RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 KRASP01116 189 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 HKR1P10072 659 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 P2RY1P47900 373 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 ERVFRD-1P60508 538 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 GNB2P62879 340 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 UBA52P62987 128 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 EXOSC2Q13868 293 aaKnown RBP12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 CXorf66Q5JRM2 361 aaPredicted RBP12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 ODF3L1Q8IXM7 274 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 C8orf46Q8TAG6 207 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 COA4Q9NYJ1 87 aa12.89□□□□□ -0.35
HERPUD1-201ENST00000300302 A0A087X0M5 115 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 PPIAL4CA0A0B4J2A2 164 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 A0A1B0GX30 115 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 hCG_1809904A0A1W2PP81 198 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 A0A1W2PPE2 198 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 A0A1W2PR64 198 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 A0A1W2PRV1 198 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 F5H0A9 414 aaPredicted RBP12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 RBP4P02753 201 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 PPIAL4GP0DN37 164 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 IGHV1-8P0DP01 117 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 MMP9P14780 707 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 G6PCP35575 357 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 VAMP2P63027 116 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 ZNF251Q9BRH9 671 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 ZNF471Q9BX82 626 aaPredicted RBP12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 SESN1Q9Y6P5 492 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 DOPEY1Q5JWR5 2465 aa12.88□□□□□ -0.35
HERPUD1-201ENST00000300302 TAAR5O14804 337 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 NDUFS7O75251 213 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 SPDEFO95238 335 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 CFDP00746 253 aaPredicted RBP12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 LINC00205P59089 165 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 POLR2GP62487 172 aaKnown RBP eCLIP12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 GPR157Q5UAW9 335 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 Q6ZRM9 215 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 H2BFWTQ7Z2G1 175 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 LINC00311Q8N616 119 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 OR4S2Q8NH73 311 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 J3QR06 171 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 SSSCA1O60232 199 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 DMBX1Q8NFW5 382 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 OR10X1Q8NGY0 326 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 OR9G1Q8NH87 305 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 ZNF596Q8TC21 504 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 DDB2Q92466 427 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 CCL19Q99731 98 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 SSBP3Q9BWW4 388 aaPredicted RBP12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 MAGT1Q9H0U3 335 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 TMEM133Q9H2Q1 129 aa12.87□□□□□ -0.35
HERPUD1-201ENST00000300302 MARCH11A6NNE9 402 aa12.86□□□□□ -0.35
HERPUD1-201ENST00000300302 FAM90A26D6RGX4 464 aa12.86□□□□□ -0.35
HERPUD1-201ENST00000300302 GPR137BO60478 399 aa12.86□□□□□ -0.35
HERPUD1-201ENST00000300302 LIPFP07098 398 aa12.86□□□□□ -0.35
HERPUD1-201ENST00000300302 IZUMO4Q1ZYL8 232 aa12.86□□□□□ -0.35
HERPUD1-201ENST00000300302 C1orf229Q6ZS94 237 aaPredicted RBP12.86□□□□□ -0.35
HERPUD1-201ENST00000300302 OR8H3Q8N146 312 aa12.86□□□□□ -0.35
HERPUD1-201ENST00000300302 ST8SIA2Q92186 375 aa12.86□□□□□ -0.35
HERPUD1-201ENST00000300302 R3HDM4Q96D70 268 aa12.86□□□□□ -0.35
HERPUD1-201ENST00000300302 TOR1AO14656 332 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 NXPH3O95157 252 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 P0C879 139 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 ERVK-16P61578 105 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 FAM71F2Q6NXP2 309 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 ZNF833PQ6ZTB9 187 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 ABHD12Q8N2K0 398 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 C11orf42Q8N5U0 333 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 OR2C3Q8N628 320 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 LY6G5BQ8NDX9 201 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 TNFRSF14Q92956 283 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 TMEM186Q96B77 213 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 RAB40CQ96S21 281 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 NARFLQ9H6Q4 476 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 USF3Q68DE3 2245 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 J3QKU1 62 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 CHST1O43916 411 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 COX6B1P14854 86 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 ARHGDIBP52566 201 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 RAB14P61106 215 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 SCARB1Q8WTV0 552 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 IGFBPL1Q8WX77 278 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 PHYHIPLQ96FC7 376 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 SLC25A31Q9H0C2 315 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 C11orf1Q9H5F2 150 aa12.85□□□□□ -0.35
HERPUD1-201ENST00000300302 DOCK11Q5JSL3 2073 aa12.84□□□□□ -0.35
HERPUD1-201ENST00000300302 ARID1AO14497 2285 aa12.84□□□□□ -0.35
HERPUD1-201ENST00000300302 LOC105371242A0A075B767 164 aa12.84□□□□□ -0.35
HERPUD1-201ENST00000300302 FAM90A9PA6NNJ1 464 aa12.84□□□□□ -0.35
HERPUD1-201ENST00000300302 KIAA1324LA8MWY0 1029 aaPredicted RBP12.84□□□□□ -0.35
HERPUD1-201ENST00000300302 TPT1P13693 172 aaKnown RBP12.84□□□□□ -0.35
HERPUD1-201ENST00000300302 NQO2P16083 231 aa12.84□□□□□ -0.35
HERPUD1-201ENST00000300302 IL3RAP26951 378 aa12.84□□□□□ -0.35
HERPUD1-201ENST00000300302 CAV2P51636 162 aa12.84□□□□□ -0.35
HERPUD1-201ENST00000300302 PRRX1P54821 245 aa12.84□□□□□ -0.35
HERPUD1-201ENST00000300302 EIF5AP63241 154 aaKnown RBP12.84□□□□□ -0.35
HERPUD1-201ENST00000300302 TAGLNQ01995 201 aaKnown RBP12.84□□□□□ -0.35
HERPUD1-201ENST00000300302 RTL8BQ17RB0 113 aa12.84□□□□□ -0.35
HERPUD1-201ENST00000300302 ZNF383Q8NA42 475 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms