RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CDC34P49427 236 aaPredicted RBP10.79□□□□□ -0.68
RETREG3-201ENST00000309428 SRSF4Q08170 494 aaKnown RBP10.79□□□□□ -0.68
RETREG3-201ENST00000309428 TMEM183AQ8IXX5 376 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 OR4A16Q8NH70 328 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 CTDSP1Q9GZU7 261 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 OR2D2Q9H210 308 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 DUXBA0A1W2PPF3 345 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 MT-CO3P00414 261 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 CBLN1P23435 193 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 OR3A1P47881 315 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 SOX8P57073 446 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 TCTAP57738 103 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 LINC00205P59089 165 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 TPPP2P59282 170 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 NAGKQ9UJ70 344 aa10.79□□□□□ -0.68
RETREG3-201ENST00000309428 LOC102723971A0A1B0GUV8 181 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 SIAH2O43255 324 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 RPLP1P05386 114 aaKnown RBP10.78□□□□□ -0.68
RETREG3-201ENST00000309428 CTXN2P0C2S0 81 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 GGNQ86UU5 652 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 MSI2Q96DH6 328 aaKnown RBP10.78□□□□□ -0.68
RETREG3-201ENST00000309428 WDR54Q9H977 334 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 C1QTNF9BB2RNN3 333 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 B4DEV8 164 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 SYNGR3O43761 229 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 ZNF506Q5JVG8 444 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 C10orf91Q5T1B1 145 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 TMEM9BQ9NQ34 198 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 NOTCH3Q9UM47 2321 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 SLC22A20A6NK97 555 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 PGLYRP1O75594 196 aaPredicted RBP10.78□□□□□ -0.68
RETREG3-201ENST00000309428 RAB4AP20338 218 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 DEFB109BQ30KR1 87 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 RAB24Q969Q5 203 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 AP1S3Q96PC3 154 aa10.78□□□□□ -0.68
RETREG3-201ENST00000309428 LIN7CQ9NUP9 197 aaKnown RBP10.78□□□□□ -0.68
RETREG3-201ENST00000309428 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.78□□□□□ -0.683e-8■■■■□ 20.4
RETREG3-201ENST00000309428 TOX4O94842 621 aa10.77□□□□□ -0.68
RETREG3-201ENST00000309428 CEACAM1P13688 526 aa10.77□□□□□ -0.68
RETREG3-201ENST00000309428 SSPNQ14714 243 aa10.77□□□□□ -0.68
RETREG3-201ENST00000309428 MDP1Q86V88 176 aa10.77□□□□□ -0.68
RETREG3-201ENST00000309428 MRGPRDQ8TDS7 321 aa10.77□□□□□ -0.68
RETREG3-201ENST00000309428 TPPP3Q9BW30 176 aa10.77□□□□□ -0.68
RETREG3-201ENST00000309428 YLPM1P49750 1951 aaKnown RBP10.77□□□□□ -0.69
RETREG3-201ENST00000309428 SNURFLB1AK76 121 aa10.77□□□□□ -0.69
RETREG3-201ENST00000309428 WNT9BO14905 357 aa10.77□□□□□ -0.69
RETREG3-201ENST00000309428 SELLP14151 372 aa10.77□□□□□ -0.69
RETREG3-201ENST00000309428 HINT1P49773 126 aaPredicted RBP10.77□□□□□ -0.69
RETREG3-201ENST00000309428 KDF1Q8NAX2 398 aaPredicted RBP10.77□□□□□ -0.69
RETREG3-201ENST00000309428 TNCP24821 2201 aa10.77□□□□□ -0.69
RETREG3-201ENST00000309428 ZNF716A6NP11 495 aa10.77□□□□□ -0.69
RETREG3-201ENST00000309428 ZNF253O75346 499 aa10.77□□□□□ -0.69
RETREG3-201ENST00000309428 CD46P15529 392 aa10.77□□□□□ -0.69
RETREG3-201ENST00000309428 CAMPP49913 170 aa10.77□□□□□ -0.69
RETREG3-201ENST00000309428 SPCS3P61009 180 aa10.77□□□□□ -0.69
RETREG3-201ENST00000309428 FOXO1Q12778 655 aa10.77□□□□□ -0.69
RETREG3-201ENST00000309428 RAB31Q13636 194 aa10.77□□□□□ -0.69
RETREG3-201ENST00000309428 FAM173AQ9BQD7 235 aa10.77□□□□□ -0.69
RETREG3-201ENST00000309428 NDUFAF3Q9BU61 184 aa10.77□□□□□ -0.69
RETREG3-201ENST00000309428 PSG11Q9UQ72 335 aa10.77□□□□□ -0.69
RETREG3-201ENST00000309428 ARL2-SNX15V9GYD0 113 aa10.77□□□□□ -0.69
RETREG3-201ENST00000309428 C20orf202A1L168 122 aa10.76□□□□□ -0.69
RETREG3-201ENST00000309428 APOA2P02652 100 aa10.76□□□□□ -0.69
RETREG3-201ENST00000309428 TMEM183BQ1AE95 376 aa10.76□□□□□ -0.69
RETREG3-201ENST00000309428 NOL4LQ96MY1 436 aaPredicted RBP10.76□□□□□ -0.69
RETREG3-201ENST00000309428 CIB3Q96Q77 187 aaPredicted RBP10.76□□□□□ -0.69
RETREG3-201ENST00000309428 HRASP01112 189 aa10.76□□□□□ -0.69
RETREG3-201ENST00000309428 UCP3P55916 312 aa10.76□□□□□ -0.69
RETREG3-201ENST00000309428 TMEM256Q8N2U0 113 aa10.76□□□□□ -0.69
RETREG3-201ENST00000309428 TAF15Q92804 592 aaKnown RBP eCLIP10.76□□□□□ -0.69
RETREG3-201ENST00000309428 PRDM13Q9H4Q3 707 aa10.76□□□□□ -0.69
RETREG3-201ENST00000309428 SLC17A3O00476 420 aa10.76□□□□□ -0.69
RETREG3-201ENST00000309428 FCGR3BO75015 233 aa10.76□□□□□ -0.69
RETREG3-201ENST00000309428 HSBP1O75506 76 aa10.76□□□□□ -0.69
RETREG3-201ENST00000309428 TMEM211Q6ICI0 200 aa10.76□□□□□ -0.69
RETREG3-201ENST00000309428 STARD4Q96DR4 205 aa10.76□□□□□ -0.69
RETREG3-201ENST00000309428 OR2W1Q9Y3N9 320 aa10.76□□□□□ -0.69
RETREG3-201ENST00000309428 PPIAL4AQ9Y536 164 aa10.76□□□□□ -0.69
RETREG3-201ENST00000309428 PLXNB1O43157 2135 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 A0A0U1RQV5 110 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 TIMM8AO60220 97 aaPredicted RBP10.75□□□□□ -0.69
RETREG3-201ENST00000309428 NEURL1O76050 574 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 OTX1P32242 354 aaPredicted RBP10.75□□□□□ -0.69
RETREG3-201ENST00000309428 SPSB3Q6PJ21 355 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 OR5AU1Q8NGC0 362 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 TMEM54Q969K7 222 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 SDF2L1Q9HCN8 221 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 MANBALQ9NQG1 85 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 CREBBPQ92793 2442 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 TRGV5A0A0B4J1U4 118 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 TMEM50AO95807 157 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 GZMBP10144 247 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 OR10J1P30954 320 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 ZFP36L1Q07352 338 aaKnown RBP10.75□□□□□ -0.69
RETREG3-201ENST00000309428 MRPL49Q13405 166 aaKnown RBP10.75□□□□□ -0.69
RETREG3-201ENST00000309428 OR4C5Q8NGB2 326 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 KCNE4Q8WWG9 221 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 DCTN5Q9BTE1 182 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 SRD5A3Q9H8P0 318 aa10.75□□□□□ -0.69
RETREG3-201ENST00000309428 A0A1B0GU03 582 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms