RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CMTM1Q8IZ96 169 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 MRPL30Q8TCC3 161 aaKnown RBP6.39□□□□□ -1.39
TRIM55-202ENST00000315962 MRGPRDQ8TDS7 321 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 C14orf144Q96I85 54 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 TECTBQ96PL2 329 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 PRDM13Q9H4Q3 707 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 IL36GQ9NZH8 169 aa6.39□□□□□ -1.39
TRIM55-202ENST00000315962 PHOX2AO14813 284 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 CNOT4O95628 575 aaKnown RBP6.38□□□□□ -1.39
TRIM55-202ENST00000315962 GLIPR1P48060 266 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 HMGN3Q15651 99 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 AKR1C8PQ5T2L2 129 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 WDR82Q6UXN9 313 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 MOGAT3Q86VF5 341 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 OR10V1Q8NGI7 309 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 RNASE11Q8TAA1 199 aaKnown RBP6.38□□□□□ -1.39
TRIM55-202ENST00000315962 ABHD5Q8WTS1 349 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 LRRC29Q8WV35 223 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 NEUROG1Q92886 237 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 OR2V2Q96R30 315 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 TCEAL7Q9BRU2 100 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 HRNRQ86YZ3 2850 aaPredicted RBP6.38□□□□□ -1.39
TRIM55-202ENST00000315962 MYO18BQ8IUG5 2567 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 IQCF6A8MYZ5 107 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 PPP1R2P9O14990 202 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 MPPED1O15442 326 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 HAND1O96004 215 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 NAPSAO96009 420 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 EGR1P18146 543 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 DTYMKP23919 212 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 COL8A2P25067 703 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 SSTR5P35346 364 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 CDX1P47902 265 aaPredicted RBP6.38□□□□□ -1.39
TRIM55-202ENST00000315962 TDGF1P3P51864 188 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 ARL6IP1Q15041 203 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 CDSNQ15517 529 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 UTF1Q5T230 341 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 TMEM211Q6ICI0 200 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 Q6P435 159 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 FGFRL1Q8N441 504 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 OR4D5Q8NGN0 318 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 NIPSNAP3BQ9BS92 247 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 ARV1Q9H2C2 271 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 KCNS2Q9ULS6 477 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 MSRB2Q9Y3D2 182 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 POMT1Q9Y6A1 747 aa6.38□□□□□ -1.39
TRIM55-202ENST00000315962 LRP5LA4QPB2 252 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 SOX15O60248 233 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 METTL15P1P0C7V9 234 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 PAX6P26367 422 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 KRTCAP3Q53RY4 240 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 ZNF808Q8N4W9 903 aaPredicted RBP6.37□□□□□ -1.39
TRIM55-202ENST00000315962 OR10J5Q8NHC4 309 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 LEAP2Q969E1 77 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 YPEL4Q96NS1 127 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 MRPL37Q9BZE1 423 aaKnown RBP6.37□□□□□ -1.39
TRIM55-202ENST00000315962 GAB2Q9UQC2 676 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 ZNF729A6NN14 1252 aaPredicted RBP6.37□□□□□ -1.39
TRIM55-202ENST00000315962 FAM90A27PA6NNH2 459 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 ZNF705GA8MUZ8 300 aaPredicted RBP6.37□□□□□ -1.39
TRIM55-202ENST00000315962 TRDCB7Z8K6 153 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 SH2D1BO14796 132 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 CYB5R3P00387 301 aaPredicted RBP6.37□□□□□ -1.39
TRIM55-202ENST00000315962 IGLV1-44P01699 117 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 CEACAM6P40199 344 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 EDDM3BP56851 147 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 COL10A1Q03692 680 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 TESK1Q15569 626 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 USF2Q15853 346 aaPredicted RBP6.37□□□□□ -1.39
TRIM55-202ENST00000315962 ZNF324BQ6AW86 544 aaPredicted RBP6.37□□□□□ -1.39
TRIM55-202ENST00000315962 BTNL3Q6UXE8 466 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 SSX9Q7RTT3 188 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 OR52L2PQ8NGH6 319 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 OR1L1Q8NH94 360 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 LINC01560Q8TB33 94 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 FAM234AQ9H0X4 552 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 TAAR3PQ9P1P4 343 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 ATP23Q9Y6H3 246 aa6.37□□□□□ -1.39
TRIM55-202ENST00000315962 TUSC2O75896 110 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 TIMP3P35625 211 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 OR3A1P47881 315 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 BSPH1Q075Z2 132 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 IL13RA2Q14627 380 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 SPINK9Q5DT21 86 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 TIMM23BQ5SRD1 257 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 PCSK4Q6UW60 755 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 DPPA2Q7Z7J5 298 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 HIST3H2BBQ8N257 126 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 GATAD1Q8WUU5 269 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 ITLN1Q8WWA0 313 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 MOB3AQ96BX8 217 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 RPUSD4Q96CM3 377 aaKnown RBP6.36□□□□□ -1.39
TRIM55-202ENST00000315962 GALNT14Q96FL9 552 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 ATG101Q9BSB4 218 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 ELOVL1Q9BW60 279 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 OPA3Q9H6K4 179 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 GFOD1Q9NXC2 390 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 POLDIP2Q9Y2S7 368 aa6.36□□□□□ -1.39
TRIM55-202ENST00000315962 STRAPQ9Y3F4 350 aaKnown RBP6.36□□□□□ -1.39
TRIM55-202ENST00000315962 DMRT1Q9Y5R6 373 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms