RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 FSHBP01225 129 aa14.71□□□□□ -0.05
HMGA1-201ENST00000311487 CD34P28906 385 aa14.71□□□□□ -0.05
HMGA1-201ENST00000311487 LGALSLQ3ZCW2 172 aaPredicted RBP14.71□□□□□ -0.05
HMGA1-201ENST00000311487 ODF3L1Q8IXM7 274 aa14.71□□□□□ -0.05
HMGA1-201ENST00000311487 TERB2Q8NHR7 220 aa14.71□□□□□ -0.05
HMGA1-201ENST00000311487 MARCH1Q8TCQ1 289 aa14.71□□□□□ -0.05
HMGA1-201ENST00000311487 OR2W1Q9Y3N9 320 aa14.71□□□□□ -0.05
HMGA1-201ENST00000311487 SAA2-SAA4A0A096LPE2 208 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 HSD17B6O14756 317 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 PPYP01298 95 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 HLA-AP01891 365 aaKnown RBP14.7□□□□□ -0.06
HMGA1-201ENST00000311487 CTXN2P0C2S0 81 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 SAA2P0DJI9 122 aaPredicted RBP14.7□□□□□ -0.06
HMGA1-201ENST00000311487 HTR1DP28221 377 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 PPP1R1AQ13522 171 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 LYG2Q86SG7 212 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 SLC7A5P1Q8MH63 180 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 ADAD2Q8NCV1 583 aaKnown RBP14.7□□□□□ -0.06
HMGA1-201ENST00000311487 ZNF596Q8TC21 504 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 OR5H14A6NHG9 310 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 TNFSF12O43508 249 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 SLC22A5O76082 557 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 HNF1AP20823 631 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 DHODHQ02127 395 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 DEFB112Q30KQ8 113 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 ZNF660Q6AZW8 331 aaPredicted RBP14.7□□□□□ -0.06
HMGA1-201ENST00000311487 LHFPL1Q86WI0 220 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 C5orf30Q96GV9 206 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 DUX5Q96PT3 197 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 FAM96BQ9Y3D0 163 aa14.7□□□□□ -0.06
HMGA1-201ENST00000311487 IGHV3-72A0A0B4J1Y9 119 aa14.69□□□□□ -0.06
HMGA1-201ENST00000311487 SRD5A1P18405 259 aa14.69□□□□□ -0.06
HMGA1-201ENST00000311487 PI3P19957 117 aa14.69□□□□□ -0.06
HMGA1-201ENST00000311487 LY6G6FQ5SQ64 297 aa14.69□□□□□ -0.06
HMGA1-201ENST00000311487 DHRS11Q6UWP2 260 aa14.69□□□□□ -0.06
HMGA1-201ENST00000311487 BEND2Q8NDZ0 799 aa14.69□□□□□ -0.06
HMGA1-201ENST00000311487 CCL28Q9NRJ3 127 aa14.69□□□□□ -0.06
HMGA1-201ENST00000311487 C9orf170A2RU37 121 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 PROP1O75360 226 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 GPR12P47775 334 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 LUMP51884 338 aaPredicted RBP14.68□□□□□ -0.06
HMGA1-201ENST00000311487 Q3ZCU0 254 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 C11orf88Q6PI97 169 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 ZNF48Q96MX3 618 aaPredicted RBP14.68□□□□□ -0.06
HMGA1-201ENST00000311487 DPM3Q9P2X0 92 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 GPR132Q9UNW8 380 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 PRELID1Q9Y255 219 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 TUSC2O75896 110 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 DIRAS3O95661 229 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 HERV-K104P61576 105 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 FBLN7Q53RD9 439 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 AADACL3Q5VUY0 350 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 EDARADDQ8WWZ3 215 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 RPEQ96AT9 228 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 CDC42EP3Q9UKI2 254 aa14.68□□□□□ -0.06
HMGA1-201ENST00000311487 SETD2Q9BYW2 2564 aaPredicted RBP14.68□□□□□ -0.06
HMGA1-201ENST00000311487 LEUTXA8MZ59 168 aa14.67□□□□□ -0.06
HMGA1-201ENST00000311487 LY6LH3BQJ8 138 aa14.67□□□□□ -0.06
HMGA1-201ENST00000311487 TSC22D2O75157 780 aa14.67□□□□□ -0.06
HMGA1-201ENST00000311487 IGLV2-14P01704 120 aa14.67□□□□□ -0.06
HMGA1-201ENST00000311487 AKR1C4P17516 323 aa14.67□□□□□ -0.06
HMGA1-201ENST00000311487 TAS2R31P59538 309 aa14.67□□□□□ -0.06
HMGA1-201ENST00000311487 TMEM30BQ3MIR4 351 aa14.67□□□□□ -0.06
HMGA1-201ENST00000311487 MIDNQ504T8 468 aa14.67□□□□□ -0.06
HMGA1-201ENST00000311487 TPTE2P1Q5T6R2 138 aa14.67□□□□□ -0.06
HMGA1-201ENST00000311487 MITD1Q8WV92 249 aa14.67□□□□□ -0.06
HMGA1-201ENST00000311487 ASB13Q8WXK3 278 aa14.67□□□□□ -0.06
HMGA1-201ENST00000311487 SLC5A7Q9GZV3 580 aa14.67□□□□□ -0.06
HMGA1-201ENST00000311487 FXYD6Q9H0Q3 95 aa14.67□□□□□ -0.06
HMGA1-201ENST00000311487 C5orf66Q9H5L9 145 aa14.67□□□□□ -0.06
HMGA1-201ENST00000311487 SDHAF2Q9NX18 166 aa14.67□□□□□ -0.06
HMGA1-201ENST00000311487 SRSF2Q01130 221 aaKnown RBP14.66□□□□□ -0.06
HMGA1-201ENST00000311487 ZNF818PQ6ZRF7 136 aa14.66□□□□□ -0.06
HMGA1-201ENST00000311487 OR5M8Q8NGP6 311 aa14.66□□□□□ -0.06
HMGA1-201ENST00000311487 TMEM230Q96A57 120 aa14.66□□□□□ -0.06
HMGA1-201ENST00000311487 ANKRD34BA5PLL1 514 aa14.66□□□□□ -0.06
HMGA1-201ENST00000311487 RAB29O14966 203 aa14.66□□□□□ -0.06
HMGA1-201ENST00000311487 MOB3BQ86TA1 216 aa14.66□□□□□ -0.06
HMGA1-201ENST00000311487 LINC00311Q8N616 119 aa14.66□□□□□ -0.06
HMGA1-201ENST00000311487 SIGLECL1Q8N7X8 197 aa14.66□□□□□ -0.06
HMGA1-201ENST00000311487 ST6GALNAC6Q969X2 333 aa14.66□□□□□ -0.06
HMGA1-201ENST00000311487 ZNF251Q9BRH9 671 aa14.66□□□□□ -0.06
HMGA1-201ENST00000311487 MRPL20Q9BYC9 149 aaKnown RBP14.66□□□□□ -0.06
HMGA1-201ENST00000311487 TOLLIPQ9H0E2 274 aa14.66□□□□□ -0.06
HMGA1-201ENST00000311487 TMEM160Q9NX00 188 aa14.66□□□□□ -0.06
HMGA1-201ENST00000311487 M0R1X1 148 aa14.65□□□□□ -0.06
HMGA1-201ENST00000311487 VAMP1P23763 118 aa14.65□□□□□ -0.06
HMGA1-201ENST00000311487 GNRHRP30968 328 aa14.65□□□□□ -0.06
HMGA1-201ENST00000311487 RAB7AP51149 207 aa14.65□□□□□ -0.06
HMGA1-201ENST00000311487 PHLDA2Q53GA4 152 aa14.65□□□□□ -0.06
HMGA1-201ENST00000311487 LIN54Q6MZP7 749 aa14.65□□□□□ -0.06
HMGA1-201ENST00000311487 ZNF767PQ75MW2 155 aa14.65□□□□□ -0.06
HMGA1-201ENST00000311487 DRAM1Q8N682 238 aa14.65□□□□□ -0.06
HMGA1-201ENST00000311487 RTN4IP1Q8WWV3 396 aaPredicted RBP14.65□□□□□ -0.06
HMGA1-201ENST00000311487 MOB3AQ96BX8 217 aa14.65□□□□□ -0.06
HMGA1-201ENST00000311487 JMJD1CQ15652 2540 aa14.65□□□□□ -0.06
HMGA1-201ENST00000311487 DUS4LO95620 317 aaKnown RBP14.64□□□□□ -0.07
HMGA1-201ENST00000311487 PGAM2P15259 253 aa14.64□□□□□ -0.07
HMGA1-201ENST00000311487 HLA-GP17693 338 aa14.64□□□□□ -0.07
HMGA1-201ENST00000311487 CXCL2P19875 107 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms