RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 LIN7CQ9NUP9 197 aaKnown RBP9.17□□□□□ -0.94
ZNF558-201ENST00000301475 TNRC6AQ8NDV7 1962 aaKnown RBP9.17□□□□□ -0.94
ZNF558-201ENST00000301475 TRAV38-1A0A0B4J264 116 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 PIGBOS1A0A0B4J2F0 54 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 LNP1A1A4G5 178 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 TRAPPC2LH3BP13 241 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.16□□□□□ -0.94
ZNF558-201ENST00000301475 TDGF1P13385 188 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 LIFP15018 202 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 CTRLP40313 264 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 Q8N7P7 452 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 PSMF1Q92530 271 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 ZDHHC16Q969W1 377 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 BTF3L4Q96K17 158 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 CIB3Q96Q77 187 aaPredicted RBP9.16□□□□□ -0.94
ZNF558-201ENST00000301475 TMEM204Q9BSN7 226 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 NCKAP5O14513 1909 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 TRBV6-6A0A0A6YYG2 114 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 IGHV1OR15-9A0A0B4J2B8 117 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 CCL25O15444 150 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 PDE6DO43924 150 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 CBR3O75828 277 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 CCL2P13500 99 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 MRPL18Q9H0U6 180 aaKnown RBP9.16□□□□□ -0.94
ZNF558-201ENST00000301475 AKIRIN1Q9H9L7 192 aaPredicted RBP9.16□□□□□ -0.94
ZNF558-201ENST00000301475 HSPB7Q9UBY9 170 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 DOCK7Q96N67 2140 aa9.16□□□□□ -0.94
ZNF558-201ENST00000301475 MDFIC2A0A1B0GVS7 189 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 ZNF716A6NP11 495 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 FAM90A26D6RGX4 464 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 RAMP3O60896 148 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 TRIP6Q15654 476 aaKnown RBP9.15□□□□□ -0.94
ZNF558-201ENST00000301475 SAXO1Q8IYX7 474 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 ZNF709Q8N972 641 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 AGBL5Q8NDL9 886 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 SAMD10Q9BYL1 202 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 ZNF552Q9H707 407 aaPredicted RBP9.15□□□□□ -0.94
ZNF558-201ENST00000301475 WIPI2Q9Y4P8 454 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 CACNA1DQ01668 2161 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 F6UZH7 168 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 DEGS1O15121 323 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 ZG16O60844 167 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 TIMP3P35625 211 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 Q6ZVH6 145 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 SYT13Q7L8C5 426 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 RABEPKQ7Z6M1 372 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 KMT5CQ86Y97 462 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 DRAM1Q8N682 238 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 OR4B1Q8NGF8 309 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 OR5A2Q8NGI9 324 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 PRDM14Q9GZV8 571 aa9.15□□□□□ -0.94
ZNF558-201ENST00000301475 RBM7Q9Y580 266 aaKnown RBP9.15□□□□□ -0.94
ZNF558-201ENST00000301475 SH2D1BO14796 132 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 KRASP01116 189 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 IGHV3-9P01782 118 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 KITLGP21583 273 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 CCNOP22674 350 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 CD27P26842 260 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 DSCR4P56555 118 aaPredicted RBP9.15□□□□□ -0.95
ZNF558-201ENST00000301475 KRTDAPP60985 99 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 IGFBP7Q16270 282 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 HLA-DRB5Q30154 266 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 CEACAM21Q3KPI0 293 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 KRTCAP3Q53RY4 240 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 COLCA1Q6ZS62 124 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 AAED1Q7RTV5 226 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 MKXQ8IYA7 352 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 FAM103A1Q9BTL3 118 aaKnown RBP9.15□□□□□ -0.95
ZNF558-201ENST00000301475 DLL3Q9NYJ7 618 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 FAM186AA6NE01 2351 aa9.15□□□□□ -0.95
ZNF558-201ENST00000301475 LRP5LA4QPB2 252 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 NPIPB11E5RHQ5 1161 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 SLC17A3O00476 420 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 SCRG1O75711 98 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 G6PCP35575 357 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 PSG7Q13046 419 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 ATP6V1FQ16864 119 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 SPINK9Q5DT21 86 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 BAGE3Q86Y29 109 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 BAGE2Q86Y30 109 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 OR10P1Q8NGE3 313 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 SF3B5Q9BWJ5 86 aaKnown RBP9.14□□□□□ -0.95
ZNF558-201ENST00000301475 KCNIP2Q9NS61 270 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 SLC45A2Q9UMX9 530 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 NBEAQ8NFP9 2946 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 SCO2A0A1W2PP80 73 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 ODAMA1E959 279 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 OR5G3P0C626 314 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 P0C879 139 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 RAC1P63000 192 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 ZNF90Q03938 601 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 SPATA45Q537H7 98 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 C1orf174Q8IYL3 243 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 DEFB123Q8N688 67 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 APOBEC3DQ96AK3 386 aaPredicted RBP9.14□□□□□ -0.95
ZNF558-201ENST00000301475 LRFN3Q9BTN0 628 aa9.14□□□□□ -0.95
ZNF558-201ENST00000301475 DIRC3C9JPN6 131 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 VWC2Q2TAL6 325 aa9.13□□□□□ -0.95
ZNF558-201ENST00000301475 OR10G8Q8NGN5 311 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms