RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ERRFI1Q9UJM3 462 aaPredicted RBP20.58■□□□□ 0.89
SOX1-201ENST00000330949 hCG_38984A0A1B0GV85 526 aa20.58■□□□□ 0.88
SOX1-201ENST00000330949 F2Z2F3 143 aa20.58■□□□□ 0.88
SOX1-201ENST00000330949 TNFSF11O14788 317 aa20.58■□□□□ 0.88
SOX1-201ENST00000330949 IL36BQ9NZH7 164 aa20.58■□□□□ 0.88
SOX1-201ENST00000330949 IGHV1OR21-1A0A087WYE8 117 aa20.57■□□□□ 0.88
SOX1-201ENST00000330949 ATP5G3P48201 142 aa20.57■□□□□ 0.88
SOX1-201ENST00000330949 ZNF501Q96CX3 271 aaPredicted RBP20.57■□□□□ 0.88
SOX1-201ENST00000330949 NPCDR1Q9BY65 106 aa20.57■□□□□ 0.88
SOX1-201ENST00000330949 TRBV9A0A0B4J1U6 114 aa20.57■□□□□ 0.88
SOX1-201ENST00000330949 NPIPA2E9PIF3 369 aa20.57■□□□□ 0.88
SOX1-201ENST00000330949 NPIPA3F8WFD2 350 aa20.57■□□□□ 0.88
SOX1-201ENST00000330949 SH2D1BO14796 132 aa20.57■□□□□ 0.88
SOX1-201ENST00000330949 TSPOP30536 169 aa20.57■□□□□ 0.88
SOX1-201ENST00000330949 AMTP48728 403 aa20.57■□□□□ 0.88
SOX1-201ENST00000330949 HINT1P49773 126 aaPredicted RBP20.57■□□□□ 0.88
SOX1-201ENST00000330949 ZPBPQ9BS86 351 aa20.56■□□□□ 0.88
SOX1-201ENST00000330949 TRAV34A0A0B4J273 112 aa20.56■□□□□ 0.88
SOX1-201ENST00000330949 TNFSF4P23510 183 aa20.56■□□□□ 0.88
SOX1-201ENST00000330949 OR2M3Q8NG83 312 aa20.56■□□□□ 0.88
SOX1-201ENST00000330949 TXNDC17Q9BRA2 123 aa20.56■□□□□ 0.88
SOX1-201ENST00000330949 LIN7CQ9NUP9 197 aaKnown RBP20.56■□□□□ 0.88
SOX1-201ENST00000330949 A0A1W2PR77 199 aa20.55■□□□□ 0.88
SOX1-201ENST00000330949 LMO7DNF2Z398 122 aa20.55■□□□□ 0.88
SOX1-201ENST00000330949 C17orf112F2Z3M2 114 aa20.55■□□□□ 0.88
SOX1-201ENST00000330949 HSPB6O14558 160 aa20.55■□□□□ 0.88
SOX1-201ENST00000330949 BCL3P20749 454 aa20.55■□□□□ 0.88
SOX1-201ENST00000330949 CD27P26842 260 aa20.55■□□□□ 0.88
SOX1-201ENST00000330949 PTGDSP41222 190 aa20.55■□□□□ 0.88
SOX1-201ENST00000330949 TMEM249Q2WGJ8 235 aa20.55■□□□□ 0.88
SOX1-201ENST00000330949 WNT16Q9UBV4 365 aa20.55■□□□□ 0.88
SOX1-201ENST00000330949 CDC42EP3Q9UKI2 254 aa20.55■□□□□ 0.88
SOX1-201ENST00000330949 FGF12P61328 243 aa20.55■□□□□ 0.88
SOX1-201ENST00000330949 HLA-DRB5Q30154 266 aa20.55■□□□□ 0.88
SOX1-201ENST00000330949 SGCZQ96LD1 299 aa20.55■□□□□ 0.88
SOX1-201ENST00000330949 QTRT1Q9BXR0 403 aaKnown RBP20.55■□□□□ 0.88
SOX1-201ENST00000330949 GNB4Q9HAV0 340 aa20.55■□□□□ 0.88
SOX1-201ENST00000330949 OR5B3Q8NH48 314 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 RDH5Q92781 318 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 VPS25Q9BRG1 176 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 TRBV20OR9-2A0A075B6H5 130 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 SAA2-SAA4A0A096LPE2 208 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 SNURFLB1AK76 121 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 PSG4Q00888 419 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 Q6ZVH6 145 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 OR10P1Q8NGE3 313 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 APOBEC3DQ96AK3 386 aaPredicted RBP20.54■□□□□ 0.88
SOX1-201ENST00000330949 KCNS1Q96KK3 526 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 TRAV30A0A087WSZ9 112 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 A0A1B0GX78 115 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 CBY3A6NI87 242 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 VAMP5O95183 116 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 IGLV3-19P01714 112 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 IER3P46695 156 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 TRIM61Q5EBN2 209 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 CCDC74BQ96LY2 380 aa20.54■□□□□ 0.88
SOX1-201ENST00000330949 TNRC18O15417 2968 aaPredicted RBP20.53■□□□□ 0.88
SOX1-201ENST00000330949 DPRXA6NFQ7 191 aa20.53■□□□□ 0.88
SOX1-201ENST00000330949 TFF3Q07654 80 aa20.53■□□□□ 0.88
SOX1-201ENST00000330949 KRTCAP3Q53RY4 240 aa20.53■□□□□ 0.88
SOX1-201ENST00000330949 OR10J3Q5JRS4 329 aa20.53■□□□□ 0.88
SOX1-201ENST00000330949 CORO2AQ92828 525 aa20.53■□□□□ 0.88
SOX1-201ENST00000330949 IGHEP01854 428 aa20.53■□□□□ 0.88
SOX1-201ENST00000330949 SYT13Q7L8C5 426 aa20.53■□□□□ 0.88
SOX1-201ENST00000330949 OR10G3Q8NGC4 313 aa20.53■□□□□ 0.88
SOX1-201ENST00000330949 ZNF837Q96EG3 531 aaPredicted RBP20.53■□□□□ 0.88
SOX1-201ENST00000330949 GNB1LQ9BYB4 327 aa20.53■□□□□ 0.88
SOX1-201ENST00000330949 REG1AP05451 166 aa20.52■□□□□ 0.88
SOX1-201ENST00000330949 PRRX1P54821 245 aa20.52■□□□□ 0.88
SOX1-201ENST00000330949 LGALS4P56470 323 aa20.52■□□□□ 0.88
SOX1-201ENST00000330949 RAB30Q15771 203 aa20.52■□□□□ 0.88
SOX1-201ENST00000330949 ZNF585BQ52M93 769 aa20.52■□□□□ 0.88
SOX1-201ENST00000330949 PNKDQ8N490 385 aa20.52■□□□□ 0.88
SOX1-201ENST00000330949 RAB1CQ92928 201 aa20.52■□□□□ 0.88
SOX1-201ENST00000330949 IGHV1-69-2A0A0G2JMI3 117 aa20.52■□□□□ 0.88
SOX1-201ENST00000330949 ZNF16P17020 682 aaPredicted RBP20.52■□□□□ 0.88
SOX1-201ENST00000330949 NUDT10Q8NFP7 164 aa20.52■□□□□ 0.88
SOX1-201ENST00000330949 CADM4Q8NFZ8 388 aa20.52■□□□□ 0.88
SOX1-201ENST00000330949 IGHV2-26A0A0B4J1V2 119 aa20.51■□□□□ 0.87
SOX1-201ENST00000330949 DEFA4P12838 97 aa20.51■□□□□ 0.87
SOX1-201ENST00000330949 RPL19P84098 196 aaKnown RBP20.51■□□□□ 0.87
SOX1-201ENST00000330949 PLXDC1Q8IUK5 500 aa20.51■□□□□ 0.87
SOX1-201ENST00000330949 NFAM1Q8NET5 270 aaPredicted RBP20.51■□□□□ 0.87
SOX1-201ENST00000330949 OR1L1Q8NH94 360 aa20.51■□□□□ 0.87
SOX1-201ENST00000330949 OCC1Q8TAD7 63 aa20.51■□□□□ 0.87
SOX1-201ENST00000330949 RNF212BA8MTL3 300 aa20.51■□□□□ 0.87
SOX1-201ENST00000330949 DUX1O43812 170 aa20.51■□□□□ 0.87
SOX1-201ENST00000330949 WDR1O75083 606 aa20.51■□□□□ 0.87
SOX1-201ENST00000330949 THBS3P49746 956 aa20.51■□□□□ 0.87
SOX1-201ENST00000330949 SLC24A4Q8NFF2 622 aa20.51■□□□□ 0.87
SOX1-201ENST00000330949 PPP1R3CQ9UQK1 317 aa20.51■□□□□ 0.87
SOX1-201ENST00000330949 MT-ND6P03923 174 aa20.5■□□□□ 0.87
SOX1-201ENST00000330949 PMCHP20382 165 aa20.5■□□□□ 0.87
SOX1-201ENST00000330949 SAXO1Q8IYX7 474 aa20.5■□□□□ 0.87
SOX1-201ENST00000330949 SFXN3Q9BWM7 321 aa20.5■□□□□ 0.87
SOX1-201ENST00000330949 FRYQ5TBA9 3013 aa20.5■□□□□ 0.87
SOX1-201ENST00000330949 TRBV6-6A0A0A6YYG2 114 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 RPS20P60866 119 aaKnown RBP20.49■□□□□ 0.87
SOX1-201ENST00000330949 KRTAP27-1Q3LI81 207 aa20.49■□□□□ 0.87
SOX1-201ENST00000330949 KMT5CQ86Y97 462 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms