RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 C11orf72Q8NBR9 251 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 NUP35Q8NFH5 326 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 NELFBQ8WX92 580 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 ISOC1Q96CN7 298 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 MARVELD1Q9BSK0 173 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 TMEM243Q9BU79 118 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 GGTLC1Q9BX51 225 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 MAP1LC3CQ9BXW4 147 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 ZSCAN16Q9H4T2 348 aaPredicted RBP0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 DHX35Q9H5Z1 703 aaKnown RBP0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 TMEM38AQ9H6F2 299 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 ZNF442Q9H7R0 627 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 GEMIN7Q9H840 131 aaKnown RBP0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 ABCB9Q9NP78 766 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 OR2S2Q9NQN1 319 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 ASF1BQ9NVP2 202 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 DMAC2Q9NW81 257 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 CMTM6Q9NX76 183 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 TAS2R7Q9NYW3 318 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 MYEF2Q9P2K5 600 aaKnown RBP0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 FBXL3Q9UKT7 428 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 ENPP4Q9Y6X5 453 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 ERICH4A6NGS2 130 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 GOLGA8KD6RF30 607 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 ANKRD65E5RJM6 399 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 RFXANKO14593 260 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 CRTAPO75718 401 aaPredicted RBP0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 CDK14O94921 469 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 CXorf1O96002 111 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 UBCP0CG48 685 aaKnown RBP0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 MT1HL1P0DM35 61 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 SCGB1A1P11684 91 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 NQO2P16083 231 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 HIST1H1CP16403 213 aaKnown RBP0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 ALDH3A1P30838 453 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 OR1E1P30953 314 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 UGT2B10P36537 528 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 SLC1A2P43004 574 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 CRATP43155 626 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 RANBP1P43487 201 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 DNASE1L1P49184 302 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 FABP6P51161 128 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 RWDD2BP57060 319 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 TAS2R43P59537 309 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 CCL7P80098 99 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 SLC25A11Q02978 314 aaKnown RBP0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 FADDQ13158 208 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 ALX1Q15699 326 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 HIST2H3PS2Q5TEC6 136 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 FAM173BQ6P4H8 233 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 ZNF773Q6PK81 442 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 Q6ZRN7 208 aaPredicted RBP0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 TMEM136Q6ZRR5 245 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 SSX6Q7RTT6 188 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 BBS7Q8IWZ6 715 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 BOD1L2Q8IYS8 172 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 CA13Q8N1Q1 262 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 ZNF738Q8NE65 137 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 OR1L1Q8NH94 360 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 ZNF420Q8TAQ5 688 aaPredicted RBP0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 LRRC39Q96DD0 335 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 WDR34Q96EX3 536 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 TSNAXQ99598 290 aaKnown RBP0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 ANAPC13Q9BS18 74 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 NUDT9Q9BW91 350 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 MRPL20Q9BYC9 149 aaKnown RBP0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 TMEM133Q9H2Q1 129 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 CYP3A43Q9HB55 503 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 VAPAQ9P0L0 249 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 CES1P1Q9UKY3 287 aa0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 PUS1Q9Y606 427 aaKnown RBP eCLIP0.61□□□□□ -2.31
CCDC144A-201ENST00000328495 TMEM189A5PLL7 270 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 CEACAM18A8MTB9 384 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 H3BN98 237 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 M0R1X1 148 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 FOXE1O00358 373 aaPredicted RBP0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 SLC9A3R1O14745 358 aaPredicted RBP0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 MRPS14O60783 128 aaKnown RBP0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 PSIP1O75475 530 aaKnown RBP0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 NCR2O95944 276 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 IGHV3-7P01780 117 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 TCP1P17987 556 aaKnown RBP0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 ATF1P18846 271 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 RAB4AP20338 218 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 GSTM3P21266 225 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 PRTN3P24158 256 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 RPA3P35244 121 aaPredicted RBP0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 RGS6P49758 472 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 OR12D2P58182 307 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 SLC9A3R2Q15599 337 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 TRIP13Q15645 432 aaPredicted RBP0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 ATP6V1FQ16864 119 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 ZCWPW2Q504Y3 356 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 KDM4DQ6B0I6 523 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 MORN3Q6PF18 240 aaPredicted RBP0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 DEGS2Q6QHC5 323 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 LYZL2Q7Z4W2 148 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 ZNF101Q8IZC7 436 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 TRIML2Q8N7C3 387 aa0.6□□□□□ -2.31
CCDC144A-201ENST00000328495 OR7G1Q8NGA0 311 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms