RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 GBGT1Q8N5D6 347 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 ZNF709Q8N972 641 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 ACY3Q96HD9 319 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 PPIAL4AQ9Y536 164 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 IGLV3-12A0A075B6K2 115 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 ATP5G3P48201 142 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 SSR4P51571 173 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 LINC00205P59089 165 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 HOXA4Q00056 320 aaPredicted RBP6.67□□□□□ -1.34
VMA21-201ENST00000330374 ZNF324BQ6AW86 544 aaPredicted RBP6.67□□□□□ -1.34
VMA21-201ENST00000330374 FOXL2NBQ6ZUU3 175 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 OR10D3Q8NH80 312 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 PINX1Q96BK5 328 aaKnown RBP6.67□□□□□ -1.34
VMA21-201ENST00000330374 GPR35Q9HC97 309 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 MANBALQ9NQG1 85 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 GOLT1BQ9Y3E0 138 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 DUXBA0A1W2PPF3 345 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 IRF2P14316 349 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 PAX1P15863 534 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 SELEP16581 610 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 ACOT6Q3I5F7 207 aaPredicted RBP6.67□□□□□ -1.34
VMA21-201ENST00000330374 VN1R17PQ8TDU5 208 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 RNF138Q8WVD3 245 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 TMEM208Q9BTX3 173 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 ICE1Q9Y2F5 2266 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 A0A1W2PQM1 296 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 RAMP3O60896 148 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 HPRT1P00492 218 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 OR3A1P47881 315 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 EDDM3BP56851 147 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 PPP1CBP62140 327 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 ANKRD39Q53RE8 183 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 Q6ZSR3 168 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 FGFRL1Q8N441 504 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 ZNF114Q8NC26 417 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 SGMS2Q8NHU3 365 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 DNASE2BQ8WZ79 361 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 NEIL1Q96FI4 390 aaPredicted RBP6.67□□□□□ -1.34
VMA21-201ENST00000330374 PSMG3Q9BT73 122 aaPredicted RBP6.67□□□□□ -1.34
VMA21-201ENST00000330374 PRRG4Q9BZD6 226 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 PROK2Q9HC23 129 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 TMEM9BQ9NQ34 198 aa6.67□□□□□ -1.34
VMA21-201ENST00000330374 NPPCP23582 126 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 HOXA6P31267 233 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 CEACAM6P40199 344 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 FBXO46Q6PJ61 603 aaPredicted RBP6.66□□□□□ -1.34
VMA21-201ENST00000330374 RPS19BP1Q86WX3 136 aaKnown RBP6.66□□□□□ -1.34
VMA21-201ENST00000330374 ZDHHC11Q9H8X9 412 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 TRAV24A0A0B4J272 114 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 DEGS1O15121 323 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 CTXN2P0C2S0 81 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 CBLN1P23435 193 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 RAC3P60763 192 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 PCOLCEQ15113 449 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 TGIF2LYQ8IUE0 185 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 CTXND1A0A1B0GTU2 59 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 ZG16O60844 167 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 SERPINA7P05543 415 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 CA6P23280 308 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 CCKARP32238 428 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 CEBPDP49716 269 aaPredicted RBP6.66□□□□□ -1.34
VMA21-201ENST00000330374 PCBD1P61457 104 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 ZNF585BQ52M93 769 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 WDR74Q6RFH5 385 aaPredicted RBP6.66□□□□□ -1.34
VMA21-201ENST00000330374 CMTM2Q8TAZ6 248 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 DIRC2Q96SL1 478 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 PYGO2Q9BRQ0 406 aa6.66□□□□□ -1.34
VMA21-201ENST00000330374 IGHV5-10-1A0A0J9YXX1 117 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 A0A1B0GWJ7 208 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 C10orf142B7Z368 130 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 GRNP28799 593 aaKnown RBP6.65□□□□□ -1.34
VMA21-201ENST00000330374 ADMP35318 185 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 OR5I1Q13606 314 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 LTC4SQ16873 150 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 OR1L1Q8NH94 360 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 HSPB9Q9BQS6 159 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 DLL3Q9NYJ7 618 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 DSPP15924 2871 aaKnown RBP6.65□□□□□ -1.34
VMA21-201ENST00000330374 MRPL33O75394 65 aaKnown RBP6.65□□□□□ -1.34
VMA21-201ENST00000330374 TFF1P04155 84 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 FKBP2P26885 142 aaKnown RBP6.65□□□□□ -1.34
VMA21-201ENST00000330374 CDKN1AP38936 164 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 C1orf194Q5T5A4 169 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 KMT5CQ86Y97 462 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 FAM58AQ8N1B3 248 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 HARBI1Q96MB7 349 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 SAMD10Q9BYL1 202 aa6.65□□□□□ -1.34
VMA21-201ENST00000330374 ZNF716A6NP11 495 aa6.65□□□□□ -1.35
VMA21-201ENST00000330374 CBR3O75828 277 aa6.65□□□□□ -1.35
VMA21-201ENST00000330374 COX5AP20674 150 aa6.65□□□□□ -1.35
VMA21-201ENST00000330374 GDF1P27539 372 aa6.65□□□□□ -1.35
VMA21-201ENST00000330374 OR10J1P30954 320 aa6.65□□□□□ -1.35
VMA21-201ENST00000330374 COA6Q5JTJ3 125 aaKnown RBP6.65□□□□□ -1.35
VMA21-201ENST00000330374 ZNF503-AS2A6NEH8 195 aa6.65□□□□□ -1.35
VMA21-201ENST00000330374 SLC17A3O00476 420 aa6.65□□□□□ -1.35
VMA21-201ENST00000330374 P04436 131 aa6.65□□□□□ -1.35
VMA21-201ENST00000330374 VPREB1P12018 145 aa6.65□□□□□ -1.35
VMA21-201ENST00000330374 TNFSF10P50591 281 aa6.65□□□□□ -1.35
VMA21-201ENST00000330374 BAGE3Q86Y29 109 aa6.65□□□□□ -1.35
VMA21-201ENST00000330374 BAGE2Q86Y30 109 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms