RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 TIMM50Q3ZCQ8 353 aa15.4■□□□□ 0.06
PDZRN3-202ENST00000308537 H1FOOQ8IZA3 346 aaPredicted RBP15.4■□□□□ 0.06
PDZRN3-202ENST00000308537 UBE2E2Q96LR5 201 aa15.4■□□□□ 0.06
PDZRN3-202ENST00000308537 ATG5Q9H1Y0 275 aa15.4■□□□□ 0.06
PDZRN3-202ENST00000308537 ZNF221Q9UK13 617 aa15.4■□□□□ 0.06
PDZRN3-202ENST00000308537 H7C2Y5 167 aa15.39■□□□□ 0.05
PDZRN3-202ENST00000308537 CRYGBP07316 175 aa15.39■□□□□ 0.05
PDZRN3-202ENST00000308537 RAB9AP51151 201 aa15.39■□□□□ 0.05
PDZRN3-202ENST00000308537 MRGPRG-AS1Q2M3A8 158 aa15.39■□□□□ 0.05
PDZRN3-202ENST00000308537 ZNF260Q3ZCT1 412 aa15.39■□□□□ 0.05
PDZRN3-202ENST00000308537 PDPNQ86YL7 162 aa15.39■□□□□ 0.05
PDZRN3-202ENST00000308537 LGALS14Q8TCE9 139 aa15.39■□□□□ 0.05
PDZRN3-202ENST00000308537 OR2D2Q9H210 308 aa15.39■□□□□ 0.05
PDZRN3-202ENST00000308537 DAPK2Q9UIK4 370 aa15.39■□□□□ 0.05
PDZRN3-202ENST00000308537 M0R1X1 148 aa15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 ARPC1BO15143 372 aaKnown RBP15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 SSX5O60225 188 aa15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 SPDEFO95238 335 aa15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 GSTP1P09211 210 aaKnown RBP15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 CD36P16671 472 aa15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 DTYMKP23919 212 aa15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 GNB1P62873 340 aa15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 CDNFQ49AH0 187 aa15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 HACD4Q5VWC8 232 aa15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 OR5H6Q8NGV6 325 aa15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 OR10J5Q8NHC4 309 aa15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 DDB2Q92466 427 aa15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 SLC25A38Q96DW6 304 aa15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 FAM103A1Q9BTL3 118 aaKnown RBP15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 CENPOQ9BU64 300 aa15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 MCRIP2Q9BUT9 160 aaKnown RBP15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 METTL1Q9UBP6 276 aaKnown RBP15.38■□□□□ 0.05
PDZRN3-202ENST00000308537 SORL1Q92673 2214 aa15.37■□□□□ 0.05
PDZRN3-202ENST00000308537 CA2P00918 260 aa15.37■□□□□ 0.05
PDZRN3-202ENST00000308537 LUMP51884 338 aaPredicted RBP15.37■□□□□ 0.05
PDZRN3-202ENST00000308537 MRPS15P82914 257 aaKnown RBP15.37■□□□□ 0.05
PDZRN3-202ENST00000308537 ARFRP1Q13795 201 aa15.37■□□□□ 0.05
PDZRN3-202ENST00000308537 ECSCRQ19T08 205 aa15.37■□□□□ 0.05
PDZRN3-202ENST00000308537 ZNF562Q6V9R5 426 aa15.37■□□□□ 0.05
PDZRN3-202ENST00000308537 OR11H1Q8NG94 326 aa15.37■□□□□ 0.05
PDZRN3-202ENST00000308537 CASTOR1Q8WTX7 329 aa15.37■□□□□ 0.05
PDZRN3-202ENST00000308537 NUDCD2Q8WVJ2 157 aa15.37■□□□□ 0.05
PDZRN3-202ENST00000308537 SCOCQ9UIL1 159 aa15.37■□□□□ 0.05
PDZRN3-202ENST00000308537 TMEM235A6NFC5 223 aa15.36■□□□□ 0.05
PDZRN3-202ENST00000308537 SRRM4A7MD48 611 aaKnown RBP15.36■□□□□ 0.05
PDZRN3-202ENST00000308537 IGLV2-14P01704 120 aa15.36■□□□□ 0.05
PDZRN3-202ENST00000308537 TSNAXQ99598 290 aaKnown RBP15.36■□□□□ 0.05
PDZRN3-202ENST00000308537 GPR61Q9BZJ8 451 aa15.36■□□□□ 0.05
PDZRN3-202ENST00000308537 SLC35D1Q9NTN3 355 aa15.36■□□□□ 0.05
PDZRN3-202ENST00000308537 FOXA2Q9Y261 457 aaPredicted RBP15.36■□□□□ 0.05
PDZRN3-202ENST00000308537 VSIG4Q9Y279 399 aa15.36■□□□□ 0.05
PDZRN3-202ENST00000308537 LOC100506127A0A0U1RQW1 187 aa15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 A0A1W2PN81 502 aa15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 LINC00473A8K010 186 aa15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 SLC25A17O43808 307 aa15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 DUTP33316 252 aaKnown RBP15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 CHRNA7P36544 502 aa15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 RPS16P62249 146 aaKnown RBP15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 MXD1Q05195 221 aa15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 PJVKQ0ZLH3 352 aa15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 ARL6IP1Q15041 203 aa15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 AKIRIN2Q53H80 203 aa15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 TMEM177Q53S58 311 aa15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 TCTEX1D1Q8N7M0 179 aa15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 FLYWCH2Q96CP2 140 aaKnown RBP15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 CLCC1Q96S66 551 aa15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 ALX4Q9H161 411 aaPredicted RBP15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 RHBDL2Q9NX52 303 aa15.35■□□□□ 0.05
PDZRN3-202ENST00000308537 APOA2P02652 100 aa15.34■□□□□ 0.05
PDZRN3-202ENST00000308537 TGFBR1P36897 503 aa15.34■□□□□ 0.05
PDZRN3-202ENST00000308537 SCAND1P57086 179 aa15.34■□□□□ 0.05
PDZRN3-202ENST00000308537 PLGLAQ15195 96 aa15.34■□□□□ 0.05
PDZRN3-202ENST00000308537 PPP1R27Q86WC6 154 aa15.34■□□□□ 0.05
PDZRN3-202ENST00000308537 LFNGQ8NES3 379 aa15.34■□□□□ 0.05
PDZRN3-202ENST00000308537 OR5M8Q8NGP6 311 aa15.34■□□□□ 0.05
PDZRN3-202ENST00000308537 OR5B12Q96R08 314 aa15.34■□□□□ 0.05
PDZRN3-202ENST00000308537 DCSTAMPQ9H295 470 aa15.34■□□□□ 0.05
PDZRN3-202ENST00000308537 A3GALT2U3KPV4 340 aa15.34■□□□□ 0.05
PDZRN3-202ENST00000308537 TMEM127O75204 238 aa15.33■□□□□ 0.04
PDZRN3-202ENST00000308537 TALDO1P37837 337 aa15.33■□□□□ 0.04
PDZRN3-202ENST00000308537 RAB25P57735 213 aa15.33■□□□□ 0.04
PDZRN3-202ENST00000308537 TMEM65Q6PI78 240 aa15.33■□□□□ 0.04
PDZRN3-202ENST00000308537 BVESQ8NE79 360 aa15.33■□□□□ 0.04
PDZRN3-202ENST00000308537 IGKV1D-13A0A0B4J2D9 117 aa15.32■□□□□ 0.04
PDZRN3-202ENST00000308537 SCGNO76038 276 aa15.32■□□□□ 0.04
PDZRN3-202ENST00000308537 HLA-DQB1P01920 261 aa15.32■□□□□ 0.04
PDZRN3-202ENST00000308537 IGKV1-13P0DP09 117 aa15.32■□□□□ 0.04
PDZRN3-202ENST00000308537 LGALS7P47929 136 aa15.32■□□□□ 0.04
PDZRN3-202ENST00000308537 ZNF616Q08AN1 781 aa15.32■□□□□ 0.04
PDZRN3-202ENST00000308537 EIF4EBP1Q13541 118 aaPredicted RBP15.32■□□□□ 0.04
PDZRN3-202ENST00000308537 ACTBL2Q562R1 376 aa15.32■□□□□ 0.04
PDZRN3-202ENST00000308537 UNQ5815/PRO19632Q6UWF5 114 aa15.32■□□□□ 0.04
PDZRN3-202ENST00000308537 OR1N2Q8NGR9 330 aa15.32■□□□□ 0.04
PDZRN3-202ENST00000308537 ARPC1AQ92747 370 aa15.32■□□□□ 0.04
PDZRN3-202ENST00000308537 GINS4Q9BRT9 223 aa15.32■□□□□ 0.04
PDZRN3-202ENST00000308537 ST6GALNAC5Q9BVH7 336 aa15.32■□□□□ 0.04
PDZRN3-202ENST00000308537 ETV7Q9Y603 341 aa15.32■□□□□ 0.04
PDZRN3-202ENST00000308537 TUSC2O75896 110 aa15.31■□□□□ 0.04
PDZRN3-202ENST00000308537 NFYAP23511 347 aaPredicted RBP15.31■□□□□ 0.04
PDZRN3-202ENST00000308537 FXYD3Q14802 87 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms