RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 LHX2P50458 406 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 TESK1Q15569 626 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 FBXW9Q5XUX1 488 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 COLCA1Q6ZS62 124 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 OR2M7Q8NG81 312 aa13.18□□□□□ -0.3
UBAP1-201ENST00000297661 GCH1P30793 250 aa13.17□□□□□ -0.3
UBAP1-201ENST00000297661 PSMG3Q9BT73 122 aaPredicted RBP13.17□□□□□ -0.3
UBAP1-201ENST00000297661 FOXJ2Q9P0K8 574 aa13.17□□□□□ -0.3
UBAP1-201ENST00000297661 PAM16Q9Y3D7 125 aa13.17□□□□□ -0.3
UBAP1-201ENST00000297661 TRAPPC2LH3BP13 241 aa13.17□□□□□ -0.3
UBAP1-201ENST00000297661 SRP14P37108 136 aaKnown RBP13.17□□□□□ -0.3
UBAP1-201ENST00000297661 FGF12P61328 243 aa13.17□□□□□ -0.3
UBAP1-201ENST00000297661 RPP30P78346 268 aaKnown RBP13.17□□□□□ -0.3
UBAP1-201ENST00000297661 SSPNQ14714 243 aa13.17□□□□□ -0.3
UBAP1-201ENST00000297661 C11orf42Q8N5U0 333 aa13.17□□□□□ -0.3
UBAP1-201ENST00000297661 MRPL30Q8TCC3 161 aaKnown RBP13.17□□□□□ -0.3
UBAP1-201ENST00000297661 IMMP2LQ96T52 175 aa13.17□□□□□ -0.3
UBAP1-201ENST00000297661 ZNF703Q9H7S9 590 aaPredicted RBP13.17□□□□□ -0.3
UBAP1-201ENST00000297661 BOKQ9UMX3 212 aaPredicted RBP13.17□□□□□ -0.3
UBAP1-201ENST00000297661 ZFP30Q9Y2G7 519 aa13.17□□□□□ -0.3
UBAP1-201ENST00000297661 TRAPPC1Q9Y5R8 145 aa13.17□□□□□ -0.3
UBAP1-201ENST00000297661 A0A0G2JRQ6 117 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 DUXBA0A1W2PPF3 345 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 TNFSF15O95150 251 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 NAPSAO96009 420 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 UCP1P25874 307 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 IL3RAP26951 378 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 CLDN18P56856 261 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 ACSF3Q4G176 576 aaPredicted RBP13.16□□□□□ -0.3
UBAP1-201ENST00000297661 TMEM41BQ5BJD5 291 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 TMEM106BQ9NUM4 274 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 ANKRD11Q6UB99 2663 aaPredicted RBP13.16□□□□□ -0.3
UBAP1-201ENST00000297661 YPEL1O60688 119 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 RHBDL1O75783 438 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 CNOT4O95628 575 aaKnown RBP13.16□□□□□ -0.3
UBAP1-201ENST00000297661 GYPAP02724 150 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 RPL15P61313 204 aaKnown RBP13.16□□□□□ -0.3
UBAP1-201ENST00000297661 SERF2P84101 59 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 ARL16Q0P5N6 197 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 CEACAM21Q3KPI0 293 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 COL5A1-AS1Q5SY13 56 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 KCNIP4Q6PIL6 250 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 NUFIP2Q7Z417 695 aaKnown RBP13.16□□□□□ -0.3
UBAP1-201ENST00000297661 OR5T1Q8NG75 326 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 YPEL2Q96QA6 119 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 PLSCR2Q9NRY7 297 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 SLC39A9Q9NUM3 307 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 MED12LQ86YW9 2145 aa13.16□□□□□ -0.3
UBAP1-201ENST00000297661 TMEM250H0YL14 139 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 HMGB3O15347 200 aaKnown RBP13.15□□□□□ -0.3
UBAP1-201ENST00000297661 RAB7AP51149 207 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 TPTE2P1Q5T6R2 138 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 FAM78BQ5VT40 261 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 TEX43Q6ZNM6 134 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 STRADBQ9C0K7 418 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 MANBALQ9NQG1 85 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 A0A0U1RQK1 487 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 A0A1W2PR80 420 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 ZNF320A2RRD8 509 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 IGHEP01854 428 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 CHRNA7P36544 502 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 TMEM183BQ1AE95 376 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 ZNF525Q8N782 197 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 OR4F5Q8NH21 305 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 OR4F4Q96R69 305 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 ACACBO00763 2458 aa13.15□□□□□ -0.3
UBAP1-201ENST00000297661 CD300LBA8K4G0 201 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 C9orf172C9J069 976 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 PSMB3P49720 205 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 LCN2P80188 198 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 OR1C1Q15619 314 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 SAPCD1Q5SSQ6 148 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 ABHD17BQ5VST6 288 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 ALKBH2Q6NS38 261 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 Q6ZWC4 215 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 TMPRSS7Q7RTY8 843 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 MKXQ8IYA7 352 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 CMTM2Q8TAZ6 248 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 RNASE8Q8TDE3 154 aaKnown RBP13.14□□□□□ -0.31
UBAP1-201ENST00000297661 TTTY12Q9BZ98 90 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 OR1A1Q9P1Q5 309 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 CA6P23280 308 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 RBX1P62877 108 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 RPP25LQ8N5L8 163 aaKnown RBP13.14□□□□□ -0.31
UBAP1-201ENST00000297661 TMEM45BQ96B21 275 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 PINX1Q96BK5 328 aaKnown RBP13.14□□□□□ -0.31
UBAP1-201ENST00000297661 RAB40CQ96S21 281 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 PRR14LQ5THK1 2151 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 ARHGAP21Q5T5U3 1957 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 ATMQ13315 3056 aa13.14□□□□□ -0.31
UBAP1-201ENST00000297661 PGLYRP1O75594 196 aaPredicted RBP13.13□□□□□ -0.31
UBAP1-201ENST00000297661 SYNGR4O95473 234 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 CHRNB4P30926 498 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 RANP62826 216 aaKnown RBP13.13□□□□□ -0.31
UBAP1-201ENST00000297661 HOXA4Q00056 320 aaPredicted RBP13.13□□□□□ -0.31
UBAP1-201ENST00000297661 PLGLB1Q02325 96 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 LRRC75BQ2VPJ9 315 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 GATAD1Q8WUU5 269 aa13.13□□□□□ -0.31
UBAP1-201ENST00000297661 APOBEC3DQ96AK3 386 aaPredicted RBP13.13□□□□□ -0.31
UBAP1-201ENST00000297661 APH1AQ96BI3 265 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms