TPM1-204ENST00000334895 MTORP42345 2549 aa17.35■□□□□ 0.37
TPM1-204ENST00000334895 A0A0U1RQK1 487 aa17.34■□□□□ 0.37
TPM1-204ENST00000334895 RNF212BA8MTL3 300 aa17.34■□□□□ 0.37
TPM1-204ENST00000334895 H0YJW9 148 aa17.34■□□□□ 0.37
TPM1-204ENST00000334895 IFNA2P01563 188 aa17.34■□□□□ 0.37
TPM1-204ENST00000334895 ANKRD55Q3KP44 614 aa17.34■□□□□ 0.37
TPM1-204ENST00000334895 NANPQ8TBE9 248 aa17.34■□□□□ 0.37
TPM1-204ENST00000334895 ZNF431Q8TF32 576 aaPredicted RBP17.34■□□□□ 0.37
TPM1-204ENST00000334895 CASTOR1Q8WTX7 329 aa17.34■□□□□ 0.37
TPM1-204ENST00000334895 ADTRPQ96IZ2 230 aa17.34■□□□□ 0.37
TPM1-204ENST00000334895 LIN7CQ9NUP9 197 aaKnown RBP17.34■□□□□ 0.37
TPM1-204ENST00000334895 OOSP1A8MZH6 123 aa17.33■□□□□ 0.37
TPM1-204ENST00000334895 TXNL1O43396 289 aa17.33■□□□□ 0.37
TPM1-204ENST00000334895 UCP1P25874 307 aa17.33■□□□□ 0.37
TPM1-204ENST00000334895 FAM120AOSQ5T036 256 aa17.33■□□□□ 0.37
TPM1-204ENST00000334895 LHFPL5Q8TAF8 219 aa17.33■□□□□ 0.37
TPM1-204ENST00000334895 CFHR4Q92496 578 aa17.33■□□□□ 0.37
TPM1-204ENST00000334895 TMEM222Q9H0R3 208 aa17.33■□□□□ 0.37
TPM1-204ENST00000334895 NUP50Q9UKX7 468 aa17.33■□□□□ 0.37
TPM1-204ENST00000334895 HIVEP2P31629 2446 aa17.33■□□□□ 0.36
TPM1-204ENST00000334895 IGHV3-72A0A0B4J1Y9 119 aa17.32■□□□□ 0.36
TPM1-204ENST00000334895 TIMM23O14925 209 aa17.32■□□□□ 0.36
TPM1-204ENST00000334895 DUS4LO95620 317 aaKnown RBP17.32■□□□□ 0.36
TPM1-204ENST00000334895 CBX3Q13185 183 aa17.32■□□□□ 0.36
TPM1-204ENST00000334895 HABP2Q14520 560 aaPredicted RBP17.32■□□□□ 0.36
TPM1-204ENST00000334895 IL17RELQ6ZVW7 336 aa17.32■□□□□ 0.36
TPM1-204ENST00000334895 SPAG16Q8N0X2 631 aa17.32■□□□□ 0.36
TPM1-204ENST00000334895 KCNIP3Q9Y2W7 256 aa17.32■□□□□ 0.36
TPM1-204ENST00000334895 SNRPGP15A8MWD9 76 aa17.32■□□□□ 0.36
TPM1-204ENST00000334895 FCGR3BO75015 233 aa17.32■□□□□ 0.36
TPM1-204ENST00000334895 BPIFB3P59826 476 aa17.32■□□□□ 0.36
TPM1-204ENST00000334895 MOB3BQ86TA1 216 aa17.32■□□□□ 0.36
TPM1-204ENST00000334895 BCL6BQ8N143 479 aaPredicted RBP17.32■□□□□ 0.36
TPM1-204ENST00000334895 OR8H3Q8N146 312 aa17.32■□□□□ 0.36
TPM1-204ENST00000334895 MITD1Q8WV92 249 aa17.32■□□□□ 0.36
TPM1-204ENST00000334895 GPN1Q9HCN4 374 aaPredicted RBP17.32■□□□□ 0.36
TPM1-204ENST00000334895 IGKV1-39P01597 117 aa17.31■□□□□ 0.36
TPM1-204ENST00000334895 IGKV1-16P04430 117 aa17.31■□□□□ 0.36
TPM1-204ENST00000334895 IGKV1D-39P04432 117 aa17.31■□□□□ 0.36
TPM1-204ENST00000334895 LIN54Q6MZP7 749 aa17.31■□□□□ 0.36
TPM1-204ENST00000334895 SLC35D1Q9NTN3 355 aa17.31■□□□□ 0.36
TPM1-204ENST00000334895 PRELID3BQ9Y3B1 194 aa17.31■□□□□ 0.36
TPM1-204ENST00000334895 NSD1Q96L73 2696 aaPredicted RBP17.3■□□□□ 0.36
TPM1-204ENST00000334895 CREBL2O60519 120 aaPredicted RBP17.3■□□□□ 0.36
TPM1-204ENST00000334895 B3GALNT1O75752 331 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms