RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 DTD1Q8TEA8 209 aa19.86■□□□□ 0.77
TSKU-201ENST00000333090 FKBP11Q9NYL4 201 aa19.86■□□□□ 0.77
TSKU-201ENST00000333090 TRAPPC1Q9Y5R8 145 aa19.86■□□□□ 0.77
TSKU-201ENST00000333090 RPL30P62888 115 aaKnown RBP19.85■□□□□ 0.77
TSKU-201ENST00000333090 FAM53AQ6NSI3 398 aaPredicted RBP19.85■□□□□ 0.77
TSKU-201ENST00000333090 APH1AQ96BI3 265 aa19.85■□□□□ 0.77
TSKU-201ENST00000333090 PMS2P5A8MQ11 134 aa19.85■□□□□ 0.77
TSKU-201ENST00000333090 LINC01551Q86U37 167 aa19.85■□□□□ 0.77
TSKU-201ENST00000333090 THOC3Q96J01 351 aaKnown RBP19.85■□□□□ 0.77
TSKU-201ENST00000333090 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.85■□□□□ 0.77
TSKU-201ENST00000333090 S1PR2O95136 353 aa19.84■□□□□ 0.77
TSKU-201ENST00000333090 CDC34P49427 236 aaPredicted RBP19.84■□□□□ 0.77
TSKU-201ENST00000333090 PPP1CBP62140 327 aa19.84■□□□□ 0.77
TSKU-201ENST00000333090 LCN2P80188 198 aa19.84■□□□□ 0.77
TSKU-201ENST00000333090 CST9LP1Q5W188 147 aa19.84■□□□□ 0.77
TSKU-201ENST00000333090 TMEM256Q8N2U0 113 aa19.84■□□□□ 0.77
TSKU-201ENST00000333090 MRPS18CQ9Y3D5 142 aaKnown RBP19.84■□□□□ 0.77
TSKU-201ENST00000333090 LHX2P50458 406 aa19.84■□□□□ 0.77
TSKU-201ENST00000333090 DERL1Q9BUN8 251 aa19.84■□□□□ 0.77
TSKU-201ENST00000333090 G0S2P27469 103 aa19.83■□□□□ 0.77
TSKU-201ENST00000333090 GTF3C1Q12789 2109 aa19.83■□□□□ 0.77
TSKU-201ENST00000333090 VASH2Q86V25 355 aa19.83■□□□□ 0.77
TSKU-201ENST00000333090 BOKQ9UMX3 212 aaPredicted RBP19.83■□□□□ 0.77
TSKU-201ENST00000333090 CASP6P55212 293 aa19.83■□□□□ 0.76
TSKU-201ENST00000333090 WDR86Q86TI4 376 aa19.83■□□□□ 0.76
TSKU-201ENST00000333090 ZNF645Q8N7E2 425 aa19.83■□□□□ 0.76
TSKU-201ENST00000333090 CDX2Q99626 313 aaPredicted RBP19.83■□□□□ 0.76
TSKU-201ENST00000333090 MBNL3Q9NUK0 354 aaKnown RBP19.83■□□□□ 0.76
TSKU-201ENST00000333090 DOCK10Q96BY6 2186 aa19.83■□□□□ 0.76
TSKU-201ENST00000333090 PGPEP1LA6NFU8 196 aa19.82■□□□□ 0.76
TSKU-201ENST00000333090 NXPH2O95156 264 aa19.82■□□□□ 0.76
TSKU-201ENST00000333090 MT-CO3P00414 261 aa19.82■□□□□ 0.76
TSKU-201ENST00000333090 ATP5G3P48201 142 aa19.82■□□□□ 0.76
TSKU-201ENST00000333090 RPL15P61313 204 aaKnown RBP19.82■□□□□ 0.76
TSKU-201ENST00000333090 NUFIP2Q7Z417 695 aaKnown RBP19.82■□□□□ 0.76
TSKU-201ENST00000333090 SCCPDHQ8NBX0 429 aa19.82■□□□□ 0.76
TSKU-201ENST00000333090 MLNRO43193 412 aa19.82■□□□□ 0.76
TSKU-201ENST00000333090 NDUFB4O95168 129 aa19.82■□□□□ 0.76
TSKU-201ENST00000333090 C1QTNF9P0C862 333 aa19.82■□□□□ 0.76
TSKU-201ENST00000333090 CLDN18P56856 261 aa19.82■□□□□ 0.76
TSKU-201ENST00000333090 ERVFC1-1P60608 527 aa19.82■□□□□ 0.76
TSKU-201ENST00000333090 GNB1P62873 340 aa19.82■□□□□ 0.76
TSKU-201ENST00000333090 GCSAMLQ5JQS6 135 aa19.82■□□□□ 0.76
TSKU-201ENST00000333090 CEBPDP49716 269 aaPredicted RBP19.82■□□□□ 0.76
TSKU-201ENST00000333090 C5orf30Q96GV9 206 aa19.82■□□□□ 0.76
TSKU-201ENST00000333090 POLR3KQ9Y2Y1 108 aaPredicted RBP19.82■□□□□ 0.76
TSKU-201ENST00000333090 TRAV38-1A0A0B4J264 116 aa19.81■□□□□ 0.76
TSKU-201ENST00000333090 CDIPTO14735 213 aa19.81■□□□□ 0.76
TSKU-201ENST00000333090 RAC2P15153 192 aa19.81■□□□□ 0.76
TSKU-201ENST00000333090 GCH1P30793 250 aa19.81■□□□□ 0.76
TSKU-201ENST00000333090 OR3A1P47881 315 aa19.81■□□□□ 0.76
TSKU-201ENST00000333090 BTNL3Q6UXE8 466 aa19.81■□□□□ 0.76
TSKU-201ENST00000333090 RTL8AQ9BWD3 113 aa19.81■□□□□ 0.76
TSKU-201ENST00000333090 FAM166BA8MTA8 275 aa19.81■□□□□ 0.76
TSKU-201ENST00000333090 C17orf98A8MV24 154 aa19.81■□□□□ 0.76
TSKU-201ENST00000333090 NUPR1O60356 82 aa19.81■□□□□ 0.76
TSKU-201ENST00000333090 P0C879 139 aa19.81■□□□□ 0.76
TSKU-201ENST00000333090 ZXDAP98168 799 aa19.81■□□□□ 0.76
TSKU-201ENST00000333090 FIP1L1Q6UN15 594 aaKnown RBP19.81■□□□□ 0.76
TSKU-201ENST00000333090 PRO3102Q9H379 93 aa19.81■□□□□ 0.76
TSKU-201ENST00000333090 WIPI2Q9Y4P8 454 aa19.81■□□□□ 0.76
TSKU-201ENST00000333090 CFAP47Q6ZTR5 3102 aa19.8■□□□□ 0.76
TSKU-201ENST00000333090 C17orf112F2Z3M2 114 aa19.8■□□□□ 0.76
TSKU-201ENST00000333090 MS4A10Q96PG2 267 aa19.8■□□□□ 0.76
TSKU-201ENST00000333090 HES7Q9BYE0 225 aa19.8■□□□□ 0.76
TSKU-201ENST00000333090 KCNIP1Q9NZI2 227 aa19.8■□□□□ 0.76
TSKU-201ENST00000333090 NAGKQ9UJ70 344 aa19.8■□□□□ 0.76
TSKU-201ENST00000333090 M0R143 59 aa19.8■□□□□ 0.76
TSKU-201ENST00000333090 ZNF114Q8NC26 417 aa19.8■□□□□ 0.76
TSKU-201ENST00000333090 OR52L2PQ8NGH6 319 aa19.8■□□□□ 0.76
TSKU-201ENST00000333090 WDYHV1Q96HA8 205 aa19.8■□□□□ 0.76
TSKU-201ENST00000333090 PXMP4Q9Y6I8 212 aa19.8■□□□□ 0.76
TSKU-201ENST00000333090 SH2D1BO14796 132 aa19.79■□□□□ 0.76
TSKU-201ENST00000333090 SELEP16581 610 aa19.79■□□□□ 0.76
TSKU-201ENST00000333090 C1orf194Q5T5A4 169 aa19.79■□□□□ 0.76
TSKU-201ENST00000333090 TCF23Q7RTU1 214 aa19.79■□□□□ 0.76
TSKU-201ENST00000333090 TMEM144Q7Z5S9 345 aa19.79■□□□□ 0.76
TSKU-201ENST00000333090 SGMS2Q8NHU3 365 aa19.79■□□□□ 0.76
TSKU-201ENST00000333090 GALMQ96C23 342 aa19.79■□□□□ 0.76
TSKU-201ENST00000333090 ZNF703Q9H7S9 590 aaPredicted RBP19.79■□□□□ 0.76
TSKU-201ENST00000333090 NTN3O00634 580 aaPredicted RBP19.79■□□□□ 0.76
TSKU-201ENST00000333090 PDE6DO43924 150 aa19.79■□□□□ 0.76
TSKU-201ENST00000333090 IGHEP01854 428 aa19.79■□□□□ 0.76
TSKU-201ENST00000333090 CATR1Q13166 79 aa19.79■□□□□ 0.76
TSKU-201ENST00000333090 C3AR1Q16581 482 aa19.79■□□□□ 0.76
TSKU-201ENST00000333090 H2BFWTQ7Z2G1 175 aa19.79■□□□□ 0.76
TSKU-201ENST00000333090 C12orf49Q9H741 205 aa19.79■□□□□ 0.76
TSKU-201ENST00000333090 POLDIP2Q9Y2S7 368 aa19.79■□□□□ 0.76
TSKU-201ENST00000333090 ZNF705FA8MVS1 300 aaPredicted RBP19.78■□□□□ 0.76
TSKU-201ENST00000333090 ZNF705DP0CH99 300 aaPredicted RBP19.78■□□□□ 0.76
TSKU-201ENST00000333090 ZNF705BP0CI00 300 aaPredicted RBP19.78■□□□□ 0.76
TSKU-201ENST00000333090 BRWD1-AS2P59051 145 aa19.78■□□□□ 0.76
TSKU-201ENST00000333090 ERVK11-1P61568 191 aa19.78■□□□□ 0.76
TSKU-201ENST00000333090 Q8IYB0 196 aa19.78■□□□□ 0.76
TSKU-201ENST00000333090 CIB3Q96Q77 187 aaPredicted RBP19.78■□□□□ 0.76
TSKU-201ENST00000333090 SOX15O60248 233 aa19.78■□□□□ 0.76
TSKU-201ENST00000333090 LINC00205P59089 165 aa19.78■□□□□ 0.76
TSKU-201ENST00000333090 TRA2AQ13595 282 aaKnown RBP eCLIP19.78■□□□□ 0.76
TSKU-201ENST00000333090 OR2M7Q8NG81 312 aa19.78■□□□□ 0.76
TSKU-201ENST00000333090 C12orf77C9JDV5 145 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms