RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 B4DEV8 164 aa11.87□□□□□ -0.51
RAB40A-201ENST00000304236 WNT9BO14905 357 aa11.87□□□□□ -0.51
RAB40A-201ENST00000304236 CLDN1O95832 211 aa11.87□□□□□ -0.51
RAB40A-201ENST00000304236 ARG1P05089 322 aa11.87□□□□□ -0.51
RAB40A-201ENST00000304236 P0C879 139 aa11.87□□□□□ -0.51
RAB40A-201ENST00000304236 TAGLN2P37802 199 aaKnown RBP11.87□□□□□ -0.51
RAB40A-201ENST00000304236 GABRA2P47869 451 aa11.87□□□□□ -0.51
RAB40A-201ENST00000304236 SNRPEP62304 92 aaKnown RBP11.87□□□□□ -0.51
RAB40A-201ENST00000304236 SLC38A11Q08AI6 406 aa11.87□□□□□ -0.51
RAB40A-201ENST00000304236 TMEM41BQ5BJD5 291 aa11.87□□□□□ -0.51
RAB40A-201ENST00000304236 ZNF787Q6DD87 383 aa11.87□□□□□ -0.51
RAB40A-201ENST00000304236 CYB561D1Q8N8Q1 229 aa11.87□□□□□ -0.51
RAB40A-201ENST00000304236 OR52L2PQ8NGH6 319 aa11.87□□□□□ -0.51
RAB40A-201ENST00000304236 RAB39BQ96DA2 213 aa11.87□□□□□ -0.51
RAB40A-201ENST00000304236 COQ2Q96H96 371 aa11.87□□□□□ -0.51
RAB40A-201ENST00000304236 RSG1Q9BU20 258 aa11.87□□□□□ -0.51
RAB40A-201ENST00000304236 RBKSQ9H477 322 aa11.87□□□□□ -0.51
RAB40A-201ENST00000304236 HIVEP3Q5T1R4 2406 aa11.86□□□□□ -0.51
RAB40A-201ENST00000304236 UBE2CO00762 179 aa11.86□□□□□ -0.51
RAB40A-201ENST00000304236 RAB29O14966 203 aa11.86□□□□□ -0.51
RAB40A-201ENST00000304236 IFNA1P01562 189 aa11.86□□□□□ -0.51
RAB40A-201ENST00000304236 S100A8P05109 93 aa11.86□□□□□ -0.51
RAB40A-201ENST00000304236 MEOX2P50222 304 aa11.86□□□□□ -0.51
RAB40A-201ENST00000304236 PMS2P11Q13670 270 aa11.86□□□□□ -0.51
RAB40A-201ENST00000304236 PRAMEF6Q5VXH4 476 aa11.86□□□□□ -0.51
RAB40A-201ENST00000304236 CXorf67Q86X51 503 aaPredicted RBP11.86□□□□□ -0.51
RAB40A-201ENST00000304236 YPEL4Q96NS1 127 aa11.86□□□□□ -0.51
RAB40A-201ENST00000304236 CIB3Q96Q77 187 aaPredicted RBP11.86□□□□□ -0.51
RAB40A-201ENST00000304236 OR4C12Q96R67 309 aa11.86□□□□□ -0.51
RAB40A-201ENST00000304236 P2RX4Q99571 388 aa11.86□□□□□ -0.51
RAB40A-201ENST00000304236 C12orf57Q99622 126 aa11.86□□□□□ -0.51
RAB40A-201ENST00000304236 SEBOXQ9HB31 216 aaPredicted RBP11.86□□□□□ -0.51
RAB40A-201ENST00000304236 IGHV2OR16-5A0A0B4J2B6 119 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 LRRC30A6NM36 301 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 CLDN14O95500 239 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 ADH4P08319 380 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 BCL2P10415 239 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 HTD2P86397 168 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 COL10A1Q03692 680 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 Q6ZR03 302 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 BHLHA15Q7RTS1 189 aaPredicted RBP11.85□□□□□ -0.51
RAB40A-201ENST00000304236 CENPVQ7Z7K6 275 aaPredicted RBP11.85□□□□□ -0.51
RAB40A-201ENST00000304236 MRGPRDQ8TDS7 321 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 TCTEX1D2Q8WW35 142 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 TAF15Q92804 592 aaKnown RBP eCLIP11.85□□□□□ -0.51
RAB40A-201ENST00000304236 MUCL1Q96DR8 90 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 SPENQ96T58 3664 aaKnown RBP11.85□□□□□ -0.51
RAB40A-201ENST00000304236 HSD17B10Q99714 261 aaKnown RBP11.85□□□□□ -0.51
RAB40A-201ENST00000304236 hCG_1809904A0A1W2PP81 198 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 A0A1W2PR64 198 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 A0A1W2PRV1 198 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 SPINT2O43291 252 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 COL8A1P27658 744 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 FABP6P51161 128 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 CEBPGP53567 150 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 RPL30P62888 115 aaKnown RBP11.85□□□□□ -0.51
RAB40A-201ENST00000304236 DLK1P80370 383 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 ADAM5Q6NVV9 412 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 FAM90A1Q86YD7 464 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 MRPL37Q9BZE1 423 aaKnown RBP11.85□□□□□ -0.51
RAB40A-201ENST00000304236 GNG13Q9P2W3 67 aa11.85□□□□□ -0.51
RAB40A-201ENST00000304236 METTL1Q9UBP6 276 aaKnown RBP11.85□□□□□ -0.51
RAB40A-201ENST00000304236 IGHV1-18A0A0C4DH31 117 aa11.84□□□□□ -0.51
RAB40A-201ENST00000304236 RAMP3O60896 148 aa11.84□□□□□ -0.51
RAB40A-201ENST00000304236 LY86O95711 162 aa11.84□□□□□ -0.51
RAB40A-201ENST00000304236 PTBP3O95758 552 aaKnown RBP11.84□□□□□ -0.51
RAB40A-201ENST00000304236 KRASP01116 189 aa11.84□□□□□ -0.51
RAB40A-201ENST00000304236 PNRC1Q12796 327 aaPredicted RBP11.84□□□□□ -0.51
RAB40A-201ENST00000304236 FOXF2Q12947 444 aa11.84□□□□□ -0.51
RAB40A-201ENST00000304236 HEPN1Q6WQI6 88 aa11.84□□□□□ -0.51
RAB40A-201ENST00000304236 BEND4Q6ZU67 534 aa11.84□□□□□ -0.51
RAB40A-201ENST00000304236 MRGPRGQ86SM5 289 aa11.84□□□□□ -0.51
RAB40A-201ENST00000304236 LURAP1LQ8IV03 231 aa11.84□□□□□ -0.51
RAB40A-201ENST00000304236 ZNF808Q8N4W9 903 aaPredicted RBP11.84□□□□□ -0.51
RAB40A-201ENST00000304236 ZNF610Q8N9Z0 462 aa11.84□□□□□ -0.51
RAB40A-201ENST00000304236 PPP1R35Q8TAP8 253 aa11.84□□□□□ -0.51
RAB40A-201ENST00000304236 C5orf30Q96GV9 206 aa11.84□□□□□ -0.51
RAB40A-201ENST00000304236 RCC1LQ96I51 464 aaKnown RBP11.84□□□□□ -0.51
RAB40A-201ENST00000304236 TCEAL7Q9BRU2 100 aa11.84□□□□□ -0.51
RAB40A-201ENST00000304236 TMEM147Q9BVK8 224 aa11.84□□□□□ -0.51
RAB40A-201ENST00000304236 UFSP2Q9NUQ7 469 aa11.84□□□□□ -0.51
RAB40A-201ENST00000304236 ODAMA1E959 279 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 OR5H1A6NKK0 313 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 CGAP01215 116 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 MBP02144 154 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 G6PCP35575 357 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 S100A12P80511 92 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 ZNF816Q0VGE8 651 aaPredicted RBP11.83□□□□□ -0.52
RAB40A-201ENST00000304236 LCN15Q6UWW0 184 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 LRRC29Q8WV35 223 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 EDARADDQ8WWZ3 215 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 STARD4Q96DR4 205 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 MSL2Q9HCI7 577 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 POLEQ07864 2286 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 C17orf98A8MV24 154 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 EIF3GO75821 320 aaKnown RBP eCLIP11.83□□□□□ -0.52
RAB40A-201ENST00000304236 TNFSF13O75888 250 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 S1PR2O95136 353 aa11.83□□□□□ -0.52
RAB40A-201ENST00000304236 S100A9P06702 114 aaKnown RBP11.83□□□□□ -0.52
RAB40A-201ENST00000304236 PRDX2P32119 198 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms