RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 HARBI1Q96MB7 349 aa9.07□□□□□ -0.96
SPTBN1-201ENST00000333896 CDCA3Q99618 268 aaPredicted RBP9.07□□□□□ -0.96
SPTBN1-201ENST00000333896 CCDC168Q8NDH2 2452 aa9.07□□□□□ -0.96
SPTBN1-201ENST00000333896 A0A0B4J2E0 115 aa9.07□□□□□ -0.96
SPTBN1-201ENST00000333896 A0A1B0GX12 115 aa9.07□□□□□ -0.96
SPTBN1-201ENST00000333896 ID1P41134 155 aa9.07□□□□□ -0.96
SPTBN1-201ENST00000333896 CCSMST1Q4G0I0 132 aa9.07□□□□□ -0.96
SPTBN1-201ENST00000333896 C17orf47Q8NEP4 570 aa9.07□□□□□ -0.96
SPTBN1-201ENST00000333896 OR4X1Q8NH49 305 aa9.07□□□□□ -0.96
SPTBN1-201ENST00000333896 MS4A6AQ9H2W1 248 aa9.07□□□□□ -0.96
SPTBN1-201ENST00000333896 A8MWP6 167 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 PDCD6O75340 191 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 TPTE2P1Q5T6R2 138 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 MOGAT3Q86VF5 341 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 KISS1RQ969F8 398 aaPredicted RBP9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 WDYHV1Q96HA8 205 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 EAF1Q96JC9 268 aaPredicted RBP9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 NEU1Q99519 415 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 LPAR2Q9HBW0 351 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 A0A087WUJ7 227 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 SS18L1O75177 396 aaPredicted RBP9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 KLK2P20151 261 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 COX7A1P24310 79 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 SRIP30626 198 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 GAGE13Q4V321 117 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 ZNF562Q6V9R5 426 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 HOGA1Q86XE5 327 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 RND1Q92730 232 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 C1orf43Q9BWL3 253 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 AICDAQ9GZX7 198 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 ZNF665Q9H7R5 613 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 CGB1A6NKQ9 187 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 FAM90A26D6RGX4 464 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 TMEM50AO95807 157 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 VSIG10L2P0DP72 767 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 RPS4XP62701 263 aaKnown RBP9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 ST6GALNAC3Q8NDV1 305 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 MED29Q9NX70 200 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 WDR38Q5JTN6 314 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 OR2K2Q8NGT1 345 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 ZNF714Q96N38 554 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 B9D1Q9UPM9 204 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 TSPAN2O60636 221 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 MDKP21741 143 aaPredicted RBP9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 RND3P61587 244 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 DCAF12L2Q5VW00 463 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 TEPPQ6URK8 271 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 OR9G4Q8NGQ1 327 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 NRXN3Q9Y4C0 1643 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 KBTBD11-OT1A0A1B0GTJ5 212 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 MRGPRX3Q96LB0 322 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 PHLDA3Q9Y5J5 127 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 IGKV6D-21A0A0A0MT36 114 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 ZNF865P0CJ78 1059 aaPredicted RBP9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 APCDD1LQ8NCL9 501 aa9.06□□□□□ -0.96
SPTBN1-201ENST00000333896 TMEM160Q9NX00 188 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 VPREB1P12018 145 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 C2orf83Q53S99 150 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 OR4C3Q8NH37 302 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 PHLDA1Q8WV24 401 aaPredicted RBP9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 PGLYRP4Q96LB8 373 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 ADAMTSL1Q8N6G6 1762 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 CXCL12P48061 93 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 MRAPQ8TCY5 172 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 APOBEC4Q8WW27 367 aaKnown RBP9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 ASB10Q8WXI3 467 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 A0A1B0GW64 132 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 TMEM189A5PLL7 270 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 IGHV4-39P01824 125 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 RPS20P60866 119 aaKnown RBP9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 TSPO2Q5TGU0 170 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 OR10D3Q8NH80 312 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 ZNF707Q96C28 371 aaPredicted RBP9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 SUMO3P55854 103 aaPredicted RBP9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 ADAD2Q8NCV1 583 aaKnown RBP9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 MMP25Q9NPA2 562 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 H0YL77 283 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 OR5AN1Q8NGI8 311 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 RFESDQ8TAC1 157 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 K7EQS6 105 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 TNFRSF1AP19438 455 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 NXPH1P58417 271 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 PAQR9Q6ZVX9 377 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 HIVEP3Q5T1R4 2406 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 CXorf51AA0A1B0GTR3 108 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 HOXC4P09017 264 aaPredicted RBP9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 SUMO2P61956 95 aaKnown RBP9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 HSD52Q0P140 79 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 INSL4Q14641 139 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 C10orf128Q5T292 105 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 CCL17Q92583 94 aa9.05□□□□□ -0.96
SPTBN1-201ENST00000333896 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.04□□□□□ -0.96
SPTBN1-201ENST00000333896 HBBP68871 147 aa9.04□□□□□ -0.96
SPTBN1-201ENST00000333896 KRTCAP3Q53RY4 240 aa9.04□□□□□ -0.96
SPTBN1-201ENST00000333896 BAHD1Q8TBE0 780 aaPredicted RBP9.04□□□□□ -0.96
SPTBN1-201ENST00000333896 APOBEC3DQ96AK3 386 aaPredicted RBP9.04□□□□□ -0.96
SPTBN1-201ENST00000333896 SPXQ9BT56 116 aa9.04□□□□□ -0.96
SPTBN1-201ENST00000333896 TMUB1Q9BVT8 246 aa9.04□□□□□ -0.96
SPTBN1-201ENST00000333896 RNF122Q9H9V4 155 aa9.04□□□□□ -0.96
SPTBN1-201ENST00000333896 PRR13Q9NZ81 148 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms