RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 ACOT6Q3I5F7 207 aaPredicted RBP10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 ASCL4Q6XD76 172 aa10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 FOXL2NBQ6ZUU3 175 aa10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 MAFAQ8NHW3 353 aaPredicted RBP10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 TUBG2Q9NRH3 451 aa10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 FKBP11Q9NYL4 201 aa10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 OR5B21A6NL26 309 aa10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 F6UZH7 168 aa10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 RAMP3O60896 148 aa10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 HRASP01112 189 aa10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 FGF5P12034 268 aa10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 NUTF2P61970 127 aaKnown RBP10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 TNFRSF9Q07011 255 aa10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 TBC1D28Q2M2D7 210 aa10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 FAM53AQ6NSI3 398 aaPredicted RBP10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 OR4A16Q8NH70 328 aa10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 SGMS2Q8NHU3 365 aa10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 SSMEM1Q8WWF3 244 aa10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 RNF115Q9Y4L5 304 aa10.67□□□□□ -0.7
TMEM200A-201ENST00000296978 FAM90A10PA6NDY2 464 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 FAM90A18PA6NE21 464 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 FAM90A16PA6NEW6 464 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 FAM90A20PA6NIJ5 464 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 FAM90A8PA6NJQ4 464 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 FAM90A7PA6NKC0 464 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 FAM90A22PA8MWA6 464 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 FAM90A12PA8MX19 464 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 FAM90A5PA8MXJ8 464 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 FAM90A23PA8MXZ1 464 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 S1PR2O95136 353 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 MT-CO3P00414 261 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 FAM90A15PP0C7V4 464 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 FAM90A13PP0C7W8 464 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 FAM90A14PP0C7W9 464 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 FAM90A24PP0C7X0 464 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 LINC00205P59089 165 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 HTD2P86397 168 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 TMEM164Q5U3C3 297 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 C6orf15Q6UXA7 325 aaPredicted RBP10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 PLPPR1Q8TBJ4 325 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 P2RX4Q99571 388 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 FCGR3BO75015 233 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 LYZL6O75951 148 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 HOXA4Q00056 320 aaPredicted RBP10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 ZNF324BQ6AW86 544 aaPredicted RBP10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 ACSM6Q6P461 480 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 CYP2G1PQ6ZSU1 146 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 MPC1Q9Y5U8 109 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 MED13Q9UHV7 2174 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 J3QT63 122 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 ACTL6BO94805 426 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 HOXA6P31267 233 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 CNN1P51911 297 aaKnown RBP10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 ERVK-16P61578 105 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 OR1C1Q15619 314 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 GCSAMLQ5JQS6 135 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 ENY2Q9NPA8 101 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 LOXL2Q9Y4K0 774 aa10.66□□□□□ -0.7
TMEM200A-201ENST00000296978 ZNF25P17030 456 aaPredicted RBP10.65□□□□□ -0.7
TMEM200A-201ENST00000296978 ALKBH6Q3KRA9 238 aa10.65□□□□□ -0.7
TMEM200A-201ENST00000296978 PCSK4Q6UW60 755 aa10.65□□□□□ -0.7
TMEM200A-201ENST00000296978 MDP1Q86V88 176 aa10.65□□□□□ -0.7
TMEM200A-201ENST00000296978 ZNF664Q8N3J9 261 aa10.65□□□□□ -0.7
TMEM200A-201ENST00000296978 CT55Q8WUE5 264 aa10.65□□□□□ -0.7
TMEM200A-201ENST00000296978 IL17BQ9UHF5 180 aa10.65□□□□□ -0.7
TMEM200A-201ENST00000296978 A0A1B0GUS0 222 aa10.65□□□□□ -0.7
TMEM200A-201ENST00000296978 IFNL4K9M1U5 179 aa10.65□□□□□ -0.7
TMEM200A-201ENST00000296978 LAMTOR5O43504 91 aa10.65□□□□□ -0.7
TMEM200A-201ENST00000296978 TIMM8AO60220 97 aaPredicted RBP10.65□□□□□ -0.7
TMEM200A-201ENST00000296978 CD81P60033 236 aa10.65□□□□□ -0.7
TMEM200A-201ENST00000296978 PSMG3Q9BT73 122 aaPredicted RBP10.65□□□□□ -0.7
TMEM200A-201ENST00000296978 DUSP13Q9UII6 198 aa10.65□□□□□ -0.7
TMEM200A-201ENST00000296978 PAM16Q9Y3D7 125 aa10.65□□□□□ -0.7
TMEM200A-201ENST00000296978 TRBV24-1A0A075B6N3 115 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 GZMBP10144 247 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 CEACAM1P13688 526 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 JOSD1Q15040 202 aaPredicted RBP10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 OR5P3Q8WZ94 311 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 WNT9BO14905 357 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 IGKV1-39P01597 117 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 IGKV1D-39P04432 117 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 B3GALT5-AS1P59052 145 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 SCCPDHQ8NBX0 429 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 TBX15Q96SF7 602 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 FAM173AQ9BQD7 235 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 LOC102723996A0A087X1L8 192 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 TMEM30CPA0ZSE6 113 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 ODAMA1E959 279 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 IGKV1D-33P01593 117 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 IGKV1-33P01594 117 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 WNT5AP41221 380 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 ATP5G3P48201 142 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 TCF23Q7RTU1 214 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 ODF3L1Q8IXM7 274 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 RNF138Q8WVD3 245 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 STRADBQ9C0K7 418 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 FGF23Q9GZV9 251 aaPredicted RBP10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 PLEKHA3Q9HB20 300 aa10.64□□□□□ -0.71
TMEM200A-201ENST00000296978 PARD6AQ9NPB6 346 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms