RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 OR13A1Q8NGR1 328 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 COQ2Q96H96 371 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 GPR61Q9BZJ8 451 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 SIRT7Q9NRC8 400 aa11.78□□□□□ -0.52
ATP2C1-201ENST00000328560 GCH1P30793 250 aa11.77□□□□□ -0.52
ATP2C1-201ENST00000328560 DEFB109BQ30KR1 87 aa11.77□□□□□ -0.52
ATP2C1-201ENST00000328560 FFAR4Q5NUL3 377 aa11.77□□□□□ -0.52
ATP2C1-201ENST00000328560 WDR25Q64LD2 544 aaPredicted RBP11.77□□□□□ -0.52
ATP2C1-201ENST00000328560 C1QL4Q86Z23 238 aa11.77□□□□□ -0.52
ATP2C1-201ENST00000328560 DTD1Q8TEA8 209 aa11.77□□□□□ -0.52
ATP2C1-201ENST00000328560 MBD3L1Q8WWY6 194 aa11.77□□□□□ -0.52
ATP2C1-201ENST00000328560 PINX1Q96BK5 328 aaKnown RBP11.77□□□□□ -0.52
ATP2C1-201ENST00000328560 GAR1Q9NY12 217 aaKnown RBP11.77□□□□□ -0.52
ATP2C1-201ENST00000328560 SMCO3A2RU48 225 aa11.77□□□□□ -0.53
ATP2C1-201ENST00000328560 OOEPA6NGQ2 149 aa11.77□□□□□ -0.53
ATP2C1-201ENST00000328560 LRRC30A6NM36 301 aa11.77□□□□□ -0.53
ATP2C1-201ENST00000328560 OR10G4Q8NGN3 311 aa11.77□□□□□ -0.53
ATP2C1-201ENST00000328560 OR10G9Q8NGN4 311 aa11.77□□□□□ -0.53
ATP2C1-201ENST00000328560 OR10G7Q8NGN6 311 aa11.77□□□□□ -0.53
ATP2C1-201ENST00000328560 OR4F5Q8NH21 305 aa11.77□□□□□ -0.53
ATP2C1-201ENST00000328560 OR4F4Q96R69 305 aa11.77□□□□□ -0.53
ATP2C1-201ENST00000328560 ZDHHC11Q9H8X9 412 aa11.77□□□□□ -0.53
ATP2C1-201ENST00000328560 PPIHO43447 177 aaKnown RBP11.77□□□□□ -0.53
ATP2C1-201ENST00000328560 KMT2EQ8IZD2 1858 aa11.77□□□□□ -0.53
ATP2C1-201ENST00000328560 PPP1R2P9O14990 202 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 TRGC1P0CF51 173 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 CDX1P47902 265 aaPredicted RBP11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 FOXF2Q12947 444 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 INO80CQ6PI98 192 aaPredicted RBP11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 LURAP1LQ8IV03 231 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 FRZBQ92765 325 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 SDF2L1Q9HCN8 221 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 GNG12Q9UBI6 72 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 ROS1P08922 2347 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 IFITM10A6NMD0 228 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 S100PP25815 95 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 MAS1LP35410 378 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 NCR3LG1Q68D85 454 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 CDPF1Q6NVV7 123 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 TMEM14EPQ6UXP3 125 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 ACP7Q6ZNF0 438 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 Q6ZT83 130 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 OR51M1Q9H341 326 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 GAB2Q9UQC2 676 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 RIF1Q5UIP0 2472 aaKnown RBP11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 PTPRZ1P23471 2315 aaPredicted RBP11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 CYB5R3P00387 301 aaPredicted RBP11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 WDR82Q6UXN9 313 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 C11orf53Q8IXP5 236 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 C9orf106Q8NAJ2 232 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 OR2Z1Q8NG97 314 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 LRRC29Q8WV35 223 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 CXXC4Q9H2H0 198 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 HSPB7Q9UBY9 170 aa11.76□□□□□ -0.53
ATP2C1-201ENST00000328560 INTS1Q8N201 2190 aaKnown RBP11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 CXorf65A6NEN9 183 aa11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 LINC00473A8K010 186 aa11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 CECR9P0C854 216 aa11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 PSMB3P49720 205 aa11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 MEF2BQ02080 365 aaPredicted RBP11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 VHLLQ6RSH7 139 aa11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 SDSLQ96GA7 329 aa11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 SNX22Q96L94 193 aa11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 TMEM147Q9BVK8 224 aa11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 AURKAIP1Q9NWT8 199 aaPredicted RBP11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 TMEM210A6NLX4 147 aa11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 J3QW42 95 aa11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 PNRC1Q12796 327 aaPredicted RBP11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 RTP5Q14D33 572 aa11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 PYY3Q5JQD4 70 aa11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 C9orf152Q5JTZ5 239 aa11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 VKORC1L1Q8N0U8 176 aa11.75□□□□□ -0.53
ATP2C1-201ENST00000328560 IGHV3OR15-7A0A075B7D8 119 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 B4DEV8 164 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 FCGR3BO75015 233 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 SOD3P08294 240 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 FABP4P15090 132 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 BRWD1-AS2P59051 145 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 CD81P60033 236 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 SLC35E4Q6ICL7 350 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 ABHD5Q8WTS1 349 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 PAGE4O60829 102 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 EGR1P18146 543 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 EDDM3BP56851 147 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 UBE2G2P60604 165 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 TMEM241Q24JQ0 296 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 OPN3Q9H1Y3 402 aaPredicted RBP11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 BOD1L1Q8NFC6 3051 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 FAM90A26D6RGX4 464 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 HOXB1P14653 301 aaPredicted RBP11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 KIR2DL2P43627 348 aaPredicted RBP11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 ZNF718Q3SXZ3 478 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 C16orf82Q7Z2V1 217 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 RAB24Q969Q5 203 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 CLCF1Q9UBD9 225 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 LAMP3Q9UQV4 416 aa11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 COL27A1Q8IZC6 1860 aaPredicted RBP11.74□□□□□ -0.53
ATP2C1-201ENST00000328560 SPINT2O43291 252 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 SMIM21Q3B7S5 101 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 GCSAMLQ5JQS6 135 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms