RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 EIF4E3Q8N5X7 224 aaKnown RBP13.96□□□□□ -0.18
DDX41-201ENST00000330503 OR1S2Q8NGQ3 325 aa13.96□□□□□ -0.18
DDX41-201ENST00000330503 ZNF251Q9BRH9 671 aa13.96□□□□□ -0.18
DDX41-201ENST00000330503 KAAG1Q9UBP8 84 aa13.96□□□□□ -0.18
DDX41-201ENST00000330503 BORCS7-ASMTA0A0B4J1R7 106 aa13.95□□□□□ -0.18
DDX41-201ENST00000330503 A8MXK9 166 aa13.95□□□□□ -0.18
DDX41-201ENST00000330503 TOR1AO14656 332 aa13.95□□□□□ -0.18
DDX41-201ENST00000330503 CST7O76096 145 aa13.95□□□□□ -0.18
DDX41-201ENST00000330503 HIVEP3Q5T1R4 2406 aa13.95□□□□□ -0.18
DDX41-201ENST00000330503 RAB29O14966 203 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 TXNL1O43396 289 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 NDUFB3O43676 98 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 DYNLT3P51808 116 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 HFEQ30201 348 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 C4orf17Q53FE4 359 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 EIF5AL1Q6IS14 154 aaKnown RBP13.94□□□□□ -0.18
DDX41-201ENST00000330503 CD300LFQ8TDQ1 290 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 DDB2Q92466 427 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 LPAR3Q9UBY5 353 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 YLPM1P49750 1951 aaKnown RBP13.94□□□□□ -0.18
DDX41-201ENST00000330503 SAA2-SAA4A0A096LPE2 208 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 DVL1O14640 695 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 ZG16O60844 167 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 FCGR3BO75015 233 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 ATG12O94817 140 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 SAA2P0DJI9 122 aaPredicted RBP13.94□□□□□ -0.18
DDX41-201ENST00000330503 IAPPP10997 89 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 CCL3L1P16619 93 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 SULT1A2P50226 295 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 CLINT1Q14677 625 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 TMEM30BQ3MIR4 351 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 LRRC10Q5BKY1 277 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 ITLN2Q8WWU7 325 aaPredicted RBP13.94□□□□□ -0.18
DDX41-201ENST00000330503 SMIM8Q96KF7 97 aa13.94□□□□□ -0.18
DDX41-201ENST00000330503 ZNF705EA8MWA4 302 aaPredicted RBP13.93□□□□□ -0.18
DDX41-201ENST00000330503 FAM90A26D6RGX4 464 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 H3BP45 60 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 PPOXP50336 477 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 RPL23AP62750 156 aaKnown RBP13.93□□□□□ -0.18
DDX41-201ENST00000330503 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.93□□□□□ -0.18
DDX41-201ENST00000330503 OR5C1Q8NGR4 320 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.93□□□□□ -0.18
DDX41-201ENST00000330503 HSPB7Q9UBY9 170 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 WSB1Q9Y6I7 421 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 ABCA4P78363 2273 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 SPP1P10451 314 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 GNG10P50151 68 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 MRPS11P82912 194 aaKnown RBP13.93□□□□□ -0.18
DDX41-201ENST00000330503 TNFRSF9Q07011 255 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 BAXQ07812 192 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 SLC25A48Q6ZT89 311 aaKnown RBP13.93□□□□□ -0.18
DDX41-201ENST00000330503 H2BFWTQ7Z2G1 175 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 OR10A7Q8NGE5 316 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 R3HDM4Q96D70 268 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 RBKSQ9H477 322 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 PSENENQ9NZ42 101 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 LAMP3Q9UQV4 416 aa13.93□□□□□ -0.18
DDX41-201ENST00000330503 RBFOX2O43251 390 aaKnown RBP eCLIP13.92□□□□□ -0.186e-7■■■■□ 21.9
DDX41-201ENST00000330503 NDUFA2O43678 99 aa13.92□□□□□ -0.18
DDX41-201ENST00000330503 HPRT1P00492 218 aa13.92□□□□□ -0.18
DDX41-201ENST00000330503 SEC11BP0C7V7 166 aa13.92□□□□□ -0.18
DDX41-201ENST00000330503 UBE2KP61086 200 aa13.92□□□□□ -0.18
DDX41-201ENST00000330503 LYG1Q8N1E2 194 aa13.92□□□□□ -0.18
DDX41-201ENST00000330503 TMEM217Q8N7C4 229 aa13.92□□□□□ -0.18
DDX41-201ENST00000330503 H1FXQ92522 213 aaKnown RBP13.92□□□□□ -0.18
DDX41-201ENST00000330503 FAM122AQ96E09 287 aa13.92□□□□□ -0.18
DDX41-201ENST00000330503 SAT2Q96F10 170 aaPredicted RBP13.92□□□□□ -0.18
DDX41-201ENST00000330503 LINC00052Q96N35 136 aa13.92□□□□□ -0.18
DDX41-201ENST00000330503 ZNF714Q96N38 554 aa13.92□□□□□ -0.18
DDX41-201ENST00000330503 SH3BGRL3Q9H299 93 aa13.92□□□□□ -0.18
DDX41-201ENST00000330503 GAL3ST2Q9H3Q3 398 aa13.92□□□□□ -0.18
DDX41-201ENST00000330503 ZNRD1Q9P1U0 126 aa13.92□□□□□ -0.18
DDX41-201ENST00000330503 MARCH11A6NNE9 402 aa13.91□□□□□ -0.18
DDX41-201ENST00000330503 TMEM267Q0VDI3 215 aaPredicted RBP13.91□□□□□ -0.18
DDX41-201ENST00000330503 C11orf71Q6IPW1 123 aa13.91□□□□□ -0.18
DDX41-201ENST00000330503 HEPN1Q6WQI6 88 aa13.91□□□□□ -0.18
DDX41-201ENST00000330503 HSD17B11Q8NBQ5 300 aa13.91□□□□□ -0.18
DDX41-201ENST00000330503 MARC2Q969Z3 335 aa13.91□□□□□ -0.18
DDX41-201ENST00000330503 RFNGQ9Y644 331 aa13.91□□□□□ -0.18
DDX41-201ENST00000330503 OR9G9P0C7N8 305 aa13.91□□□□□ -0.18
DDX41-201ENST00000330503 SULT1A1P50225 295 aa13.91□□□□□ -0.18
DDX41-201ENST00000330503 DLX6P56179 175 aa13.91□□□□□ -0.18
DDX41-201ENST00000330503 TAS2R30P59541 319 aa13.91□□□□□ -0.18
DDX41-201ENST00000330503 HAPLN4Q86UW8 402 aa13.91□□□□□ -0.18
DDX41-201ENST00000330503 S1PR3Q99500 378 aa13.91□□□□□ -0.18
DDX41-201ENST00000330503 MED6O75586 246 aa13.9□□□□□ -0.18
DDX41-201ENST00000330503 ARL16Q0P5N6 197 aa13.9□□□□□ -0.18
DDX41-201ENST00000330503 ZNF383Q8NA42 475 aa13.9□□□□□ -0.18
DDX41-201ENST00000330503 CBLN4Q9NTU7 201 aa13.9□□□□□ -0.18
DDX41-201ENST00000330503 PRELID3BQ9Y3B1 194 aa13.9□□□□□ -0.18
DDX41-201ENST00000330503 A0A1W2PPR1 153 aa13.9□□□□□ -0.18
DDX41-201ENST00000330503 FSTL3O95633 263 aa13.9□□□□□ -0.18
DDX41-201ENST00000330503 IGHV2-70P01814 119 aa13.9□□□□□ -0.18
DDX41-201ENST00000330503 SOD3P08294 240 aa13.9□□□□□ -0.18
DDX41-201ENST00000330503 DAOP14920 347 aa13.9□□□□□ -0.18
DDX41-201ENST00000330503 KIR2DS2P43631 304 aa13.9□□□□□ -0.18
DDX41-201ENST00000330503 PXDC1Q5TGL8 231 aa13.9□□□□□ -0.18
DDX41-201ENST00000330503 THBS3P49746 956 aa13.89□□□□□ -0.19
DDX41-201ENST00000330503 ZNF266Q14584 549 aa13.89□□□□□ -0.19
DDX41-201ENST00000330503 BTNL8Q6UX41 500 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms