RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 SPCS3P61009 180 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 BPIFA4PQ86YQ2 179 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 ZNRF1Q8ND25 227 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 RTN4RQ9BZR6 473 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 NAT8Q9UHE5 227 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 CHCHD2Q9Y6H1 151 aaPredicted RBP8.74□□□□□ -1.01
CHD3-201ENST00000330494 COL4A6Q14031 1691 aa8.74□□□□□ -1.01
CHD3-201ENST00000330494 P01737 135 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 LEMD1Q68G75 181 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 OR4C12Q96R67 309 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 G6PC2Q9NQR9 355 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 IGHV3-35A0A0C4DH35 117 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 TRBV5-5A0A0J9YX44 114 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 GAGE10A6NGK3 116 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 ATP5J2P56134 94 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 HIST3H3Q16695 136 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 PERPQ96FX8 193 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 CCL19Q99731 98 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 TLNRD1Q9H1K6 362 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 CACNA1EQ15878 2313 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 MGST3O14880 152 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 CD81P60033 236 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 BSXQ3C1V8 233 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 DIRC2Q96SL1 478 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 CEACAM18A8MTB9 384 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 SLC25A17O43808 307 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 CXCL2P19875 107 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 RPL30P62888 115 aaKnown RBP8.73□□□□□ -1.01
CHD3-201ENST00000330494 OR10G8Q8NGN5 311 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 RNF115Q9Y4L5 304 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 HEATR1Q9H583 2144 aaKnown RBP8.73□□□□□ -1.01
CHD3-201ENST00000330494 DIRC3C9JPN6 131 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 SSTR5P35346 364 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 SLC35E4Q6ICL7 350 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 AP5S1Q9NUS5 200 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 PI4KAP42356 2102 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 KLF4O43474 513 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 IGHV3-23P01764 117 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 ZNF837Q96EG3 531 aaPredicted RBP8.73□□□□□ -1.01
CHD3-201ENST00000330494 VAX2Q9UIW0 290 aa8.73□□□□□ -1.01
CHD3-201ENST00000330494 FAM74A7A6NL05 159 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 DLL1O00548 723 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 GAPDHP04406 335 aaKnown RBP8.72□□□□□ -1.01
CHD3-201ENST00000330494 GUCA2BQ16661 112 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 FAM74A3Q4VXF1 159 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 SLC25A38Q96DW6 304 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 ABHD17AQ96GS6 310 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 PPP1R3EQ9H7J1 279 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 POLEQ07864 2286 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 H3BTX0 84 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 MFNGO00587 321 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 C1QL1O75973 258 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 ZNF273Q14593 569 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 GHITMQ9H3K2 345 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 ZDHHC8Q9ULC8 765 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 FNDC1Q4ZHG4 1894 aaPredicted RBP8.72□□□□□ -1.01
CHD3-201ENST00000330494 DHRS7CA6NNS2 312 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 ISG15P05161 165 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 CELA3BP08861 270 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 FREM3P0C091 2139 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 CSRP2Q16527 193 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 KCNMB1Q16558 191 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 ANKRD55Q3KP44 614 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 KHDC3LQ587J8 217 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 TMEM229AB2RXF0 380 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 H3BQ15 152 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 PGLYRP1O75594 196 aaPredicted RBP8.72□□□□□ -1.01
CHD3-201ENST00000330494 HPRT1P00492 218 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 NUBP1P53384 320 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 ROM1Q03395 351 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 SPATA45Q537H7 98 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 S4R3C0 116 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 PPIAL4CA0A0B4J2A2 164 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 PPIAL4GP0DN37 164 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 FSTP19883 344 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 CD1BP29016 333 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 ID4P47928 161 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 PEAR1Q5VY43 1037 aaPredicted RBP8.72□□□□□ -1.01
CHD3-201ENST00000330494 TMEM54Q969K7 222 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 ANAPC16Q96DE5 110 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 CALYQ9NYX4 217 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 HIGD1AQ9Y241 93 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 SF3B6Q9Y3B4 125 aaKnown RBP8.72□□□□□ -1.01
CHD3-201ENST00000330494 PXMP4Q9Y6I8 212 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 MRGPRGQ86SM5 289 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 DOLPP1Q86YN1 238 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 PAXXQ9BUH6 204 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 IDI2-AS1Q9NZ38 188 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 RAXQ9Y2V3 346 aa8.72□□□□□ -1.01
CHD3-201ENST00000330494 ODAMA1E959 279 aa8.71□□□□□ -1.01
CHD3-201ENST00000330494 CXorf1O96002 111 aa8.71□□□□□ -1.01
CHD3-201ENST00000330494 PRSS1P07477 247 aa8.71□□□□□ -1.01
CHD3-201ENST00000330494 MMP9P14780 707 aa8.71□□□□□ -1.01
CHD3-201ENST00000330494 IER3P46695 156 aa8.71□□□□□ -1.01
CHD3-201ENST00000330494 RPL27AP46776 148 aaKnown RBP8.71□□□□□ -1.01
CHD3-201ENST00000330494 C1QL2Q7Z5L3 287 aa8.71□□□□□ -1.01
CHD3-201ENST00000330494 NFAM1Q8NET5 270 aaPredicted RBP8.71□□□□□ -1.01
CHD3-201ENST00000330494 SGK494Q96LW2 274 aa8.71□□□□□ -1.01
CHD3-201ENST00000330494 PTPRDP23468 1912 aa8.71□□□□□ -1.01
CHD3-201ENST00000330494 OR4C46A6NHA9 309 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms