RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 CLDN14O95500 239 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 CYB5R3P00387 301 aaPredicted RBP11.31□□□□□ -0.6
CASC4-201ENST00000299957 HIST1H2BJP06899 126 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 CSRP1P21291 193 aaKnown RBP11.31□□□□□ -0.6
CASC4-201ENST00000299957 HIST1H2BOP23527 126 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 HIST1H2BBP33778 126 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 HIST1H2BDP58876 126 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 HIST1H2BCP62807 126 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 CCL8P80075 99 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 ICAM4Q14773 271 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 HIST2H2BEQ16778 126 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.31□□□□□ -0.6
CASC4-201ENST00000299957 FADS6Q8N9I5 356 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 HIST1H2BHQ93079 126 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 TAAR6Q96RI8 345 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 HIST1H2BNQ99877 126 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 HIST1H2BMQ99879 126 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 PILRBQ9UKJ0 227 aa11.31□□□□□ -0.6
CASC4-201ENST00000299957 YLPM1P49750 1951 aaKnown RBP11.31□□□□□ -0.6
CASC4-201ENST00000299957 DUXBA0A1W2PPF3 345 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 C17orf98A8MV24 154 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 CRISP2P16562 243 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 ORM2P19652 201 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 SUMO1P63165 101 aaKnown RBP11.3□□□□□ -0.6
CASC4-201ENST00000299957 HES1Q14469 280 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 DTX1Q86Y01 620 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 PLPPR1Q8TBJ4 325 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 C22orf15Q8WYQ4 148 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 WBP1Q96G27 269 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 COA4Q9NYJ1 87 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 FKBP11Q9NYL4 201 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 SSUH2Q9Y2M2 353 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 ACACBO00763 2458 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 IGHV3-72A0A0B4J1Y9 119 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 K7N7A8 449 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 SP1P08047 785 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 OR10G8Q8NGN5 311 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 DECR2Q9NUI1 292 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 PITPNC1Q9UKF7 332 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 PTPRQQ9UMZ3 2332 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 IGLV3-12A0A075B6K2 115 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 CTXND1A0A1B0GTU2 59 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 SNURFLB1AK76 121 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 DDTP30046 118 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 UBE2G1P62253 170 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 TNFRSF9Q07011 255 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 TRA2AQ13595 282 aaKnown RBP eCLIP11.3□□□□□ -0.6
CASC4-201ENST00000299957 TBX15Q96SF7 602 aa11.3□□□□□ -0.6
CASC4-201ENST00000299957 MALRD1Q5VYJ5 2156 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 HSBP1O75506 76 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 CSN3P07498 182 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 ZNF25P17030 456 aaPredicted RBP11.29□□□□□ -0.6
CASC4-201ENST00000299957 CD1BP29016 333 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 PLA2G5P39877 138 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 IQCJQ1A5X6 159 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 RSPO1Q2MKA7 263 aaPredicted RBP11.29□□□□□ -0.6
CASC4-201ENST00000299957 TRAT1Q6PIZ9 186 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 C20orf204Q6ZNR8 217 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 NUDT16L1Q9BRJ7 211 aaKnown RBP11.29□□□□□ -0.6
CASC4-201ENST00000299957 PTPN13Q12923 2485 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 SLC17A3O00476 420 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 TCAPO15273 167 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 TMEM50AO95807 157 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 GATA2P23769 480 aaPredicted RBP11.29□□□□□ -0.6
CASC4-201ENST00000299957 UCP2P55851 309 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 RPL39P5Q59GN2 51 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 Q8IYB0 196 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 ATOH7Q8N100 152 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 CMTM2Q8TAZ6 248 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 SARAFQ96BY9 339 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 ZNF586Q9NXT0 402 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 TECRQ9NZ01 308 aaKnown RBP11.29□□□□□ -0.6
CASC4-201ENST00000299957 FBLN5Q9UBX5 448 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 C5orf52A6NGY3 159 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 ZNF716A6NP11 495 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 RRP8O43159 456 aaKnown RBP11.29□□□□□ -0.6
CASC4-201ENST00000299957 ZNF253O75346 499 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 CNIH1O95406 144 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 UCP1P25874 307 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 OPRK1P41145 380 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 PYY3Q5JQD4 70 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 Q6ZRM9 215 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 SLC35E1Q96K37 410 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 C18orf12Q96KH6 178 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 VAMP8Q9BV40 100 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 CRIM1Q9NZV1 1036 aa11.29□□□□□ -0.6
CASC4-201ENST00000299957 KIF26AQ9ULI4 1882 aaPredicted RBP11.29□□□□□ -0.6
CASC4-201ENST00000299957 ODAMA1E959 279 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 CCL1P22362 96 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 MRPS11P82912 194 aaKnown RBP11.28□□□□□ -0.6
CASC4-201ENST00000299957 MOB1BQ7L9L4 216 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 TCF23Q7RTU1 214 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 CLDND2Q8NHS1 167 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 OPN3Q9H1Y3 402 aaPredicted RBP11.28□□□□□ -0.6
CASC4-201ENST00000299957 SIRT7Q9NRC8 400 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 SLC35D1Q9NTN3 355 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 CBLN1P23435 193 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 ATP5G3P48201 142 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 GNG4P50150 75 aa11.28□□□□□ -0.6
CASC4-201ENST00000299957 RIPPLY2Q5TAB7 128 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms