RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 RHBDL1O75783 438 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 FOLR3P41439 243 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 HBG1P69891 147 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 HBG2P69892 147 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 C17orf67Q0P5P2 114 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 IL15RAQ13261 267 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 LRRC10Q5BKY1 277 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 OR10V1Q8NGI7 309 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 OR52N5Q8NH56 324 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 OR4S2Q8NH73 311 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 C19orf25Q9UFG5 118 aaPredicted RBP10□□□□□ -0.81
LDLRAD3-201ENST00000315571 OR51B2Q9Y5P1 312 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 PXMP4Q9Y6I8 212 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 C11orf94C9JXX5 98 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 H3BUT2 72 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 ISLRO14498 428 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 C3orf79P0CE67 100 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 IGLV3-21P80748 117 aaPredicted RBP10□□□□□ -0.81
LDLRAD3-201ENST00000315571 TMEM95Q3KNT9 176 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 MRPL14Q6P1L8 145 aaKnown RBP10□□□□□ -0.81
LDLRAD3-201ENST00000315571 OR2V1Q8NHB1 315 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 CT55Q8WUE5 264 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 ADAT3Q96EY9 351 aaPredicted RBP10□□□□□ -0.81
LDLRAD3-201ENST00000315571 UHRF2Q96PU4 802 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 ZNF442Q9H7R0 627 aa10□□□□□ -0.81
LDLRAD3-201ENST00000315571 COL27A1Q8IZC6 1860 aaPredicted RBP10□□□□□ -0.81
LDLRAD3-201ENST00000315571 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 C7orf71A4D174 169 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 TRAPPC2LH3BP13 241 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 C1orf100Q5SVJ3 147 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 SLC25A34Q6PIV7 304 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 RALYQ9UKM9 306 aaKnown RBP9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 F2Z2F3 143 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 S1PR2O95136 353 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 NDUFB4O95168 129 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 FREM3P0C091 2139 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 RPS16P62249 146 aaKnown RBP9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 FMODQ06828 376 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 FAM166AQ6J272 317 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 PNKDQ8N490 385 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 ZNF581Q9P0T4 197 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 IGKV3D-11A0A0A0MRZ8 115 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 A0A1W2PPV4 95 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 C1QTNF9BB2RNN3 333 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 SIRPB1O00241 398 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 C1QTNF9P0C862 333 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 FCGR2AP12318 317 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 TCTAP57738 103 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 FOXF1Q12946 379 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 GEMIN7Q9H840 131 aaKnown RBP9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 SS18L2Q9UHA2 77 aa9.99□□□□□ -0.81
LDLRAD3-201ENST00000315571 URB1O60287 2271 aaKnown RBP9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 CD300LBA8K4G0 201 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 BMPR1BO00238 502 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 AESQ08117 197 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 LTC4SQ16873 150 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 PRICKLE4Q2TBC4 344 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 CEACAM21Q3KPI0 293 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 FAM69BQ5VUD6 431 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 DGAT2L6Q6ZPD8 337 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 CPT1CQ8TCG5 803 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 PIGTQ969N2 578 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 TSPAN32Q96QS1 320 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 NXF5Q9H1B4 397 aaKnown RBP9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 PIEZO1Q92508 2521 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 ZNF732B4DXR9 585 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 CLDN1O95832 211 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 GPX1P07203 203 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 SRIP30626 198 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 CEBPDP49716 269 aaPredicted RBP9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 ASPHD2Q6ICH7 369 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 FAM71F2Q6NXP2 309 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 MRPL54Q6P161 138 aaKnown RBP9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 OR10G4Q8NGN3 311 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 RNF133Q8WVZ7 376 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 IGHV3-20A0A0C4DH32 117 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 A0A1B0GW15 77 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 CT62P0C5K7 136 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 DAP3P51398 398 aaKnown RBP9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 CLDN17P56750 224 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 ANKRD37Q7Z713 158 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 ATG4DQ86TL0 474 aaPredicted RBP9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 TMEM251Q8N6I4 163 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 STPG3Q8N7X2 389 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 HOXB13Q92826 284 aaPredicted RBP9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 CYYR1Q96J86 154 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 SPRY4Q9C004 299 aa9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 C19orf53Q9UNZ5 99 aaPredicted RBP9.98□□□□□ -0.81
LDLRAD3-201ENST00000315571 PPIAL4CA0A0B4J2A2 164 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 IGLC7A0M8Q6 106 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 HSPB2A8KAH6 182 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 PPIAL4GP0DN37 164 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 CA7P43166 264 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 TMEM50BP56557 158 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 HSPB2Q16082 182 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 PRR22Q8IZ63 422 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 GATAD1Q8WUU5 269 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 TECRQ9NZ01 308 aaKnown RBP9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 SPEGQ15772 3267 aa9.97□□□□□ -0.81
LDLRAD3-201ENST00000315571 AHCTF1Q8WYP5 2266 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms