RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 LCN15Q6UWW0 184 aa12.47□□□□□ -0.41
CHFR-202ENST00000315585 ZNF808Q8N4W9 903 aaPredicted RBP12.47□□□□□ -0.41
CHFR-202ENST00000315585 DTD1Q8TEA8 209 aa12.47□□□□□ -0.41
CHFR-202ENST00000315585 ODAMA1E959 279 aa12.46□□□□□ -0.41
CHFR-202ENST00000315585 MAP1LC3B2A6NCE7 125 aa12.46□□□□□ -0.41
CHFR-202ENST00000315585 PRDX2P32119 198 aa12.46□□□□□ -0.41
CHFR-202ENST00000315585 ZNF816Q0VGE8 651 aaPredicted RBP12.46□□□□□ -0.41
CHFR-202ENST00000315585 PRAMEF6Q5VXH4 476 aa12.46□□□□□ -0.41
CHFR-202ENST00000315585 OR8G2PQ6IF36 304 aa12.46□□□□□ -0.41
CHFR-202ENST00000315585 OR13D1Q8NGV5 346 aa12.46□□□□□ -0.41
CHFR-202ENST00000315585 LRRC29Q8WV35 223 aa12.46□□□□□ -0.41
CHFR-202ENST00000315585 MAP1LC3BQ9GZQ8 125 aa12.46□□□□□ -0.41
CHFR-202ENST00000315585 UFSP2Q9NUQ7 469 aa12.46□□□□□ -0.41
CHFR-202ENST00000315585 JPT1Q9UK76 154 aa12.46□□□□□ -0.41
CHFR-202ENST00000315585 SLC25A15Q9Y619 301 aa12.46□□□□□ -0.41
CHFR-202ENST00000315585 UBE2L5PA0A1B0GUS4 154 aa12.46□□□□□ -0.42
CHFR-202ENST00000315585 RAMP3O60896 148 aa12.46□□□□□ -0.42
CHFR-202ENST00000315585 EIF3GO75821 320 aaKnown RBP eCLIP12.46□□□□□ -0.42
CHFR-202ENST00000315585 PTBP3O95758 552 aaKnown RBP12.46□□□□□ -0.42
CHFR-202ENST00000315585 RPS10P46783 165 aaKnown RBP12.46□□□□□ -0.42
CHFR-202ENST00000315585 FABP9Q0Z7S8 132 aa12.46□□□□□ -0.42
CHFR-202ENST00000315585 HAPLN4Q86UW8 402 aa12.46□□□□□ -0.42
CHFR-202ENST00000315585 LHX4Q969G2 390 aa12.46□□□□□ -0.42
CHFR-202ENST00000315585 SNX22Q96L94 193 aa12.46□□□□□ -0.42
CHFR-202ENST00000315585 YPEL4Q96NS1 127 aa12.46□□□□□ -0.42
CHFR-202ENST00000315585 CTDSP1Q9GZU7 261 aa12.46□□□□□ -0.42
CHFR-202ENST00000315585 PTPRZ1P23471 2315 aaPredicted RBP12.45□□□□□ -0.42
CHFR-202ENST00000315585 MGST3O14880 152 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 S1PR2O95136 353 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 IGHV2-5P01817 119 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 OR2B8PP59922 312 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 GNB2P62879 340 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 Q6ZR03 302 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 MSL2Q9HCI7 577 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 IGHV1-18A0A0C4DH31 117 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 CTXND1A0A1B0GTU2 59 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 CEBPZOSA8MTT3 80 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 CLDN34H7C241 214 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 ZNF737O75373 536 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 GPR12P47775 334 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 PSMB3P49720 205 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 TDGF1P3P51864 188 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 RPL30P62888 115 aaKnown RBP12.45□□□□□ -0.42
CHFR-202ENST00000315585 RBPJQ06330 500 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 CISD2Q8N5K1 135 aaKnown RBP12.45□□□□□ -0.42
CHFR-202ENST00000315585 ACTR3CQ9C0K3 210 aaPredicted RBP12.45□□□□□ -0.42
CHFR-202ENST00000315585 NCOR1P1Q9H4R4 102 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 ZNF665Q9H7R5 613 aa12.45□□□□□ -0.42
CHFR-202ENST00000315585 SRRM5B3KS81 715 aa12.44□□□□□ -0.42
CHFR-202ENST00000315585 YPEL1O60688 119 aa12.44□□□□□ -0.42
CHFR-202ENST00000315585 CYB5R3P00387 301 aaPredicted RBP12.44□□□□□ -0.42
CHFR-202ENST00000315585 HPRT1P00492 218 aa12.44□□□□□ -0.42
CHFR-202ENST00000315585 KIR2DS2P43631 304 aa12.44□□□□□ -0.42
CHFR-202ENST00000315585 ZNF474Q6S9Z5 364 aaPredicted RBP12.44□□□□□ -0.42
CHFR-202ENST00000315585 GFRALQ6UXV0 394 aa12.44□□□□□ -0.42
CHFR-202ENST00000315585 OR2Z1Q8NG97 314 aa12.44□□□□□ -0.42
CHFR-202ENST00000315585 YPEL2Q96QA6 119 aa12.44□□□□□ -0.42
CHFR-202ENST00000315585 ZNF251Q9BRH9 671 aa12.44□□□□□ -0.42
CHFR-202ENST00000315585 MANBALQ9NQG1 85 aa12.44□□□□□ -0.42
CHFR-202ENST00000315585 C17orf98A8MV24 154 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 RBFOX2O43251 390 aaKnown RBP eCLIP12.43□□□□□ -0.421e-11■■■□□ 15.8
CHFR-202ENST00000315585 SELENOVP59797 346 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 ELOBQ15370 118 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 CR1LQ2VPA4 569 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 FAM90A2PQ658T7 463 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 OR13A1Q8NGR1 328 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 OR6C3Q9NZP0 311 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 GNG12Q9UBI6 72 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 PSG11Q9UQ72 335 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 GTF3C1Q12789 2109 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 MARCH11A6NNE9 402 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 TMEM250H0YL14 139 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 CYB5BO43169 146 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 CRYAAP02489 173 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 ERVK-16P61578 105 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 VWC2Q2TAL6 325 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 Q8NA96 180 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 CA5BP1Q8WTZ4 195 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 AGMATQ9BSE5 352 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 URB1O60287 2271 aaKnown RBP12.43□□□□□ -0.42
CHFR-202ENST00000315585 DMXL1Q9Y485 3027 aa12.43□□□□□ -0.42
CHFR-202ENST00000315585 C15orf65H3BRN8 121 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 FBP1P09467 338 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 FGF7P21781 194 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 SSTR5P35346 364 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 RAB7AP51149 207 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 ELLP55199 621 aaPredicted RBP12.42□□□□□ -0.42
CHFR-202ENST00000315585 MEF2BQ02080 365 aaPredicted RBP12.42□□□□□ -0.42
CHFR-202ENST00000315585 ZNF726P1Q15940 193 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 Q3ZCU0 254 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 OR2B11Q5JQS5 317 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 C1orf87Q8N0U7 546 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 OR52E5Q8NH55 327 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 TMPRSS5Q9H3S3 457 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 VSIRQ9H7M9 311 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 ZNF727A8MUV8 499 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 ITGB1BP1O14713 200 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 MPDU1O75352 247 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 IGHV3-13P01766 116 aa12.42□□□□□ -0.42
CHFR-202ENST00000315585 OPN1MWP04001 364 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms