RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 GPR27Q9NS67 375 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 TCRBV7S3A2A0A539 114 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 NDUFA2O43678 99 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 MYOD1P15172 320 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 C14orf144Q96I85 54 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 NHP2Q9NX24 153 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 TAS2R4Q9NYW5 299 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 GLI3P10071 1580 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 LDB3O75112 727 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 CDK2AP2O75956 126 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 GLRXP35754 106 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 FZD8Q9H461 694 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 LAMB4A4D0S4 1761 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 RGPD4Q7Z3J3 1758 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 SPTA1P02549 2419 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 C9JQL5 133 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 UPK3AO75631 287 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 TUSC2O75896 110 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 DUSP5Q16690 384 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 RNF165Q6ZSG1 346 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 PRICKLE2Q7Z3G6 844 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 SMIM8Q96KF7 97 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 WDR13Q9H1Z4 485 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 DNAJB12Q9NXW2 375 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 GALPQ9UBC7 116 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 TRPM7Q96QT4 1865 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 CRYBG1Q9Y4K1 1723 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 IFNL4K9M1U5 179 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 ITGBL1O95965 494 aaPredicted RBP5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 CD52P31358 61 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 EWSR1Q01844 656 aaKnown RBP eCLIP5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 GJC3Q8NFK1 279 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 FAM174AQ8TBP5 190 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 C20orf144Q9BQM9 153 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 TRAV17A0A0B4J275 112 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 C9orf118A6NHY6 69 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 FBXO45P0C2W1 286 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 ATP6V0E2Q8NHE4 81 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 PCOLCE2Q9UKZ9 415 aa5.3□□□□□ -1.56
CDC42BPA-201ENST00000334218 SFT2D2O95562 160 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 GP9P14770 177 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 TNFRSF1AP19438 455 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 LEPP41159 167 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 RNF183Q96D59 192 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 KLHDC7BQ96G42 594 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 PTPRQQ9UMZ3 2332 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 C7orf66A4D0T2 115 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 FOXE1O00358 373 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 GFRA2O00451 464 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 MFAP2P55001 183 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 NHLRC3Q5JS37 347 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 TNFSF18Q9UNG2 199 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 F5H768 121 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 H3BNC9 293 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 NANOGP1Q8N7R0 232 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 BCORP1Q8N888 145 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 CTHRC1Q96CG8 243 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 CENPVL3A0A0U1RRI6 287 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 RNF222A6NCQ9 220 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 B4DGG1 531 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 RS1O15537 224 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 GALR3O60755 368 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 ZNF865P0CJ78 1059 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 LDLRAD3Q86YD5 345 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 SLC37A2Q8TED4 501 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 C6orf106Q9H6K1 298 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 SELLP14151 372 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 MESP2Q0VG99 397 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 SPANXN5Q5MJ07 72 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 SIGLEC12Q96PQ1 595 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 CLEC1BQ9P126 229 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 RNF114Q9Y508 228 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 TIMM13Q9Y5L4 95 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 HS3ST3B1Q9Y662 390 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 CENPVL1A0A0U1RR11 272 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 F6UB75 175 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 C4BP0C0L5 1744 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 PSMB5P28074 263 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 CGB2Q6NT52 195 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 FAM222BQ8WU58 562 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 SNRNP40Q96DI7 357 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 FGF8P55075 233 aaPredicted RBP5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 HBBP68871 147 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 TMEM255AQ5JRV8 349 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 COLCA1Q6ZS62 124 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 CLEC20AQ6ZU45 233 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 PDLIM5Q96HC4 596 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 FBXL12Q9NXK8 326 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 DLEC1Q9Y238 1755 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 SOCS3O14543 225 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 ETDBQ3ZM63 59 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 PAQR9Q6ZVX9 377 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 OR5C1Q8NGR4 320 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 RFESDQ8TAC1 157 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 TMEM171Q8WVE6 324 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 SCGB3A1Q96QR1 104 aa5.29□□□□□ -1.56
CDC42BPA-201ENST00000334218 CDKN2BP42772 138 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 SSPNQ14714 243 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 PRSS36Q5K4E3 855 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 GNB1LQ9BYB4 327 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms