RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 B9D2Q9BPU9 175 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 PLEKHJ1Q9NW61 149 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 PIPOXQ9P0Z9 390 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 SLC23A1Q9UHI7 598 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 ADAM30Q9UKF2 790 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 A3GALT2U3KPV4 340 aa12.12□□□□□ -0.47
FOXR1-201ENST00000317011 TRAV18A0A075B6X5 111 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 G3V318 75 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 RAB29O14966 203 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 NBR2O15453 112 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 SCGNO76038 276 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 S100A5P33763 92 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 DGCR2P98153 550 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 DEFB136Q30KP8 78 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 TMEM69Q5SWH9 247 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 CNIH2Q6PI25 160 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 OR2AK2Q8NG84 335 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 OR5AN1Q8NGI8 311 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 CMTM3Q96MX0 182 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 RNF5Q99942 180 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 PECRQ9BY49 303 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 DIABLOQ9NR28 239 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 EXTL2Q9UBQ6 330 aa12.11□□□□□ -0.47
FOXR1-201ENST00000317011 LSM4Q9Y4Z0 139 aaKnown RBP12.11□□□□□ -0.47
FOXR1-201ENST00000317011 EGR2P11161 476 aaPredicted RBP12.1□□□□□ -0.47
FOXR1-201ENST00000317011 HIST1H1DP16402 221 aaKnown RBP12.1□□□□□ -0.47
FOXR1-201ENST00000317011 GNB3P16520 340 aa12.1□□□□□ -0.47
FOXR1-201ENST00000317011 TALDO1P37837 337 aa12.1□□□□□ -0.47
FOXR1-201ENST00000317011 RAB9AP51151 201 aa12.1□□□□□ -0.47
FOXR1-201ENST00000317011 ASPHD1Q5U4P2 390 aa12.1□□□□□ -0.47
FOXR1-201ENST00000317011 ZNF660Q6AZW8 331 aaPredicted RBP12.1□□□□□ -0.47
FOXR1-201ENST00000317011 MOB1BQ7L9L4 216 aa12.1□□□□□ -0.47
FOXR1-201ENST00000317011 OR5M8Q8NGP6 311 aa12.1□□□□□ -0.47
FOXR1-201ENST00000317011 DIRAS2Q96HU8 199 aa12.1□□□□□ -0.47
FOXR1-201ENST00000317011 TOLLIPQ9H0E2 274 aa12.1□□□□□ -0.47
FOXR1-201ENST00000317011 PARP12Q9H0J9 701 aaKnown RBP12.1□□□□□ -0.47
FOXR1-201ENST00000317011 AK3Q9UIJ7 227 aa12.1□□□□□ -0.47
FOXR1-201ENST00000317011 NUBP2Q9Y5Y2 271 aa12.1□□□□□ -0.47
FOXR1-201ENST00000317011 WSB1Q9Y6I7 421 aa12.1□□□□□ -0.47
FOXR1-201ENST00000317011 A0A0A6YYH2 397 aa12.09□□□□□ -0.47
FOXR1-201ENST00000317011 A6NJ64 397 aa12.09□□□□□ -0.47
FOXR1-201ENST00000317011 MFNGO00587 321 aa12.09□□□□□ -0.47
FOXR1-201ENST00000317011 ATP6V0E1O15342 81 aa12.09□□□□□ -0.47
FOXR1-201ENST00000317011 ST8SIA5O15466 376 aa12.09□□□□□ -0.47
FOXR1-201ENST00000317011 TNFSF8P32971 234 aa12.09□□□□□ -0.47
FOXR1-201ENST00000317011 MC5RP33032 325 aa12.09□□□□□ -0.47
FOXR1-201ENST00000317011 TAS2R20P59543 309 aa12.09□□□□□ -0.47
FOXR1-201ENST00000317011 DCTN2Q13561 401 aaKnown RBP12.09□□□□□ -0.47
FOXR1-201ENST00000317011 C9orf66Q5T8R8 295 aa12.09□□□□□ -0.47
FOXR1-201ENST00000317011 OR11H1Q8NG94 326 aa12.09□□□□□ -0.47
FOXR1-201ENST00000317011 OR6Q1Q8NGQ2 317 aa12.09□□□□□ -0.47
FOXR1-201ENST00000317011 IL1F10Q8WWZ1 152 aa12.09□□□□□ -0.47
FOXR1-201ENST00000317011 C11orf54Q9H0W9 315 aaPredicted RBP12.09□□□□□ -0.47
FOXR1-201ENST00000317011 Q9N2K0 584 aa12.09□□□□□ -0.47
FOXR1-201ENST00000317011 MGAT4AQ9UM21 535 aa12.09□□□□□ -0.47
FOXR1-201ENST00000317011 MRPS7Q9Y2R9 242 aaKnown RBP12.09□□□□□ -0.47
FOXR1-201ENST00000317011 TRAV41A0A0B4J266 112 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 TMEM235A6NFC5 223 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 OR5H14A6NHG9 310 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 H0YJW9 148 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 FCN1O00602 326 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 XRCC3O43542 346 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 PTHLHP12272 177 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 CX3CL1P78423 397 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 CDNFQ49AH0 187 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 RPL39P5Q59GN2 51 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 C11orf87Q6NUJ2 197 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 SNX29P2Q8IUI4 249 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 HDHD3Q9BSH5 251 aaPredicted RBP12.08□□□□□ -0.48
FOXR1-201ENST00000317011 GNB4Q9HAV0 340 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 TPSG1Q9NRR2 321 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 ELF5Q9UKW6 265 aaPredicted RBP12.08□□□□□ -0.48
FOXR1-201ENST00000317011 VSIG4Q9Y279 399 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 KCNK7Q9Y2U2 307 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 FBXO7Q9Y3I1 522 aa12.08□□□□□ -0.48
FOXR1-201ENST00000317011 IGKV1-6A0A0C4DH72 117 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 RRHO14718 337 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 SOX15O60248 233 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 RBBP9O75884 186 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 SCTP09683 121 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 ZBTB25P24278 435 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 CEACAM6P40199 344 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 LUMP51884 338 aaPredicted RBP12.07□□□□□ -0.48
FOXR1-201ENST00000317011 NDPQ00604 133 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 ARFRP1Q13795 201 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 ZNF260Q3ZCT1 412 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 TMEM65Q6PI78 240 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 OR1N2Q8NGR9 330 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 NUDCD2Q8WVJ2 157 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 ABHD14BQ96IU4 210 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 AUNIPQ9H7T9 357 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 CHMP1AQ9HD42 196 aaPredicted RBP12.07□□□□□ -0.48
FOXR1-201ENST00000317011 GAB2Q9UQC2 676 aa12.07□□□□□ -0.48
FOXR1-201ENST00000317011 HUWE1Q7Z6Z7 4374 aaKnown RBP12.07□□□□□ -0.48
FOXR1-201ENST00000317011 TENM3Q9P273 2699 aa12.06□□□□□ -0.48
FOXR1-201ENST00000317011 GSTP1P09211 210 aaKnown RBP12.06□□□□□ -0.48
FOXR1-201ENST00000317011 CD3GP09693 182 aa12.06□□□□□ -0.48
FOXR1-201ENST00000317011 INSL3P51460 131 aa12.06□□□□□ -0.48
FOXR1-201ENST00000317011 GNG2P59768 71 aa12.06□□□□□ -0.48
FOXR1-201ENST00000317011 HLA-DRB3P79483 266 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms