RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 FABP2P12104 132 aa11.03□□□□□ -0.64
COL3A1-201ENST00000304636 CYP2G1PQ6ZSU1 146 aa11.03□□□□□ -0.64
COL3A1-201ENST00000304636 IGHV3OR15-7A0A075B7D8 119 aa11.03□□□□□ -0.64
COL3A1-201ENST00000304636 FOXL2P58012 376 aa11.03□□□□□ -0.64
COL3A1-201ENST00000304636 GCSAMQ8N6F7 178 aa11.03□□□□□ -0.64
COL3A1-201ENST00000304636 FAM222BQ8WU58 562 aa11.03□□□□□ -0.64
COL3A1-201ENST00000304636 LINC00869P0C866 280 aa11.03□□□□□ -0.64
COL3A1-201ENST00000304636 WFIKKN1Q96NZ8 548 aa11.03□□□□□ -0.64
COL3A1-201ENST00000304636 CLEC1BQ9P126 229 aa11.03□□□□□ -0.64
COL3A1-201ENST00000304636 ZNF638Q14966 1978 aaKnown RBP11.03□□□□□ -0.64
COL3A1-201ENST00000304636 IGHV1-45A0A0A0MS14 117 aa11.03□□□□□ -0.64
COL3A1-201ENST00000304636 K7N7A8 449 aa11.03□□□□□ -0.64
COL3A1-201ENST00000304636 UBE2CO00762 179 aa11.03□□□□□ -0.64
COL3A1-201ENST00000304636 GOSR1O95249 250 aa11.03□□□□□ -0.64
COL3A1-201ENST00000304636 TMEM140Q9NV12 185 aa11.03□□□□□ -0.64
COL3A1-201ENST00000304636 A0A1W2PPE3 182 aa11.02□□□□□ -0.64
COL3A1-201ENST00000304636 KLF7O75840 302 aaPredicted RBP11.02□□□□□ -0.64
COL3A1-201ENST00000304636 UCP2P55851 309 aa11.02□□□□□ -0.64
COL3A1-201ENST00000304636 KCNMB1Q16558 191 aa11.02□□□□□ -0.64
COL3A1-201ENST00000304636 TPRX1Q8N7U7 411 aa11.02□□□□□ -0.64
COL3A1-201ENST00000304636 INSIG2Q9Y5U4 225 aa11.02□□□□□ -0.64
COL3A1-201ENST00000304636 NRXN2Q9P2S2 1712 aa11.02□□□□□ -0.64
COL3A1-201ENST00000304636 MARCH11A6NNE9 402 aa11.02□□□□□ -0.65
COL3A1-201ENST00000304636 IGKV3-11P04433 115 aa11.02□□□□□ -0.65
COL3A1-201ENST00000304636 TMEM54Q969K7 222 aa11.02□□□□□ -0.65
COL3A1-201ENST00000304636 C19orf24Q9BVV8 132 aa11.02□□□□□ -0.65
COL3A1-201ENST00000304636 TTTY12Q9BZ98 90 aa11.02□□□□□ -0.65
COL3A1-201ENST00000304636 AP5S1Q9NUS5 200 aa11.02□□□□□ -0.65
COL3A1-201ENST00000304636 CLEC5AQ9NY25 188 aa11.02□□□□□ -0.65
COL3A1-201ENST00000304636 DLL1O00548 723 aa11.02□□□□□ -0.65
COL3A1-201ENST00000304636 COX5BP10606 129 aa11.02□□□□□ -0.65
COL3A1-201ENST00000304636 SFXN3Q9BWM7 321 aa11.02□□□□□ -0.65
COL3A1-201ENST00000304636 GAS1P54826 345 aa11.02□□□□□ -0.65
COL3A1-201ENST00000304636 PLP1P60201 277 aa11.02□□□□□ -0.65
COL3A1-201ENST00000304636 SRSF3P84103 164 aaKnown RBP11.02□□□□□ -0.65
COL3A1-201ENST00000304636 CLDND2Q8NHS1 167 aa11.02□□□□□ -0.65
COL3A1-201ENST00000304636 DUSP15Q9H1R2 295 aaPredicted RBP11.02□□□□□ -0.65
COL3A1-201ENST00000304636 LOC389332A0A1B0GUA5 103 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 OR4C46A6NHA9 309 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 FXYD3Q14802 87 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 LRRC75BQ2VPJ9 315 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 ZNF658BQ4V348 819 aaPredicted RBP11.01□□□□□ -0.65
COL3A1-201ENST00000304636 WDYHV1Q96HA8 205 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 PPIHO43447 177 aaKnown RBP11.01□□□□□ -0.65
COL3A1-201ENST00000304636 CTSBP07858 339 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 C8orf88P0DMB2 117 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 MPZP25189 248 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 MPV17P39210 176 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 LGALS7P47929 136 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 RND1Q92730 232 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 S1PR2O95136 353 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 UQCRFS1P47985 274 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 NPBWR2P48146 333 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 CTAG1AP78358 180 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 C1QL2Q7Z5L3 287 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 OR8B3Q8NGG8 313 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 R4GN57 208 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 PARP14Q460N5 1801 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 CRYBB3P26998 211 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 HSPE1P61604 102 aaKnown RBP11.01□□□□□ -0.65
COL3A1-201ENST00000304636 SDF2L1Q9HCN8 221 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 PLSCR2Q9NRY7 297 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 COA4Q9NYJ1 87 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 SPAG17Q6Q759 2223 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 TMSB15BA0A087X1C1 80 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 HLA-DRB1P01911 266 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 MAS1LP35410 378 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 KIR2DL2P43627 348 aaPredicted RBP11.01□□□□□ -0.65
COL3A1-201ENST00000304636 HOXA4Q00056 320 aaPredicted RBP11.01□□□□□ -0.65
COL3A1-201ENST00000304636 IZUMO4Q1ZYL8 232 aa11.01□□□□□ -0.65
COL3A1-201ENST00000304636 TMEM189A5PLL7 270 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 ZNF735P0CB33 412 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 BTF3P20290 206 aaKnown RBP11□□□□□ -0.65
COL3A1-201ENST00000304636 NUBP1P53384 320 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 HERPUD1Q15011 391 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 SCNM1Q9BWG6 230 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 AICDAQ9GZX7 198 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 WNT5BQ9H1J7 359 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 FSCN3Q9NQT6 498 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 RALYQ9UKM9 306 aaKnown RBP11□□□□□ -0.65
COL3A1-201ENST00000304636 RAMP1O60894 148 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 UCP1P25874 307 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 ZCCHC14Q8WYQ9 949 aaKnown RBP11□□□□□ -0.65
COL3A1-201ENST00000304636 PMCHL2Q9BQD1 86 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 ZNF430Q9H8G1 570 aaPredicted RBP11□□□□□ -0.65
COL3A1-201ENST00000304636 PGPA6NDG6 321 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 KIAA1644Q3SXP7 199 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 HES3Q5TGS1 186 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 DNAJC4Q9NNZ3 241 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 FBLN5Q9UBX5 448 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 DPRXA6NFQ7 191 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 FAM157AC9JC47 383 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 CD40P25942 277 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 CEBPDP49716 269 aaPredicted RBP11□□□□□ -0.65
COL3A1-201ENST00000304636 DCAF10Q5QP82 559 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 ZNF788Q6ZQV5 615 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 DRAM1Q8N682 238 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 OR5R1Q8NH85 324 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 RAB1CQ92928 201 aa11□□□□□ -0.65
COL3A1-201ENST00000304636 TBX6O95947 436 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms