RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SUPT4H1P63272 117 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 TPTE2P1Q5T6R2 138 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 CLEC9AQ6UXN8 241 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 ZNF833PQ6ZTB9 187 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 SGPP2Q8IWX5 399 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 ZNF383Q8NA42 475 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 NANPQ8TBE9 248 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 ST6GALNAC6Q969X2 333 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 MARVELD1Q9BSK0 173 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 TNFRSF19Q9NS68 423 aa12.45□□□□□ -0.42
PDLIM5-202ENST00000318007 IGHV1-3A0A0C4DH29 117 aa12.44□□□□□ -0.42
PDLIM5-202ENST00000318007 C3orf85A0A1B0GTC6 90 aa12.44□□□□□ -0.42
PDLIM5-202ENST00000318007 TIMM23O14925 209 aa12.44□□□□□ -0.42
PDLIM5-202ENST00000318007 DHRS2Q13268 280 aa12.44□□□□□ -0.42
PDLIM5-202ENST00000318007 FBLN7Q53RD9 439 aa12.44□□□□□ -0.42
PDLIM5-202ENST00000318007 SLC25A42Q86VD7 318 aa12.44□□□□□ -0.42
PDLIM5-202ENST00000318007 MS4A7Q9GZW8 240 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-202ENST00000318007 FAM96BQ9Y3D0 163 aa12.44□□□□□ -0.42
PDLIM5-202ENST00000318007 CRYM-AS1A6NIL9 109 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 ITGB1BP1O14713 200 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 IGKV1-16P04430 117 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 S100GP29377 79 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 HNF4GQ14541 408 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 TMEM128Q5BJH2 165 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 C8orf31Q8N9H6 132 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 CCDC71LQ8N9Z2 235 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 AKR1E2Q96JD6 320 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 TMUB1Q9BVT8 246 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 NAA60Q9H7X0 242 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 F8P00451 2351 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 LY6LH3BQJ8 138 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 F2RP25116 425 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 SRP14P37108 136 aaKnown RBP12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 CEACAM3P40198 252 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 LY6G6FQ5SQ64 297 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 VKORC1L1Q8N0U8 176 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 SPAG16Q8N0X2 631 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 ZNF486Q96H40 463 aaPredicted RBP12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 AJUBAQ96IF1 538 aa12.43□□□□□ -0.42
PDLIM5-202ENST00000318007 A0A0A6YYJ9 748 aa12.42□□□□□ -0.42
PDLIM5-202ENST00000318007 A0A1W2PPI3 338 aa12.42□□□□□ -0.42
PDLIM5-202ENST00000318007 CRYZL1O95825 349 aa12.42□□□□□ -0.42
PDLIM5-202ENST00000318007 DHFRP00374 187 aa12.42□□□□□ -0.42
PDLIM5-202ENST00000318007 GAPDHP04406 335 aaKnown RBP12.42□□□□□ -0.42
PDLIM5-202ENST00000318007 BRWD1-AS2P59051 145 aa12.42□□□□□ -0.42
PDLIM5-202ENST00000318007 TAGLNQ01995 201 aaKnown RBP12.42□□□□□ -0.42
PDLIM5-202ENST00000318007 EIF4EBP1Q13541 118 aaPredicted RBP12.42□□□□□ -0.42
PDLIM5-202ENST00000318007 HES1Q14469 280 aa12.42□□□□□ -0.42
PDLIM5-202ENST00000318007 SSX9Q7RTT3 188 aa12.42□□□□□ -0.42
PDLIM5-202ENST00000318007 NABP2Q9BQ15 211 aa12.42□□□□□ -0.42
PDLIM5-202ENST00000318007 NUP50Q9UKX7 468 aa12.42□□□□□ -0.42
PDLIM5-202ENST00000318007 ALG5Q9Y673 324 aa12.42□□□□□ -0.42
PDLIM5-202ENST00000318007 HIVEP2P31629 2446 aa12.42□□□□□ -0.42
PDLIM5-202ENST00000318007 C9orf170A2RU37 121 aa12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 SLC22A5O76082 557 aa12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 CATR1Q13166 79 aa12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 RITA1Q96K30 269 aa12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 HSD17B10Q99714 261 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 S1PR2O95136 353 aa12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 IFNA2P01563 188 aa12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 ZNF137PP52743 207 aa12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 DEFB112Q30KQ8 113 aa12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 ANKRD55Q3KP44 614 aa12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 MIDNQ504T8 468 aa12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 DUX5Q96PT3 197 aa12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 SLC35D1Q9NTN3 355 aa12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 LIN7CQ9NUP9 197 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 TBL2Q9Y4P3 447 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-202ENST00000318007 INAFM1C9JVW0 142 aa12.4□□□□□ -0.42
PDLIM5-202ENST00000318007 H0YJW9 148 aa12.4□□□□□ -0.42
PDLIM5-202ENST00000318007 IGKV1D-33P01593 117 aa12.4□□□□□ -0.42
PDLIM5-202ENST00000318007 IGKV1-33P01594 117 aa12.4□□□□□ -0.42
PDLIM5-202ENST00000318007 SERPINE2P07093 398 aa12.4□□□□□ -0.42
PDLIM5-202ENST00000318007 TAS2R31P59538 309 aa12.4□□□□□ -0.42
PDLIM5-202ENST00000318007 MINOS1Q5TGZ0 78 aa12.4□□□□□ -0.42
PDLIM5-202ENST00000318007 ZNF66Q6ZN08 573 aa12.4□□□□□ -0.42
PDLIM5-202ENST00000318007 LYG2Q86SG7 212 aa12.4□□□□□ -0.42
PDLIM5-202ENST00000318007 LHFPL5Q8TAF8 219 aa12.4□□□□□ -0.42
PDLIM5-202ENST00000318007 GLYATL2Q8WU03 294 aa12.4□□□□□ -0.42
PDLIM5-202ENST00000318007 KCNIP3Q9Y2W7 256 aa12.4□□□□□ -0.42
PDLIM5-202ENST00000318007 MINOS1-NBL1R4GNA1 71 aa12.4□□□□□ -0.42
PDLIM5-202ENST00000318007 TEP1Q99973 2627 aaKnown RBP12.4□□□□□ -0.42
PDLIM5-202ENST00000318007 CCSO14618 274 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 KRASP01116 189 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 CNTFRP26992 372 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 THBS3P49746 956 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 LY6EQ16553 131 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 IZUMO4Q1ZYL8 232 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 FAM219AQ8IW50 185 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 ZBTB34Q8NCN2 500 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 MALSU1Q96EH3 234 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 GHITMQ9H3K2 345 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 PRELID3BQ9Y3B1 194 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 RNF212BA8MTL3 300 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 SSNA1O43805 119 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 SFT2D2O95562 160 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 APOA2P02652 100 aa12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 SNRNP70P08621 437 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-202ENST00000318007 G6PCP35575 357 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms