RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 CEACAM3P40198 252 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 HOXA4Q00056 320 aaPredicted RBP7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 COLCA1Q6ZS62 124 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 VKORC1L1Q8N0U8 176 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 ZNF645Q8N7E2 425 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 OR10Z1Q8NGY1 313 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 CRIM1Q9NZV1 1036 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 PSPNO60542 156 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 CIDEAO60543 219 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 FABP1P07148 127 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 TMEM65Q6PI78 240 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 SELENOHQ8IZQ5 122 aaKnown RBP7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 RNASE6Q93091 150 aaKnown RBP7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 GINS3Q9BRX5 216 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 FAM215AQ9Y5M1 114 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 MALRD1Q5VYJ5 2156 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 WNK1Q9H4A3 2382 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 IFNL4K9M1U5 179 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 PSMB3P49720 205 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 UCP3P55916 312 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 PRB3Q04118 309 aaPredicted RBP7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 RPL39P5Q59GN2 51 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 NCR3LG1Q68D85 454 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 LFNGQ8NES3 379 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 LRP4O75096 1905 aa7.83□□□□□ -1.16
TMEM39A-201ENST00000319172 NUDT19A8MXV4 375 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 MLNRO43193 412 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 S1PR2O95136 353 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 IGKV3-15P01624 115 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 ATP5J2P56134 94 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 ARF6P62330 175 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 RUNX1Q01196 453 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 GCSAMQ8N6F7 178 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 TMEM252Q8N6L7 170 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 FLYWCH2Q96CP2 140 aaKnown RBP7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 C1orf147Q96MC9 270 aaPredicted RBP7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 NIPSNAP3BQ9BS92 247 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 SIRT7Q9NRC8 400 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 KCNIP2Q9NS61 270 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 M0QZ24 198 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 OR7C2O60412 319 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 DEDDO75618 318 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 IGHV1-46P01743 117 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 MUC1P15941 1255 aaPredicted RBP7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 KIR2DS2P43631 304 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 UBE2G2P60604 165 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 TNXAQ16473 311 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 ZNF660Q6AZW8 331 aaPredicted RBP7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 DHRS11Q6UWP2 260 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 TPPP3Q9BW30 176 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 ACTR3CQ9C0K3 210 aaPredicted RBP7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 MSGN1A6NI15 193 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 FGF2P09038 288 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 OPRK1P41145 380 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 CD200P41217 278 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 THBS3P49746 956 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 ACOT6Q3I5F7 207 aaPredicted RBP7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 FFAR4Q5NUL3 377 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 LAMTOR1Q6IAA8 161 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 ZNF561Q8N587 486 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 RPUSD4Q96CM3 377 aaKnown RBP7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 MISP3Q96FF7 219 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 TMEM56Q96MV1 263 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 HILPDAQ9Y5L2 63 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 UMAD1C9J7I0 102 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 C1QL1O75973 258 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 SCAF4O95104 1147 aaKnown RBP7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 ZNF250P15622 560 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 RAB5CP51148 216 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 FGF8P55075 233 aaPredicted RBP7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 NANPQ8TBE9 248 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 PHYHIPLQ96FC7 376 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 SLC25A22Q9H936 323 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 IDI2-AS1Q9NZ38 188 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 METRNQ9UJH8 293 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 URGCP-MRPS24S4R325 110 aa7.82□□□□□ -1.16
TMEM39A-201ENST00000319172 BRS3P32247 399 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 AKR1C3P42330 323 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 SULT1A1P50225 295 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 ZNF345Q14585 488 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 ADIRFQ15847 76 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 TMEM88Q6PEY1 159 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 UHRF2Q96PU4 802 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 HEXA-AS1Q9H8Q6 139 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 DPRXA6NFQ7 191 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 F2RL2O00254 374 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 LY6G6FQ5SQ64 297 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 H1FOOQ8IZA3 346 aaPredicted RBP7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 OR4F5Q8NH21 305 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 OR4F4Q96R69 305 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 MED9Q9NWA0 146 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 JPT1Q9UK76 154 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 TM4SF5O14894 197 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 HPRT1P00492 218 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 CCL3L1P16619 93 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 CDKN1AP38936 164 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 PJVKQ0ZLH3 352 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 ZNF124Q15973 351 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 GUK1Q16774 197 aa7.81□□□□□ -1.16
TMEM39A-201ENST00000319172 NEUROG1Q92886 237 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms