RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 MALSU1Q96EH3 234 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 MEGF10Q96KG7 1140 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 AQP10Q96PS8 301 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 FBLN5Q9UBX5 448 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 SPTBN5Q9NRC6 3674 aaKnown RBP13.51□□□□□ -0.25
SYNM-201ENST00000328642 WNK1Q9H4A3 2382 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 MFSD2BA6NFX1 497 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 CLRN3Q8NCR9 226 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 NRIP2Q9BQI9 281 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 SH2D2AQ9NP31 389 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 SIRT7Q9NRC8 400 aa13.51□□□□□ -0.25
SYNM-201ENST00000328642 C7orf77A4D0Y5 90 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 ZNF737O75373 536 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 PLAUP00749 431 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 HRASP01112 189 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 PRB4P10163 310 aaPredicted RBP13.5□□□□□ -0.25
SYNM-201ENST00000328642 MMP9P14780 707 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 WDR82Q6UXN9 313 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 RBKSQ9H477 322 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 LY6HO94772 140 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 ACOT6Q3I5F7 207 aaPredicted RBP13.5□□□□□ -0.25
SYNM-201ENST00000328642 CYB561D1Q8N8Q1 229 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 MARCH11A6NNE9 402 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 CA11O75493 328 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 IL3RAP26951 378 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 GLRXP35754 106 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 RAB5CP51148 216 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 HTD2P86397 168 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 TNXAQ16473 311 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 TIMM23BQ5SRD1 257 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 ZNF880Q6PDB4 577 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 DHRS11Q6UWP2 260 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 OR4S2Q8NH73 311 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 ZNF251Q9BRH9 671 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 ASCL3Q9NQ33 180 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 TNFRSF19Q9NS68 423 aa13.5□□□□□ -0.25
SYNM-201ENST00000328642 A0A1B0GU03 582 aa13.49□□□□□ -0.25
SYNM-201ENST00000328642 REG1AP05451 166 aa13.49□□□□□ -0.25
SYNM-201ENST00000328642 ORM2P19652 201 aa13.49□□□□□ -0.25
SYNM-201ENST00000328642 PEAR1Q5VY43 1037 aaPredicted RBP13.49□□□□□ -0.25
SYNM-201ENST00000328642 HCP5Q6MZN7 132 aa13.49□□□□□ -0.25
SYNM-201ENST00000328642 SAT2Q96F10 170 aaPredicted RBP13.49□□□□□ -0.25
SYNM-201ENST00000328642 ZDHHC11Q9H8X9 412 aa13.49□□□□□ -0.25
SYNM-201ENST00000328642 DCAF16Q9NXF7 216 aa13.49□□□□□ -0.25
SYNM-201ENST00000328642 RAB19A4D1S5 217 aa13.49□□□□□ -0.25
SYNM-201ENST00000328642 SS18L1O75177 396 aaPredicted RBP13.49□□□□□ -0.25
SYNM-201ENST00000328642 LHFPL1Q86WI0 220 aa13.49□□□□□ -0.25
SYNM-201ENST00000328642 NUDT16L1Q9BRJ7 211 aaKnown RBP13.49□□□□□ -0.25
SYNM-201ENST00000328642 MS4A5Q9H3V2 200 aa13.49□□□□□ -0.25
SYNM-201ENST00000328642 PGA5P0DJD9 388 aa13.49□□□□□ -0.25
SYNM-201ENST00000328642 SNRPEP62304 92 aaKnown RBP13.49□□□□□ -0.25
SYNM-201ENST00000328642 HIST1H3AP68431 136 aa13.49□□□□□ -0.25
SYNM-201ENST00000328642 USF2Q15853 346 aaPredicted RBP13.49□□□□□ -0.25
SYNM-201ENST00000328642 PAGE4O60829 102 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 UHRF2Q96PU4 802 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 MDFIC2A0A1B0GVS7 189 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 MT-ND4LP03901 98 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 SULT1A2P50226 295 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 ARF6P62330 175 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 TGIF2LYQ8IUE0 185 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 TGIF2LXQ8IUE1 241 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 BLNKQ8WV28 456 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 GAL3ST2Q9H3Q3 398 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 TMPRSS5Q9H3S3 457 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 GNB4Q9HAV0 340 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 MLNRO43193 412 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 FAM78BQ5VT40 261 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 ZNF474Q6S9Z5 364 aaPredicted RBP13.48□□□□□ -0.25
SYNM-201ENST00000328642 SAXO1Q8IYX7 474 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 PCGF1Q9BSM1 259 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 ATPIF1Q9UII2 106 aa13.48□□□□□ -0.25
SYNM-201ENST00000328642 J3QR06 171 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 ADH4P08319 380 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 CSRP1P21291 193 aaKnown RBP13.47□□□□□ -0.25
SYNM-201ENST00000328642 CDC34P49427 236 aaPredicted RBP13.47□□□□□ -0.25
SYNM-201ENST00000328642 LRRK2Q5S007 2527 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 FAM90A10PA6NDY2 464 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 FAM90A18PA6NE21 464 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 FAM90A16PA6NEW6 464 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 FAM90A20PA6NIJ5 464 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 FAM90A8PA6NJQ4 464 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 FAM90A7PA6NKC0 464 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 FAM90A22PA8MWA6 464 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 FAM90A12PA8MX19 464 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 FAM90A5PA8MXJ8 464 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 FAM90A23PA8MXZ1 464 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 RBP4P02753 201 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 FAM90A15PP0C7V4 464 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 FAM90A13PP0C7W8 464 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 FAM90A14PP0C7W9 464 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 FAM90A24PP0C7X0 464 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 CHRNB4P30926 498 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 CD200P41217 278 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 SSX2Q16385 188 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 OR10A7Q8NGE5 316 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 HMGN3Q15651 99 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 TMEM37Q8WXS4 190 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 NEUROG1Q92886 237 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 SNX22Q96L94 193 aa13.47□□□□□ -0.25
SYNM-201ENST00000328642 CACFD1Q9UGQ2 172 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms