RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CD34P28906 385 aa17.07■□□□□ 0.32
SMCO4-201ENST00000298966 RAB7AP51149 207 aa17.07■□□□□ 0.32
SMCO4-201ENST00000298966 PIGPP57054 158 aa17.07■□□□□ 0.32
SMCO4-201ENST00000298966 C5orf24Q7Z6I8 188 aa17.07■□□□□ 0.32
SMCO4-201ENST00000298966 BVESQ8NE79 360 aa17.07■□□□□ 0.32
SMCO4-201ENST00000298966 LINC01006Q8NI28 216 aa17.07■□□□□ 0.32
SMCO4-201ENST00000298966 SECTM1Q8WVN6 248 aa17.07■□□□□ 0.32
SMCO4-201ENST00000298966 SSMEM1Q8WWF3 244 aa17.07■□□□□ 0.32
SMCO4-201ENST00000298966 GALNT14Q96FL9 552 aa17.07■□□□□ 0.32
SMCO4-201ENST00000298966 PHB2Q99623 299 aa17.07■□□□□ 0.32
SMCO4-201ENST00000298966 ZNF436Q9C0F3 470 aaPredicted RBP17.07■□□□□ 0.32
SMCO4-201ENST00000298966 C19orf12Q9NSK7 152 aa17.07■□□□□ 0.32
SMCO4-201ENST00000298966 GFOD1Q9NXC2 390 aa17.07■□□□□ 0.32
SMCO4-201ENST00000298966 hCG_1809904A0A1W2PP81 198 aa17.06■□□□□ 0.32
SMCO4-201ENST00000298966 A0A1W2PPE2 198 aa17.06■□□□□ 0.32
SMCO4-201ENST00000298966 A0A1W2PR64 198 aa17.06■□□□□ 0.32
SMCO4-201ENST00000298966 A0A1W2PRV1 198 aa17.06■□□□□ 0.32
SMCO4-201ENST00000298966 HLA-GP17693 338 aa17.06■□□□□ 0.32
SMCO4-201ENST00000298966 PI3P19957 117 aa17.06■□□□□ 0.32
SMCO4-201ENST00000298966 LOXL3P58215 753 aa17.06■□□□□ 0.32
SMCO4-201ENST00000298966 PROK1P58294 105 aa17.06■□□□□ 0.32
SMCO4-201ENST00000298966 SUPT4H1P63272 117 aaKnown RBP17.06■□□□□ 0.32
SMCO4-201ENST00000298966 MORN2Q502X0 79 aa17.06■□□□□ 0.32
SMCO4-201ENST00000298966 RUSC1-AS1Q66K80 236 aa17.06■□□□□ 0.32
SMCO4-201ENST00000298966 TMEM200BQ69YZ2 307 aa17.06■□□□□ 0.32
SMCO4-201ENST00000298966 OR52L2PQ8NGH6 319 aa17.06■□□□□ 0.32
SMCO4-201ENST00000298966 COQ8AQ8NI60 647 aa17.06■□□□□ 0.32
SMCO4-201ENST00000298966 RTN4IP1Q8WWV3 396 aaPredicted RBP17.06■□□□□ 0.32
SMCO4-201ENST00000298966 FYTTD1Q96QD9 318 aaKnown RBP17.06■□□□□ 0.32
SMCO4-201ENST00000298966 GAB2Q9UQC2 676 aa17.06■□□□□ 0.32
SMCO4-201ENST00000298966 TEX13DA0A0J9YY54 714 aaPredicted RBP17.05■□□□□ 0.32
SMCO4-201ENST00000298966 FCN3O75636 299 aa17.05■□□□□ 0.32
SMCO4-201ENST00000298966 OR2A4O95047 310 aa17.05■□□□□ 0.32
SMCO4-201ENST00000298966 GIPP09681 153 aaPredicted RBP17.05■□□□□ 0.32
SMCO4-201ENST00000298966 GNRHRP30968 328 aa17.05■□□□□ 0.32
SMCO4-201ENST00000298966 SRPXP78539 464 aa17.05■□□□□ 0.32
SMCO4-201ENST00000298966 C2orf68Q2NKX9 166 aa17.05■□□□□ 0.32
SMCO4-201ENST00000298966 ZFP69Q49AA0 526 aa17.05■□□□□ 0.32
SMCO4-201ENST00000298966 ZNF645Q8N7E2 425 aa17.05■□□□□ 0.32
SMCO4-201ENST00000298966 C8orf31Q8N9H6 132 aa17.05■□□□□ 0.32
SMCO4-201ENST00000298966 RFESDQ8TAC1 157 aa17.05■□□□□ 0.32
SMCO4-201ENST00000298966 OR2A7Q96R45 310 aa17.05■□□□□ 0.32
SMCO4-201ENST00000298966 NAA60Q9H7X0 242 aa17.05■□□□□ 0.32
SMCO4-201ENST00000298966 RPUSD1Q9UJJ7 312 aaKnown RBP17.05■□□□□ 0.32
SMCO4-201ENST00000298966 IGKV1D-13A0A0B4J2D9 117 aa17.04■□□□□ 0.32
SMCO4-201ENST00000298966 GPR137BO60478 399 aa17.04■□□□□ 0.32
SMCO4-201ENST00000298966 C1QBP02746 253 aa17.04■□□□□ 0.32
SMCO4-201ENST00000298966 IGKV1-13P0DP09 117 aa17.04■□□□□ 0.32
SMCO4-201ENST00000298966 EIF2B2P49770 351 aaKnown RBP17.04■□□□□ 0.32
SMCO4-201ENST00000298966 RAP2BP61225 183 aa17.04■□□□□ 0.32
SMCO4-201ENST00000298966 ZNF273Q14593 569 aa17.04■□□□□ 0.32
SMCO4-201ENST00000298966 LDLRAD3Q86YD5 345 aa17.04■□□□□ 0.32
SMCO4-201ENST00000298966 LY6G5BQ8NDX9 201 aa17.04■□□□□ 0.32
SMCO4-201ENST00000298966 PCGF1Q9BSM1 259 aa17.04■□□□□ 0.32
SMCO4-201ENST00000298966 DBX1A6NMT0 343 aa17.03■□□□□ 0.32
SMCO4-201ENST00000298966 C17orf98A8MV24 154 aa17.03■□□□□ 0.32
SMCO4-201ENST00000298966 MPPED1O15442 326 aa17.03■□□□□ 0.32
SMCO4-201ENST00000298966 LIPFP07098 398 aa17.03■□□□□ 0.32
SMCO4-201ENST00000298966 OR8U9P0C7N5 309 aa17.03■□□□□ 0.32
SMCO4-201ENST00000298966 PPP1CCP36873 323 aaKnown RBP17.03■□□□□ 0.32
SMCO4-201ENST00000298966 ZNF818PQ6ZRF7 136 aa17.03■□□□□ 0.32
SMCO4-201ENST00000298966 TCTEX1D1Q8N7M0 179 aa17.03■□□□□ 0.32
SMCO4-201ENST00000298966 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.03■□□□□ 0.32
SMCO4-201ENST00000298966 OR8U1Q8NH10 309 aa17.03■□□□□ 0.32
SMCO4-201ENST00000298966 UBALD1Q8TB05 177 aa17.03■□□□□ 0.32
SMCO4-201ENST00000298966 CASTOR1Q8WTX7 329 aa17.03■□□□□ 0.32
SMCO4-201ENST00000298966 CCL28Q9NRJ3 127 aa17.03■□□□□ 0.32
SMCO4-201ENST00000298966 A0A087X0M5 115 aa17.02■□□□□ 0.32
SMCO4-201ENST00000298966 A0A1B0GX30 115 aa17.02■□□□□ 0.32
SMCO4-201ENST00000298966 ENSAO43768 121 aaKnown RBP17.02■□□□□ 0.32
SMCO4-201ENST00000298966 DLX6P56179 175 aa17.02■□□□□ 0.32
SMCO4-201ENST00000298966 GNMTQ14749 295 aa17.02■□□□□ 0.32
SMCO4-201ENST00000298966 BEAN1Q3B7T3 259 aa17.02■□□□□ 0.32
SMCO4-201ENST00000298966 FGFRL1Q8N441 504 aa17.02■□□□□ 0.32
SMCO4-201ENST00000298966 UXS1Q8NBZ7 420 aa17.02■□□□□ 0.32
SMCO4-201ENST00000298966 OR5M8Q8NGP6 311 aa17.02■□□□□ 0.32
SMCO4-201ENST00000298966 FAM212BQ9NTI7 297 aaPredicted RBP17.02■□□□□ 0.32
SMCO4-201ENST00000298966 TET2Q6N021 2002 aaPredicted RBP17.01■□□□□ 0.31
SMCO4-201ENST00000298966 GOSR2O14653 212 aa17.01■□□□□ 0.31
SMCO4-201ENST00000298966 PHLDA2Q53GA4 152 aa17.01■□□□□ 0.31
SMCO4-201ENST00000298966 LIN54Q6MZP7 749 aa17.01■□□□□ 0.31
SMCO4-201ENST00000298966 TNFRSF14Q92956 283 aa17.01■□□□□ 0.31
SMCO4-201ENST00000298966 ABHD14AQ9BUJ0 271 aa17.01■□□□□ 0.31
SMCO4-201ENST00000298966 PIPOXQ9P0Z9 390 aa17.01■□□□□ 0.31
SMCO4-201ENST00000298966 IGHV3-43A0A0B4J1X8 118 aa17■□□□□ 0.31
SMCO4-201ENST00000298966 G3V4G9 280 aa17■□□□□ 0.31
SMCO4-201ENST00000298966 M0R1W7 72 aa17■□□□□ 0.31
SMCO4-201ENST00000298966 HSD17B6O14756 317 aa17■□□□□ 0.31
SMCO4-201ENST00000298966 IGHV3-43DP0DP04 118 aa17■□□□□ 0.31
SMCO4-201ENST00000298966 CATR1Q13166 79 aa17■□□□□ 0.31
SMCO4-201ENST00000298966 ANKRD55Q3KP44 614 aa17■□□□□ 0.31
SMCO4-201ENST00000298966 ZNF66Q6ZN08 573 aa17■□□□□ 0.31
SMCO4-201ENST00000298966 NOXA1Q86UR1 476 aa17■□□□□ 0.31
SMCO4-201ENST00000298966 LRTM2Q8N967 370 aa17■□□□□ 0.31
SMCO4-201ENST00000298966 AGMATQ9BSE5 352 aa17■□□□□ 0.31
SMCO4-201ENST00000298966 OR2D2Q9H210 308 aa17■□□□□ 0.31
SMCO4-201ENST00000298966 RANBP3Q9H6Z4 567 aaPredicted RBP17■□□□□ 0.31
SMCO4-201ENST00000298966 RAB18Q9NP72 206 aa17■□□□□ 0.31
SMCO4-201ENST00000298966 LIN7CQ9NUP9 197 aaKnown RBP17■□□□□ 0.31
SMCO4-201ENST00000298966 SESN1Q9Y6P5 492 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms