RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 KIAA1456Q9P272 454 aa12.26□□□□□ -0.45
CLK4-201ENST00000316308 ASH1LQ9NR48 2969 aaKnown RBP12.26□□□□□ -0.45
CLK4-201ENST00000316308 DSCAML1Q8TD84 2053 aa12.26□□□□□ -0.45
CLK4-201ENST00000316308 PCP4L1A6NKN8 68 aa12.26□□□□□ -0.45
CLK4-201ENST00000316308 LRRC30A6NM36 301 aa12.26□□□□□ -0.45
CLK4-201ENST00000316308 H3BQ15 152 aa12.26□□□□□ -0.45
CLK4-201ENST00000316308 OR9G9P0C7N8 305 aa12.26□□□□□ -0.45
CLK4-201ENST00000316308 RAB2AP61019 212 aa12.26□□□□□ -0.45
CLK4-201ENST00000316308 RPS23P62266 143 aaKnown RBP12.26□□□□□ -0.45
CLK4-201ENST00000316308 TMPRSS5Q9H3S3 457 aa12.26□□□□□ -0.45
CLK4-201ENST00000316308 HSPB7Q9UBY9 170 aa12.26□□□□□ -0.45
CLK4-201ENST00000316308 TPRP12270 2363 aaKnown RBP12.26□□□□□ -0.45
CLK4-201ENST00000316308 RAI1Q7Z5J4 1906 aaPredicted RBP12.26□□□□□ -0.45
CLK4-201ENST00000316308 TRAV3A0A0B4J244 114 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 RBMXL2O75526 392 aaKnown RBP12.25□□□□□ -0.45
CLK4-201ENST00000316308 CYB5R3P00387 301 aaPredicted RBP12.25□□□□□ -0.45
CLK4-201ENST00000316308 CCKARP32238 428 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 NKX6-1P78426 367 aaPredicted RBP12.25□□□□□ -0.45
CLK4-201ENST00000316308 TFF3Q07654 80 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 SLC38A11Q08AI6 406 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 LRRC75BQ2VPJ9 315 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 IGFL3Q6UXB1 125 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 RAB39BQ96DA2 213 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 RCC1LQ96I51 464 aaKnown RBP12.25□□□□□ -0.45
CLK4-201ENST00000316308 WDR61Q9GZS3 305 aaKnown RBP12.25□□□□□ -0.45
CLK4-201ENST00000316308 PTPRQQ9UMZ3 2332 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 PMS2P5A8MQ11 134 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 SNRPEP62304 92 aaKnown RBP12.25□□□□□ -0.45
CLK4-201ENST00000316308 ACSM6Q6P461 480 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 IGF2-ASQ6U949 168 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 TMEM14EPQ6UXP3 125 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 RPP25LQ8N5L8 163 aaKnown RBP12.25□□□□□ -0.45
CLK4-201ENST00000316308 MEGF10Q96KG7 1140 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 QTRT1Q9BXR0 403 aaKnown RBP12.25□□□□□ -0.45
CLK4-201ENST00000316308 GNG12Q9UBI6 72 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 A0A1B0GWJ7 208 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 MARCH11A6NNE9 402 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 FCGR3BO75015 233 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 DFFBO76075 338 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 LFNGQ8NES3 379 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 SCGB1C1Q8TD33 95 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 URGCP-MRPS24S4R325 110 aa12.25□□□□□ -0.45
CLK4-201ENST00000316308 IFNL4K9M1U5 179 aa12.24□□□□□ -0.45
CLK4-201ENST00000316308 PPIHO43447 177 aaKnown RBP12.24□□□□□ -0.45
CLK4-201ENST00000316308 CRYAAP02489 173 aa12.24□□□□□ -0.45
CLK4-201ENST00000316308 CD200P41217 278 aa12.24□□□□□ -0.45
CLK4-201ENST00000316308 LOXL3P58215 753 aa12.24□□□□□ -0.45
CLK4-201ENST00000316308 MORN2Q502X0 79 aa12.24□□□□□ -0.45
CLK4-201ENST00000316308 ADAM5Q6NVV9 412 aa12.24□□□□□ -0.45
CLK4-201ENST00000316308 LINC00518Q8N0U6 118 aa12.24□□□□□ -0.45
CLK4-201ENST00000316308 GATAD1Q8WUU5 269 aa12.24□□□□□ -0.45
CLK4-201ENST00000316308 A0A1B0GW64 132 aa12.24□□□□□ -0.45
CLK4-201ENST00000316308 KLF3P57682 345 aaPredicted RBP12.24□□□□□ -0.45
CLK4-201ENST00000316308 TIMM23BQ5SRD1 257 aa12.24□□□□□ -0.45
CLK4-201ENST00000316308 C1orf185Q5T7R7 199 aa12.24□□□□□ -0.45
CLK4-201ENST00000316308 FAM90A1Q86YD7 464 aa12.24□□□□□ -0.45
CLK4-201ENST00000316308 TAF15Q92804 592 aaKnown RBP eCLIP12.24□□□□□ -0.45
CLK4-201ENST00000316308 LURAP1Q96LR2 239 aa12.24□□□□□ -0.45
CLK4-201ENST00000316308 EGLN1Q9GZT9 426 aa12.24□□□□□ -0.45
CLK4-201ENST00000316308 DYSFO75923 2080 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 MMP23AO75900 390 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 DUTP33316 252 aaKnown RBP12.23□□□□□ -0.45
CLK4-201ENST00000316308 TLE4Q04727 773 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 RTP5Q14D33 572 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 ZNF787Q6DD87 383 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 ZNF429Q86V71 674 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 C15orf54Q8N8G6 183 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 DTD1Q8TEA8 209 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 TOLLIPQ9H0E2 274 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 RNF212BA8MTL3 300 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 MYOD1P15172 320 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 DLK1P80370 383 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 PRR30Q53SZ7 412 aaPredicted RBP12.23□□□□□ -0.45
CLK4-201ENST00000316308 ZNF506Q5JVG8 444 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 H2BFWTQ7Z2G1 175 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 ABHD17AQ96GS6 310 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 SLC25A22Q9H936 323 aa12.23□□□□□ -0.45
CLK4-201ENST00000316308 LOC102723971A0A1B0GUV8 181 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 SPINT2O43291 252 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 LHBP01229 141 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 RAB11AP62491 216 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 GCSAMLQ5JQS6 135 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 FAM216BQ8N7L0 139 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 GCM1Q9NP62 436 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.22□□□□□ -0.45
CLK4-201ENST00000316308 COA4Q9NYJ1 87 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 M0R1X1 148 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 CLDN14O95500 239 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 GLRXP35754 106 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 GPR12P47775 334 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 CATR1Q13166 79 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 FAM90A2PQ658T7 463 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 TCF23Q7RTU1 214 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 CISD2Q8N5K1 135 aaKnown RBP12.22□□□□□ -0.45
CLK4-201ENST00000316308 R3HDM4Q96D70 268 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 IFI27L2Q9H2X8 130 aa12.22□□□□□ -0.45
CLK4-201ENST00000316308 A8MXE2 369 aa12.21□□□□□ -0.45
CLK4-201ENST00000316308 HBG1P69891 147 aa12.21□□□□□ -0.45
CLK4-201ENST00000316308 HBG2P69892 147 aa12.21□□□□□ -0.45
CLK4-201ENST00000316308 CCL8P80075 99 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms