RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 TRIM61Q5EBN2 209 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 Q8NFD4 153 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 TRBV20OR9-2A0A075B6H5 130 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 A0A096LPE4 126 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 A0A1W2PPZ6 126 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 LNP1A1A4G5 178 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 CD99P14209 185 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 LIFP15018 202 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 YPEL3P61236 119 aaPredicted RBP10.99□□□□□ -0.65
TVP23A-201ENST00000299866 SUMO1P63165 101 aaKnown RBP10.99□□□□□ -0.65
TVP23A-201ENST00000299866 Q6ZN92 141 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 STRADBQ9C0K7 418 aa10.99□□□□□ -0.65
TVP23A-201ENST00000299866 IGHV1OR15-9A0A0B4J2B8 117 aa10.98□□□□□ -0.65
TVP23A-201ENST00000299866 A0A1W2PPV4 95 aa10.98□□□□□ -0.65
TVP23A-201ENST00000299866 PDE6DO43924 150 aa10.98□□□□□ -0.65
TVP23A-201ENST00000299866 RAMP3O60896 148 aa10.98□□□□□ -0.65
TVP23A-201ENST00000299866 COMPP49747 757 aaPredicted RBP10.98□□□□□ -0.65
TVP23A-201ENST00000299866 OR1L6Q8NGR2 347 aa10.98□□□□□ -0.65
TVP23A-201ENST00000299866 OCC1Q8TAD7 63 aa10.98□□□□□ -0.65
TVP23A-201ENST00000299866 ZNF552Q9H707 407 aaPredicted RBP10.98□□□□□ -0.65
TVP23A-201ENST00000299866 DLL3Q9NYJ7 618 aa10.98□□□□□ -0.65
TVP23A-201ENST00000299866 R4GN57 208 aa10.98□□□□□ -0.65
TVP23A-201ENST00000299866 CCL25O15444 150 aa10.98□□□□□ -0.65
TVP23A-201ENST00000299866 NDUFB8O95169 186 aa10.98□□□□□ -0.65
TVP23A-201ENST00000299866 CD27P26842 260 aa10.98□□□□□ -0.65
TVP23A-201ENST00000299866 DSCR4P56555 118 aaPredicted RBP10.98□□□□□ -0.65
TVP23A-201ENST00000299866 PCBD1P61457 104 aa10.98□□□□□ -0.65
TVP23A-201ENST00000299866 RABEPKQ7Z6M1 372 aa10.98□□□□□ -0.65
TVP23A-201ENST00000299866 ZNF808Q8N4W9 903 aaPredicted RBP10.98□□□□□ -0.65
TVP23A-201ENST00000299866 DRAM1Q8N682 238 aa10.98□□□□□ -0.65
TVP23A-201ENST00000299866 TRAPPC2LQ9UL33 140 aa10.98□□□□□ -0.65
TVP23A-201ENST00000299866 C5orf49A4QMS7 147 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 DKK1O94907 266 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 PMCHP20382 165 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 TGFBR3Q03167 851 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 COTL1Q14019 142 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 ATP6V1FQ16864 119 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 HLA-DRB5Q30154 266 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 KIAA1644Q3SXP7 199 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 KRTCAP3Q53RY4 240 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 ETFRF1Q6IPR1 90 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 KMT5CQ86Y97 462 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 TSTD1Q8NFU3 115 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 PCED1AQ9H1Q7 454 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 CACNA1DQ01668 2161 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 SCO2A0A1W2PP80 73 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 SNURFLB1AK76 121 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 TMPRSS2O15393 492 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 IGLV3-19P01714 112 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 SELENOTP62341 195 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 RAC1P63000 192 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 KRTAP27-1Q3LI81 207 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 CADM4Q8NFZ8 388 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 APOBEC3DQ96AK3 386 aaPredicted RBP10.97□□□□□ -0.65
TVP23A-201ENST00000299866 STARD4Q96DR4 205 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 ZNF586Q9NXT0 402 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 IGHV3-64DA0A0J9YX35 117 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 DEGS1O15121 323 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 TDGF1P13385 188 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 HNRNPA3P51991 378 aaKnown RBP10.97□□□□□ -0.65
TVP23A-201ENST00000299866 CEACAM21Q3KPI0 293 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 TIPARPQ7Z3E1 657 aaKnown RBP10.97□□□□□ -0.65
TVP23A-201ENST00000299866 C1QTNF5Q9BXJ0 243 aa10.97□□□□□ -0.65
TVP23A-201ENST00000299866 SYNGR4O95473 234 aa10.96□□□□□ -0.65
TVP23A-201ENST00000299866 RNF151Q2KHN1 245 aa10.96□□□□□ -0.65
TVP23A-201ENST00000299866 ATOH7Q8N100 152 aa10.96□□□□□ -0.65
TVP23A-201ENST00000299866 LRFN3Q9BTN0 628 aa10.96□□□□□ -0.65
TVP23A-201ENST00000299866 ODAMA1E959 279 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 LRP5LA4QPB2 252 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 C17orf112F2Z3M2 114 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 IGHEP01854 428 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 GLB1P16278 677 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 TIMP3P35625 211 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 AMTP48728 403 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 HINT1P49773 126 aaPredicted RBP10.96□□□□□ -0.66
TVP23A-201ENST00000299866 RBX1P62877 108 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 LEMD1Q68G75 181 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 FAM53AQ6NSI3 398 aaPredicted RBP10.96□□□□□ -0.66
TVP23A-201ENST00000299866 FAM58AQ8N1B3 248 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 OR4B1Q8NGF8 309 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 SPSB4Q96A44 273 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 WNT10AQ9GZT5 417 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 CLEC1BQ9P126 229 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 HSPB7Q9UBY9 170 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 TBL2Q9Y4P3 447 aaKnown RBP10.96□□□□□ -0.66
TVP23A-201ENST00000299866 USF3Q68DE3 2245 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 RHBDL1O75783 438 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 NGFP01138 241 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 RAC3P60763 192 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 WDR74Q6RFH5 385 aaPredicted RBP10.96□□□□□ -0.66
TVP23A-201ENST00000299866 C22orf15Q8WYQ4 148 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 CCDC74BQ96LY2 380 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 PROK2Q9HC23 129 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 KCNIP2Q9NS61 270 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 C19orf25Q9UFG5 118 aaPredicted RBP10.96□□□□□ -0.66
TVP23A-201ENST00000299866 LAMTOR2Q9Y2Q5 125 aa10.96□□□□□ -0.66
TVP23A-201ENST00000299866 PMS2P5A8MQ11 134 aa10.95□□□□□ -0.66
TVP23A-201ENST00000299866 COL8A2P25067 703 aa10.95□□□□□ -0.66
TVP23A-201ENST00000299866 SLC35B1P78383 322 aa10.95□□□□□ -0.66
TVP23A-201ENST00000299866 UNQ5815/PRO19632Q6UWF5 114 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms