RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 RBKSQ9H477 322 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 C19orf12Q9NSK7 152 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 DCAF16Q9NXF7 216 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 M0R1X1 148 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 IFNA5P01569 189 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 IAPPP10997 89 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 TGIF2LYQ8IUE0 185 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 LFNGQ8NES3 379 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 OR2G3Q8NGZ4 309 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 DDB2Q92466 427 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 R3HDM4Q96D70 268 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 HIPK2Q9H2X6 1198 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 GAL3ST2Q9H3Q3 398 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 PRORYQ9H606 182 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 KAAG1Q9UBP8 84 aa16.04■□□□□ 0.16
HOXC4-201ENST00000303406 SLC25A10Q9UBX3 287 aaPredicted RBP16.04■□□□□ 0.16
HOXC4-201ENST00000303406 RPUSD1Q9UJJ7 312 aaKnown RBP16.04■□□□□ 0.16
HOXC4-201ENST00000303406 CARHSP1Q9Y2V2 147 aaKnown RBP16.04■□□□□ 0.16
HOXC4-201ENST00000303406 PLCE1Q9P212 2302 aa16.03■□□□□ 0.16
HOXC4-201ENST00000303406 MARCH11A6NNE9 402 aa16.03■□□□□ 0.16
HOXC4-201ENST00000303406 FAM90A27PA6NNH2 459 aa16.03■□□□□ 0.16
HOXC4-201ENST00000303406 NDUFA2O43678 99 aa16.03■□□□□ 0.16
HOXC4-201ENST00000303406 SCO1O75880 301 aa16.03■□□□□ 0.16
HOXC4-201ENST00000303406 FSTL3O95633 263 aa16.03■□□□□ 0.16
HOXC4-201ENST00000303406 CD5P06127 495 aa16.03■□□□□ 0.16
HOXC4-201ENST00000303406 THBS3P49746 956 aa16.03■□□□□ 0.16
HOXC4-201ENST00000303406 ADORA2A-AS1P86434 159 aa16.03■□□□□ 0.16
HOXC4-201ENST00000303406 CT45A1Q5HYN5 189 aa16.03■□□□□ 0.16
HOXC4-201ENST00000303406 TMEM217Q8N7C4 229 aa16.03■□□□□ 0.16
HOXC4-201ENST00000303406 CT45A3Q8NHU0 189 aa16.03■□□□□ 0.16
HOXC4-201ENST00000303406 NARS2Q96I59 477 aaKnown RBP16.03■□□□□ 0.16
HOXC4-201ENST00000303406 MEX3AA1L020 520 aaKnown RBP16.02■□□□□ 0.15
HOXC4-201ENST00000303406 TMPRSS2O15393 492 aa16.02■□□□□ 0.15
HOXC4-201ENST00000303406 ZG16O60844 167 aa16.02■□□□□ 0.15
HOXC4-201ENST00000303406 TSPAN15O95858 294 aa16.02■□□□□ 0.15
HOXC4-201ENST00000303406 APOC3P02656 99 aa16.02■□□□□ 0.15
HOXC4-201ENST00000303406 PRH1P02810 166 aa16.02■□□□□ 0.15
HOXC4-201ENST00000303406 DVL1P1P54792 670 aaPredicted RBP16.02■□□□□ 0.15
HOXC4-201ENST00000303406 TMEM267Q0VDI3 215 aaPredicted RBP16.02■□□□□ 0.15
HOXC4-201ENST00000303406 TMEM182Q6ZP80 229 aaPredicted RBP16.02■□□□□ 0.15
HOXC4-201ENST00000303406 ZNF525Q8N782 197 aa16.02■□□□□ 0.15
HOXC4-201ENST00000303406 OR52E5Q8NH55 327 aa16.02■□□□□ 0.15
HOXC4-201ENST00000303406 SUN5Q8TC36 379 aa16.02■□□□□ 0.15
HOXC4-201ENST00000303406 S1PR3Q99500 378 aa16.02■□□□□ 0.15
HOXC4-201ENST00000303406 UQCC1Q9NVA1 299 aa16.02■□□□□ 0.15
HOXC4-201ENST00000303406 CEP295Q9C0D2 2601 aa16.01■□□□□ 0.15
HOXC4-201ENST00000303406 A0A1B0GW64 132 aa16.01■□□□□ 0.15
HOXC4-201ENST00000303406 RNASEK-C17orf49H0YIS7 233 aa16.01■□□□□ 0.15
HOXC4-201ENST00000303406 H3BP45 60 aa16.01■□□□□ 0.15
HOXC4-201ENST00000303406 SLC31A2O15432 143 aa16.01■□□□□ 0.15
HOXC4-201ENST00000303406 PPIHO43447 177 aaKnown RBP16.01■□□□□ 0.15
HOXC4-201ENST00000303406 FCGR3BO75015 233 aa16.01■□□□□ 0.15
HOXC4-201ENST00000303406 ATP6V1FQ16864 119 aa16.01■□□□□ 0.15
HOXC4-201ENST00000303406 PDLIM3Q53GG5 364 aaPredicted RBP16.01■□□□□ 0.15
HOXC4-201ENST00000303406 OR4S2Q8NH73 311 aa16.01■□□□□ 0.15
HOXC4-201ENST00000303406 ZNF251Q9BRH9 671 aa16.01■□□□□ 0.15
HOXC4-201ENST00000303406 PSMG3Q9BT73 122 aaPredicted RBP16.01■□□□□ 0.15
HOXC4-201ENST00000303406 SEC11CQ9BY50 192 aa16.01■□□□□ 0.15
HOXC4-201ENST00000303406 TREM1Q9NP99 234 aa16.01■□□□□ 0.15
HOXC4-201ENST00000303406 BTBD17A6NE02 478 aa16■□□□□ 0.15
HOXC4-201ENST00000303406 C1QTNF9P0C862 333 aa16■□□□□ 0.15
HOXC4-201ENST00000303406 DAOP14920 347 aa16■□□□□ 0.15
HOXC4-201ENST00000303406 NQO2P16083 231 aa16■□□□□ 0.15
HOXC4-201ENST00000303406 NDUFB7P17568 137 aa16■□□□□ 0.15
HOXC4-201ENST00000303406 SNCAP37840 140 aa16■□□□□ 0.15
HOXC4-201ENST00000303406 ERVK-16P61578 105 aa16■□□□□ 0.15
HOXC4-201ENST00000303406 RPL39P5Q59GN2 51 aa16■□□□□ 0.15
HOXC4-201ENST00000303406 SLC25A48Q6ZT89 311 aaKnown RBP16■□□□□ 0.15
HOXC4-201ENST00000303406 HAPLN4Q86UW8 402 aa16■□□□□ 0.15
HOXC4-201ENST00000303406 ZCCHC24Q8N2G6 241 aaKnown RBP16■□□□□ 0.15
HOXC4-201ENST00000303406 LINC01560Q8TB33 94 aa16■□□□□ 0.15
HOXC4-201ENST00000303406 NEUROG1Q92886 237 aa16■□□□□ 0.15
HOXC4-201ENST00000303406 CACNA1DQ01668 2161 aa16■□□□□ 0.15
HOXC4-201ENST00000303406 NDUFB3O43676 98 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 METTL15P1P0C7V9 234 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 MRPS11P82912 194 aaKnown RBP15.99■□□□□ 0.15
HOXC4-201ENST00000303406 SRSF3P84103 164 aaKnown RBP15.99■□□□□ 0.15
HOXC4-201ENST00000303406 ZNF616Q08AN1 781 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 LRRC10Q5BKY1 277 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 SPANXN5Q5MJ07 72 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 SVBPQ8N300 66 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 SCGB1C1Q8TD33 95 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 DTD1Q8TEA8 209 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 ZCCHC14Q8WYQ9 949 aaKnown RBP15.99■□□□□ 0.15
HOXC4-201ENST00000303406 TMEM204Q9BSN7 226 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 CISD1Q9NZ45 108 aaKnown RBP15.99■□□□□ 0.15
HOXC4-201ENST00000303406 RP1L1Q8IWN7 2480 aaPredicted RBP15.99■□□□□ 0.15
HOXC4-201ENST00000303406 SAA2-SAA4A0A096LPE2 208 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 SAA2P0DJI9 122 aaPredicted RBP15.99■□□□□ 0.15
HOXC4-201ENST00000303406 ADCYAP1P18509 176 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 ARL16Q0P5N6 197 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 LRRC75BQ2VPJ9 315 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 UNQ6494/PRO21346Q6UXR6 183 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 HEPN1Q6WQI6 88 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 C8orf31Q8N9H6 132 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 CCL17Q92583 94 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 RAB39BQ96DA2 213 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 SMDT1Q9H4I9 107 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 LAMA5O15230 3695 aa15.99■□□□□ 0.15
HOXC4-201ENST00000303406 IGHV1-69-2A0A0G2JMI3 117 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms