RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PCSK4Q6UW60 755 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 C9orf106Q8NAJ2 232 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 MRPL30Q8TCC3 161 aaKnown RBP14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 RP1L1Q8IWN7 2480 aaPredicted RBP14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 FAM90A10PA6NDY2 464 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 FAM90A18PA6NE21 464 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 FAM90A16PA6NEW6 464 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 FAM90A20PA6NIJ5 464 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 FAM90A8PA6NJQ4 464 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 FAM90A7PA6NKC0 464 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 FAM90A22PA8MWA6 464 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 FAM90A12PA8MX19 464 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 FAM90A5PA8MXJ8 464 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 FAM90A23PA8MXZ1 464 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 SOX15O60248 233 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 LYZL6O75951 148 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 IGKV1-39P01597 117 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 IGKV1D-39P04432 117 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 FAM90A15PP0C7V4 464 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 FAM90A13PP0C7W8 464 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 FAM90A14PP0C7W9 464 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 FAM90A24PP0C7X0 464 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 TECTBQ96PL2 329 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 SLC25A22Q9H936 323 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 CLCF1Q9UBD9 225 aa14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 ERRFI1Q9UJM3 462 aaPredicted RBP14.48□□□□□ -0.09
SCAMP4-201ENST00000316097 COX5BP10606 129 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 SLC25A6P12236 298 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 GPM6AP51674 278 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 FGF12P61328 243 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 VWA1Q6PCB0 445 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 C20orf204Q6ZNR8 217 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 RBMXL3Q8N7X1 1067 aaKnown RBP14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 TAF15Q92804 592 aaKnown RBP eCLIP14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 CRIM1Q9NZV1 1036 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 A0A1B0GWJ7 208 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 SCGB1D1O95968 90 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 PSMB3P49720 205 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 OR5T1Q8NG75 326 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 OR56B2PQ8NGI1 322 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 OR2T10Q8NGZ9 312 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 OR4F5Q8NH21 305 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 GATAD1Q8WUU5 269 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 OR4F4Q96R69 305 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 FGF23Q9GZV9 251 aaPredicted RBP14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 OR2W1Q9Y3N9 320 aa14.47□□□□□ -0.09
SCAMP4-201ENST00000316097 ACOT6Q3I5F7 207 aaPredicted RBP14.46□□□□□ -0.09
SCAMP4-201ENST00000316097 OR8G2PQ6IF36 304 aa14.46□□□□□ -0.09
SCAMP4-201ENST00000316097 CENPVQ7Z7K6 275 aaPredicted RBP14.46□□□□□ -0.09
SCAMP4-201ENST00000316097 Q8NFD4 153 aa14.46□□□□□ -0.09
SCAMP4-201ENST00000316097 GMPPAQ96IJ6 420 aaPredicted RBP14.46□□□□□ -0.09
SCAMP4-201ENST00000316097 M0R143 59 aa14.46□□□□□ -0.1
SCAMP4-201ENST00000316097 CCKARP32238 428 aa14.46□□□□□ -0.1
SCAMP4-201ENST00000316097 ZNF324BQ6AW86 544 aaPredicted RBP14.46□□□□□ -0.1
SCAMP4-201ENST00000316097 MYPOPQ86VE0 399 aaPredicted RBP14.46□□□□□ -0.1
SCAMP4-201ENST00000316097 RPRMLQ8N4K4 120 aa14.46□□□□□ -0.1
SCAMP4-201ENST00000316097 OR10J5Q8NHC4 309 aa14.46□□□□□ -0.1
SCAMP4-201ENST00000316097 IL1F10Q8WWZ1 152 aa14.46□□□□□ -0.1
SCAMP4-201ENST00000316097 ABHD17AQ96GS6 310 aa14.46□□□□□ -0.1
SCAMP4-201ENST00000316097 OR6C3Q9NZP0 311 aa14.46□□□□□ -0.1
SCAMP4-201ENST00000316097 TMEM250H0YL14 139 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 AQP7O14520 342 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 IGKV1-5P01602 117 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 GYPAP02724 150 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 ZNF16P17020 682 aaPredicted RBP14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 PRDX4Q13162 271 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 SPACA3Q8IXA5 215 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 ZNF71Q9NQZ8 489 aaPredicted RBP14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 MTCH1Q9NZJ7 389 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 ARHGAP21Q5T5U3 1957 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 PRR14LQ5THK1 2151 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 CELA3BP08861 270 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 ERVFC1-1P60608 527 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 SLC38A11Q08AI6 406 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 IGFL3Q6UXB1 125 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 GBGT1Q8N5D6 347 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 FKBP11Q9NYL4 201 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 IGF2RP11717 2491 aa14.45□□□□□ -0.1
SCAMP4-201ENST00000316097 HS3ST1O14792 307 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 GGCTO75223 188 aaKnown RBP14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 ZNF25P17030 456 aaPredicted RBP14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 IGHV1-2P23083 117 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 CNN1P51911 297 aaKnown RBP14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 NRN1LQ496H8 165 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 ACSM6Q6P461 480 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 Q6ZS92 163 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 FAM214BQ7L5A3 538 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 MDP1Q86V88 176 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 OR10V1Q8NGI7 309 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 RDH5Q92781 318 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 BCL2L2Q92843 193 aaPredicted RBP14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 SARAFQ96BY9 339 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 ANAPC16Q96DE5 110 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 DKK4Q9UBT3 224 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 PPP1R3CQ9UQK1 317 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 C3orf80F5H4A9 247 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 TRAPPC2LH3BP13 241 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 KIR2DL2P43627 348 aaPredicted RBP14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 IGFBP7Q16270 282 aa14.44□□□□□ -0.1
SCAMP4-201ENST00000316097 LSM10Q969L4 123 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms