RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 RND3P61587 244 aa9.35□□□□□ -0.91
SNRNP200-201ENST00000323853 CALHM1Q8IU99 346 aa9.35□□□□□ -0.91
SNRNP200-201ENST00000323853 PDCD11Q14690 1871 aaKnown RBP9.35□□□□□ -0.91
SNRNP200-201ENST00000323853 RPL8P62917 257 aaKnown RBP9.35□□□□□ -0.91
SNRNP200-201ENST00000323853 UNC119Q13432 240 aa9.35□□□□□ -0.91
SNRNP200-201ENST00000323853 OR4C12Q96R67 309 aa9.35□□□□□ -0.91
SNRNP200-201ENST00000323853 ATG101Q9BSB4 218 aa9.35□□□□□ -0.91
SNRNP200-201ENST00000323853 LINC00470Q9BZP3 86 aa9.35□□□□□ -0.91
SNRNP200-201ENST00000323853 ZNF552Q9H707 407 aaPredicted RBP9.35□□□□□ -0.91
SNRNP200-201ENST00000323853 ZNF430Q9H8G1 570 aaPredicted RBP9.35□□□□□ -0.91
SNRNP200-201ENST00000323853 H0YL77 283 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 TGFBR3LH3BV60 316 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 LINC00869P0C866 280 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 ZNF735P0CB33 412 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 ARL14EPLP0DKL9 152 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 CTSSP25774 331 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 HOXA4Q00056 320 aaPredicted RBP9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 TM2D1Q9BX74 207 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 IFITM10A6NMD0 228 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 TP53RKQ96S44 253 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 ZFP30Q9Y2G7 519 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 ODAMA1E959 279 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 RECKO95980 971 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 SUCLG1P53597 346 aaKnown RBP9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 SPSB2Q99619 263 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 CHCHD2Q9Y6H1 151 aaPredicted RBP9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 GCGP01275 180 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 TLNRD1Q9H1K6 362 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 MT-ND6P03923 174 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 SP9P0CG40 484 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 GPR6P46095 362 aaPredicted RBP9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 PSMB2P49721 201 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 SCNM1Q9BWG6 230 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 QTRT1Q9BXR0 403 aaKnown RBP9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 FOXJ2Q9P0K8 574 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 HILPDAQ9Y5L2 63 aa9.34□□□□□ -0.91
SNRNP200-201ENST00000323853 IGHV3-72A0A0B4J1Y9 119 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 SYNGR3O43761 229 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 CDC42EP3Q9UKI2 254 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 MARCH11A6NNE9 402 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 MRPL18Q9H0U6 180 aaKnown RBP9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 IGKV3D-11A0A0A0MRZ8 115 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 CXorf65A6NEN9 183 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 MARVELD3Q96A59 401 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 ZNF25P17030 456 aaPredicted RBP9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 SPATA45Q537H7 98 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 SCGB1D4Q6XE38 83 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 PQLC2Q6ZP29 291 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 COLQQ9Y215 455 aaPredicted RBP9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 LTBP1Q14766 1721 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 RNF224P0DH78 156 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 ZNF708P17019 499 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 IGKV1D-43A0A0B4J1Z2 117 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 HCP5Q6MZN7 132 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 WFDC3Q8IUB2 231 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 HSPB9Q9BQS6 159 aa9.33□□□□□ -0.92
SNRNP200-201ENST00000323853 NPIPB9F8W1W9 429 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 PTGDSP41222 190 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 MFAP2P55001 183 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 SELENOTP62341 195 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 SLC35B1P78383 322 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 ZNF146Q15072 292 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 SPANXN1Q5VSR9 72 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 ELOVL1Q9BW60 279 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 OR4C46A6NHA9 309 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 FAM106CPP0CH98 169 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 LRRC75BQ2VPJ9 315 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 C5orf52A6NGY3 159 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 A8MWL6 223 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 KIR2DL2P43627 348 aaPredicted RBP9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 HSPE1P61604 102 aaKnown RBP9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 APCDD1LQ8NCL9 501 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 RBM14Q96PK6 669 aaKnown RBP9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 NEUROG3Q9Y4Z2 214 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 IGKV3-7A0A075B6H7 116 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 GLIPR1P48060 266 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 PSG9Q00887 426 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 ATP1A1-AS1Q5TC04 95 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 MMD2Q8IY49 270 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 DRAM1Q8N682 238 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 LEAP2Q969E1 77 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 RABAC1Q9UI14 185 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 ZNF841Q6ZN19 808 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 PPP1R32Q7Z5V6 425 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 SHISA5Q8N114 240 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 SFTPCP11686 197 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 AREGP15514 252 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 NUBP1P53384 320 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 UCNP55089 124 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 LOXL3P58215 753 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 TMEM30BQ3MIR4 351 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 FADS6Q8N9I5 356 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 OR4A5Q8NH83 315 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 LPAR2Q9HBW0 351 aa9.32□□□□□ -0.92
SNRNP200-201ENST00000323853 TRPM6Q9BX84 2022 aa9.31□□□□□ -0.92
SNRNP200-201ENST00000323853 ZNF729A6NN14 1252 aaPredicted RBP9.31□□□□□ -0.92
SNRNP200-201ENST00000323853 CD40P25942 277 aa9.31□□□□□ -0.92
SNRNP200-201ENST00000323853 WDR25Q64LD2 544 aaPredicted RBP9.31□□□□□ -0.92
SNRNP200-201ENST00000323853 RTBDNQ9BSG5 229 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms