RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 RAB25P57735 213 aa11□□□□□ -0.65
PRPF18-201ENST00000320054 RPL30P62888 115 aaKnown RBP11□□□□□ -0.65
PRPF18-201ENST00000320054 PPP1R1AQ13522 171 aa11□□□□□ -0.65
PRPF18-201ENST00000320054 DIAPH2-AS1Q14236 149 aa11□□□□□ -0.65
PRPF18-201ENST00000320054 CCDC144NLQ6NUI1 221 aa11□□□□□ -0.65
PRPF18-201ENST00000320054 GLDNQ6ZMI3 551 aaPredicted RBP11□□□□□ -0.65
PRPF18-201ENST00000320054 Q6ZNX1 250 aa11□□□□□ -0.65
PRPF18-201ENST00000320054 LHFPL4Q7Z7J7 247 aa11□□□□□ -0.65
PRPF18-201ENST00000320054 LYG2Q86SG7 212 aa11□□□□□ -0.65
PRPF18-201ENST00000320054 OR5AN1Q8NGI8 311 aa11□□□□□ -0.65
PRPF18-201ENST00000320054 CAPSLQ8WWF8 208 aa11□□□□□ -0.65
PRPF18-201ENST00000320054 DDB2Q92466 427 aa11□□□□□ -0.65
PRPF18-201ENST00000320054 GPHA2Q96T91 129 aa11□□□□□ -0.65
PRPF18-201ENST00000320054 MRPL20Q9BYC9 149 aaKnown RBP11□□□□□ -0.65
PRPF18-201ENST00000320054 YAE1D1Q9NRH1 226 aa11□□□□□ -0.65
PRPF18-201ENST00000320054 TMEM160Q9NX00 188 aa11□□□□□ -0.65
PRPF18-201ENST00000320054 PRELID3BQ9Y3B1 194 aa11□□□□□ -0.65
PRPF18-201ENST00000320054 NAV3Q8IVL0 2385 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 IGHV1-3A0A0C4DH29 117 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 A0A1W2PPI3 338 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 C9orf170A2RU37 121 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 C7orf66A4D0T2 115 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 A8MV72 311 aaPredicted RBP10.99□□□□□ -0.65
PRPF18-201ENST00000320054 SNRPGP15A8MWD9 76 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 RBFOX2O43251 390 aaKnown RBP eCLIP10.99□□□□□ -0.65
PRPF18-201ENST00000320054 ANXA3P12429 323 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 MC5RP33032 325 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 KIR2DS2P43631 304 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 DHRS2Q13268 280 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 HABP2Q14520 560 aaPredicted RBP10.99□□□□□ -0.65
PRPF18-201ENST00000320054 C4orf46Q504U0 113 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 RUSC1-AS1Q66K80 236 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 BRD3OSQ6XYD6 125 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 C9orf139Q6ZV77 190 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 ZNF383Q8NA42 475 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 DRAXINQ8NBI3 349 aaPredicted RBP10.99□□□□□ -0.65
PRPF18-201ENST00000320054 OR51H1Q8NH63 302 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 CD300LFQ8TDQ1 290 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 TCTEX1D2Q8WW35 142 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 BEX2Q9BXY8 128 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 BEX1Q9HBH7 125 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 GPN1Q9HCN4 374 aaPredicted RBP10.99□□□□□ -0.65
PRPF18-201ENST00000320054 MXRA5Q9NR99 2828 aa10.99□□□□□ -0.65
PRPF18-201ENST00000320054 IGHV3OR16-10A0A075B7F0 116 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 A0A0B4J293 547 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 DUS4LO95620 317 aaKnown RBP10.98□□□□□ -0.65
PRPF18-201ENST00000320054 IFNA2P01563 188 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 HLA-AP01891 365 aaKnown RBP10.98□□□□□ -0.65
PRPF18-201ENST00000320054 APOA2P02652 100 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 RRASP10301 218 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 VAMP1P23763 118 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 UCP1P25874 307 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 REG1BP48304 166 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 ARHGDIBP52566 201 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 SSX2Q16385 188 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 TATDN3Q17R31 274 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 FAM120AOSQ5T036 256 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 DHRS7BQ6IAN0 325 aaPredicted RBP10.98□□□□□ -0.65
PRPF18-201ENST00000320054 ZNF431Q8TF32 576 aaPredicted RBP10.98□□□□□ -0.65
PRPF18-201ENST00000320054 TP53RKQ96S44 253 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 SEC22CQ9BRL7 303 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 TMEM222Q9H0R3 208 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 MEGF9Q9H1U4 602 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 HILPDAQ9Y5L2 63 aa10.98□□□□□ -0.65
PRPF18-201ENST00000320054 A0A0B4J2A0 478 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 H0YJW9 148 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 LY6G6DO95868 133 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 OR5AC1P0C628 307 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 RPA2P15927 270 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 CD1BP29016 333 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 RAB13P51153 203 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 BRWD1-AS2P59051 145 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 LINC00205P59089 165 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 SRPXP78539 464 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 TMEM187Q14656 261 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 RTL8BQ17RB0 113 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 LIAT1Q6ZQX7 453 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 MOB3BQ86TA1 216 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 PDPNQ86YL7 162 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 SPAG16Q8N0X2 631 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 DYNAPQ8N1N2 210 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 LRTM2Q8N967 370 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 GLYATL2Q8WU03 294 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 MITD1Q8WV92 249 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 C17orf50Q8WW18 174 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 CFHR4Q92496 578 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 SHPKQ9UHJ6 478 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 WASHC3Q9Y3C0 194 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 ALG5Q9Y673 324 aa10.97□□□□□ -0.65
PRPF18-201ENST00000320054 SONP18583 2426 aaKnown RBP10.97□□□□□ -0.65
PRPF18-201ENST00000320054 A0A0A6YYJ9 748 aa10.96□□□□□ -0.65
PRPF18-201ENST00000320054 PIGBOS1A0A0B4J2F0 54 aa10.96□□□□□ -0.65
PRPF18-201ENST00000320054 A0A0U1RQK1 487 aa10.96□□□□□ -0.65
PRPF18-201ENST00000320054 TIMM23O14925 209 aa10.96□□□□□ -0.65
PRPF18-201ENST00000320054 CREBL2O60519 120 aaPredicted RBP10.96□□□□□ -0.65
PRPF18-201ENST00000320054 FCGR3BO75015 233 aa10.96□□□□□ -0.65
PRPF18-201ENST00000320054 CDS2O95674 445 aa10.96□□□□□ -0.65
PRPF18-201ENST00000320054 FBP1P09467 338 aa10.96□□□□□ -0.65
PRPF18-201ENST00000320054 HNF1AP20823 631 aa10.96□□□□□ -0.65
PRPF18-201ENST00000320054 BRS3P32247 399 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms