RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 BHLHA15Q7RTS1 189 aaPredicted RBP12.68□□□□□ -0.38
SPIRE1-201ENST00000309836 H2BFWTQ7Z2G1 175 aa12.68□□□□□ -0.38
SPIRE1-201ENST00000309836 LHX4Q969G2 390 aa12.68□□□□□ -0.38
SPIRE1-201ENST00000309836 ZNF251Q9BRH9 671 aa12.68□□□□□ -0.38
SPIRE1-201ENST00000309836 TCEAL7Q9BRU2 100 aa12.68□□□□□ -0.38
SPIRE1-201ENST00000309836 AGMATQ9BSE5 352 aa12.68□□□□□ -0.38
SPIRE1-201ENST00000309836 SLC39A9Q9NUM3 307 aa12.68□□□□□ -0.38
SPIRE1-201ENST00000309836 DKK4Q9UBT3 224 aa12.68□□□□□ -0.38
SPIRE1-201ENST00000309836 IFITM10A6NMD0 228 aa12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 ZNF737O75373 536 aa12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 CYB5R3P00387 301 aaPredicted RBP12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 IFNA1P01562 189 aa12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 HOXA5P20719 270 aa12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 PRDX2P32119 198 aa12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 RND2P52198 227 aa12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 CD81P60033 236 aa12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 PAX5Q02548 391 aa12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 PNRC1Q12796 327 aaPredicted RBP12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 EDDM3AQ14507 147 aa12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 WDR25Q64LD2 544 aaPredicted RBP12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 HSD17B10Q99714 261 aaKnown RBP12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 SSX3Q99909 188 aa12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 TMPRSS5Q9H3S3 457 aa12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 SLC25A22Q9H936 323 aa12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 PARD6AQ9NPB6 346 aa12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 PROCRQ9UNN8 238 aa12.67□□□□□ -0.38
SPIRE1-201ENST00000309836 CACNA1GO43497 2377 aa12.66□□□□□ -0.38
SPIRE1-201ENST00000309836 IGKV1D-17A0A075B6S4 117 aa12.66□□□□□ -0.38
SPIRE1-201ENST00000309836 HMGB3O15347 200 aaKnown RBP12.66□□□□□ -0.38
SPIRE1-201ENST00000309836 SPINT2O43291 252 aa12.66□□□□□ -0.38
SPIRE1-201ENST00000309836 YIF1AO95070 293 aa12.66□□□□□ -0.38
SPIRE1-201ENST00000309836 HTD2P86397 168 aa12.66□□□□□ -0.38
SPIRE1-201ENST00000309836 LTC4SQ16873 150 aa12.66□□□□□ -0.38
SPIRE1-201ENST00000309836 VWC2Q2TAL6 325 aa12.66□□□□□ -0.38
SPIRE1-201ENST00000309836 NCR3LG1Q68D85 454 aa12.66□□□□□ -0.38
SPIRE1-201ENST00000309836 SEM1Q6ZVN7 128 aa12.66□□□□□ -0.38
SPIRE1-201ENST00000309836 LRP11Q86VZ4 500 aa12.66□□□□□ -0.38
SPIRE1-201ENST00000309836 SLC25A15Q9Y619 301 aa12.66□□□□□ -0.38
SPIRE1-201ENST00000309836 USF3Q68DE3 2245 aa12.66□□□□□ -0.38
SPIRE1-201ENST00000309836 DIDO1Q9BTC0 2240 aaKnown RBP12.66□□□□□ -0.38
SPIRE1-201ENST00000309836 CYB5BO43169 146 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 PROP1O75360 226 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 OR9G9P0C7N8 305 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 MDKP21741 143 aaPredicted RBP12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 SPRNQ5BIV9 151 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 FFAR4Q5NUL3 377 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 OR2Z1Q8NG97 314 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 GATAD1Q8WUU5 269 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 QTRT1Q9BXR0 403 aaKnown RBP12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 CTXND1A0A1B0GTU2 59 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 C15orf62A8K5M9 175 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 AHRRA9YTQ3 701 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 ADH4P08319 380 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 NDUFA6P56556 154 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 DEFB109BQ30KR1 87 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 TRAT1Q6PIZ9 186 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 OR10P1Q8NGE3 313 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 OR10G9Q8NGN4 311 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 OR10G7Q8NGN6 311 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 R3HDM4Q96D70 268 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 CIB3Q96Q77 187 aaPredicted RBP12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 NIT2Q9NQR4 276 aa12.65□□□□□ -0.38
SPIRE1-201ENST00000309836 IGHV3OR15-7A0A075B7D8 119 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 MARCH11A6NNE9 402 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 SRRM5B3KS81 715 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 HIST1H2BKO60814 126 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 HIST1H2BJP06899 126 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 HIST1H2BOP23527 126 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 DUTP33316 252 aaKnown RBP12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 HIST1H2BBP33778 126 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 HIST1H2BDP58876 126 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 HIST1H2BCP62807 126 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 MEF2BQ02080 365 aaPredicted RBP12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 TLE1Q04724 770 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 P2RY6Q15077 328 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 HIST2H2BEQ16778 126 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 SPNS3Q6ZMD2 512 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 FAM90A1Q86YD7 464 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 Q8TCH9 128 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 HIST1H2BHQ93079 126 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 PLPPR2Q96GM1 343 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 HIST1H2BNQ99877 126 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 HIST1H2BMQ99879 126 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 NPCDR1Q9BY65 106 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 GSN-AS1Q9NRJ2 163 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 TMEM242Q9NWH2 141 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 DOK5Q9P104 306 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 LAMP3Q9UQV4 416 aa12.64□□□□□ -0.39
SPIRE1-201ENST00000309836 CLDN34H7C241 214 aa12.63□□□□□ -0.39
SPIRE1-201ENST00000309836 TRGC2P03986 189 aa12.63□□□□□ -0.39
SPIRE1-201ENST00000309836 FABP1P07148 127 aa12.63□□□□□ -0.39
SPIRE1-201ENST00000309836 GPR12P47775 334 aa12.63□□□□□ -0.39
SPIRE1-201ENST00000309836 GNB2P62879 340 aa12.63□□□□□ -0.39
SPIRE1-201ENST00000309836 C1orf87Q8N0U7 546 aa12.63□□□□□ -0.39
SPIRE1-201ENST00000309836 FAM210BQ96KR6 192 aa12.63□□□□□ -0.39
SPIRE1-201ENST00000309836 WASF3Q9UPY6 502 aa12.63□□□□□ -0.39
SPIRE1-201ENST00000309836 LINC00587B1AMM8 73 aa12.63□□□□□ -0.39
SPIRE1-201ENST00000309836 RBMXL2O75526 392 aaKnown RBP12.63□□□□□ -0.39
SPIRE1-201ENST00000309836 MBP02144 154 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms