RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 ZNF506Q5JVG8 444 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 Q6ZR03 302 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 OR52L2PQ8NGH6 319 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 RNASE6Q93091 150 aaKnown RBP11.82□□□□□ -0.52
VRK3-201ENST00000316763 COQ2Q96H96 371 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 PARD6GQ9BYG4 376 aaPredicted RBP11.82□□□□□ -0.52
VRK3-201ENST00000316763 FZR1Q9UM11 496 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 HSPB1P04792 205 aaKnown RBP11.82□□□□□ -0.52
VRK3-201ENST00000316763 GRNP28799 593 aaKnown RBP11.82□□□□□ -0.52
VRK3-201ENST00000316763 HOXA1P49639 335 aaPredicted RBP11.82□□□□□ -0.52
VRK3-201ENST00000316763 UBE2KP61086 200 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 COL10A1Q03692 680 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 TFF3Q07654 80 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 HAGHQ16775 308 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 SP5Q6BEB4 398 aaPredicted RBP11.82□□□□□ -0.52
VRK3-201ENST00000316763 WFDC8Q8IUA0 241 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 ZNF525Q8N782 197 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 NUP37Q8NFH4 326 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 MRGPRDQ8TDS7 321 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 HIST1H2BAQ96A08 127 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 C20orf24Q9BUV8 137 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 MSL2Q9HCI7 577 aa11.82□□□□□ -0.52
VRK3-201ENST00000316763 HEATR1Q9H583 2144 aaKnown RBP11.81□□□□□ -0.52
VRK3-201ENST00000316763 DPRXA6NFQ7 191 aa11.81□□□□□ -0.52
VRK3-201ENST00000316763 SPINT2O43291 252 aa11.81□□□□□ -0.52
VRK3-201ENST00000316763 SCAF4O95104 1147 aaKnown RBP11.81□□□□□ -0.52
VRK3-201ENST00000316763 SRP19P09132 144 aaKnown RBP11.81□□□□□ -0.52
VRK3-201ENST00000316763 SERF2P84101 59 aa11.81□□□□□ -0.52
VRK3-201ENST00000316763 TNFRSF9Q07011 255 aa11.81□□□□□ -0.52
VRK3-201ENST00000316763 LRRC75BQ2VPJ9 315 aa11.81□□□□□ -0.52
VRK3-201ENST00000316763 KHDC3LQ587J8 217 aa11.81□□□□□ -0.52
VRK3-201ENST00000316763 SPANXN5Q5MJ07 72 aa11.81□□□□□ -0.52
VRK3-201ENST00000316763 LRRC29Q8WV35 223 aa11.81□□□□□ -0.52
VRK3-201ENST00000316763 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.81□□□□□ -0.52
VRK3-201ENST00000316763 LAMP3Q9UQV4 416 aa11.81□□□□□ -0.52
VRK3-201ENST00000316763 PUS1Q9Y606 427 aaKnown RBP eCLIP11.81□□□□□ -0.52
VRK3-201ENST00000316763 CADP27708 2225 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 USP9XQ93008 2570 aaPredicted RBP11.8□□□□□ -0.52
VRK3-201ENST00000316763 IGLV3-9A0A075B6K5 115 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 PTBP3O95758 552 aaKnown RBP11.8□□□□□ -0.52
VRK3-201ENST00000316763 IGHV3-13P01766 116 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 RPS23P62266 143 aaKnown RBP11.8□□□□□ -0.52
VRK3-201ENST00000316763 ICAM4Q14773 271 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 ZNF66Q6ZN08 573 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 LINC00518Q8N0U6 118 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 ZNF561Q8N587 486 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 TCTEX1D2Q8WW35 142 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 RBKSQ9H477 322 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 CLDN1O95832 211 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 ADH4P08319 380 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 GLIPR1P48060 266 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 AKR1D1P51857 326 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 PAX5Q02548 391 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 ZNF816Q0VGE8 651 aaPredicted RBP11.8□□□□□ -0.52
VRK3-201ENST00000316763 EIF4EBP1Q13541 118 aaPredicted RBP11.8□□□□□ -0.52
VRK3-201ENST00000316763 CLDND2Q8NHS1 167 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 PPP1R35Q8TAP8 253 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 PINX1Q96BK5 328 aaKnown RBP11.8□□□□□ -0.52
VRK3-201ENST00000316763 HSD17B10Q99714 261 aaKnown RBP11.8□□□□□ -0.52
VRK3-201ENST00000316763 RSG1Q9BU20 258 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 NGBQ9NPG2 151 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 HSPB7Q9UBY9 170 aa11.8□□□□□ -0.52
VRK3-201ENST00000316763 RAB29O14966 203 aa11.79□□□□□ -0.52
VRK3-201ENST00000316763 KRASP01116 189 aa11.79□□□□□ -0.52
VRK3-201ENST00000316763 IFNA4P05014 189 aa11.79□□□□□ -0.52
VRK3-201ENST00000316763 PRDX2P32119 198 aa11.79□□□□□ -0.52
VRK3-201ENST00000316763 G6PCP35575 357 aa11.79□□□□□ -0.52
VRK3-201ENST00000316763 HTD2P86397 168 aa11.79□□□□□ -0.52
VRK3-201ENST00000316763 BSPH1Q075Z2 132 aa11.79□□□□□ -0.52
VRK3-201ENST00000316763 SLC38A11Q08AI6 406 aa11.79□□□□□ -0.52
VRK3-201ENST00000316763 ARL16Q0P5N6 197 aa11.79□□□□□ -0.52
VRK3-201ENST00000316763 ATP6V1FQ16864 119 aa11.79□□□□□ -0.52
VRK3-201ENST00000316763 LRP11Q86VZ4 500 aa11.79□□□□□ -0.52
VRK3-201ENST00000316763 FAM90A1Q86YD7 464 aa11.79□□□□□ -0.52
VRK3-201ENST00000316763 ZFP82Q8N141 532 aa11.79□□□□□ -0.52
VRK3-201ENST00000316763 OR2Z1Q8NG97 314 aa11.79□□□□□ -0.52
VRK3-201ENST00000316763 ADGRG4Q8IZF6 3080 aa11.79□□□□□ -0.52
VRK3-201ENST00000316763 A0A1W2PPH5 198 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 LRRC30A6NM36 301 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 H3BQ15 152 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 PPIHO43447 177 aaKnown RBP11.78□□□□□ -0.52
VRK3-201ENST00000316763 RAMP3O60896 148 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 P0C879 139 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 DAOP14920 347 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 CEBPGP53567 150 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 KLF3P57682 345 aaPredicted RBP11.78□□□□□ -0.52
VRK3-201ENST00000316763 RPL30P62888 115 aaKnown RBP11.78□□□□□ -0.52
VRK3-201ENST00000316763 HAPLN4Q86UW8 402 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 OR10G4Q8NGN3 311 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 OR13A1Q8NGR1 328 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 C2CD4CQ8TF44 421 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 FAM216AQ8WUB2 273 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 MBD3L1Q8WWY6 194 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 EDARADDQ8WWZ3 215 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 CIB3Q96Q77 187 aaPredicted RBP11.78□□□□□ -0.52
VRK3-201ENST00000316763 WDR61Q9GZS3 305 aaKnown RBP11.78□□□□□ -0.52
VRK3-201ENST00000316763 ESRP2Q9H6T0 727 aaKnown RBP11.78□□□□□ -0.52
VRK3-201ENST00000316763 SEBOXQ9HB31 216 aaPredicted RBP11.78□□□□□ -0.52
VRK3-201ENST00000316763 RPRMQ9NS64 109 aa11.78□□□□□ -0.52
VRK3-201ENST00000316763 LOC102723971A0A1B0GUV8 181 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms