RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 LBHQ53QV2 105 aaPredicted RBP12.87□□□□□ -0.35
LSM6-201ENST00000296581 CDPF1Q6NVV7 123 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 TGIF2LXQ8IUE1 241 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 DRAM1Q8N682 238 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 ZNF645Q8N7E2 425 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 FAM216AQ8WUB2 273 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 RAB9BQ9NP90 201 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 KAAG1Q9UBP8 84 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 KCNS2Q9ULS6 477 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 TMED3Q9Y3Q3 217 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 TRGV10A0A0A0MS01 117 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 IGHV3-43A0A0B4J1X8 118 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 CXorf65A6NEN9 183 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 DANCRP0C864 163 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 IGHV3-43DP0DP04 118 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 LOXL3P58215 753 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 TMEM268Q5VZI3 342 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 MEX3BQ6ZN04 569 aaKnown RBP12.87□□□□□ -0.35
LSM6-201ENST00000296581 ZNF546Q86UE3 836 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 DTX2Q86UW9 622 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 SLC35G3Q8N808 338 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 IL22RA2Q969J5 263 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 LINC00574Q9H8X3 128 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 SLC25A10Q9UBX3 287 aaPredicted RBP12.87□□□□□ -0.35
LSM6-201ENST00000296581 TNFSF18Q9UNG2 199 aa12.87□□□□□ -0.35
LSM6-201ENST00000296581 A0A0D9SG52 128 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 KBTBD11-OT1A0A1B0GTJ5 212 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 DUXBA0A1W2PPF3 345 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 YPEL1O60688 119 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 SELENOHQ8IZQ5 122 aaKnown RBP12.86□□□□□ -0.35
LSM6-201ENST00000296581 FGFRL1Q8N441 504 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 MISP3Q96FF7 219 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 YPEL2Q96QA6 119 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 CLN8Q9UBY8 286 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 A0A1W2PPR1 153 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 KANTRA0A1W2PQU2 76 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 FCN3O75636 299 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 LYL1P12980 280 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 RAB5CP51148 216 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 EIF4EBP1Q13541 118 aaPredicted RBP12.86□□□□□ -0.35
LSM6-201ENST00000296581 MORN2Q502X0 79 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 LYPD2Q6UXB3 125 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 CLCC1Q96S66 551 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 RNF126Q9BV68 326 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 RAB1BQ9H0U4 201 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 OR2D2Q9H210 308 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 TREM1Q9NP99 234 aa12.86□□□□□ -0.35
LSM6-201ENST00000296581 H0YIZ8 118 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 IFNA10P01566 189 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 SOD3P08294 240 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 COL8A2P25067 703 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 DDTP30046 118 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 ZNF695Q8IW36 515 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 C5orf30Q96GV9 206 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 AGMATQ9BSE5 352 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 UQCC1Q9NVA1 299 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 GSKIPQ9P0R6 139 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 RNF150Q9ULK6 438 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 SMG1Q96Q15 3661 aaKnown RBP12.85□□□□□ -0.35
LSM6-201ENST00000296581 hADV38S2A0JD32 116 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 ADAM20O43506 726 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 BCL2L11O43521 198 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 MT-ND4LP03901 98 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 MEF2CQ06413 473 aaPredicted RBP12.85□□□□□ -0.35
LSM6-201ENST00000296581 RAB32Q13637 225 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 PRSS54Q6PEW0 395 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 KCNRGQ8N5I3 272 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 OR51H1Q8NH63 302 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 TMEM231Q9H6L2 316 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 GNG12Q9UBI6 72 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 CTSZQ9UBR2 303 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 LINC00312Q9Y6C7 94 aa12.85□□□□□ -0.35
LSM6-201ENST00000296581 RNF212BA8MTL3 300 aa12.84□□□□□ -0.35
LSM6-201ENST00000296581 ITGB1BP1O14713 200 aa12.84□□□□□ -0.35
LSM6-201ENST00000296581 PRB1P04280 392 aa12.84□□□□□ -0.35
LSM6-201ENST00000296581 ZNF345Q14585 488 aa12.84□□□□□ -0.35
LSM6-201ENST00000296581 LTC4SQ16873 150 aa12.84□□□□□ -0.35
LSM6-201ENST00000296581 TMEM30BQ3MIR4 351 aa12.84□□□□□ -0.35
LSM6-201ENST00000296581 LIN7CQ9NUP9 197 aaKnown RBP12.84□□□□□ -0.35
LSM6-201ENST00000296581 PIGBOS1A0A0B4J2F0 54 aa12.83□□□□□ -0.35
LSM6-201ENST00000296581 RNF222A6NCQ9 220 aa12.83□□□□□ -0.35
LSM6-201ENST00000296581 NDUFB3O43676 98 aa12.83□□□□□ -0.35
LSM6-201ENST00000296581 MRPS11P82912 194 aaKnown RBP12.83□□□□□ -0.35
LSM6-201ENST00000296581 NEU4Q8WWR8 484 aaPredicted RBP12.83□□□□□ -0.35
LSM6-201ENST00000296581 ZNF471Q9BX82 626 aaPredicted RBP12.83□□□□□ -0.35
LSM6-201ENST00000296581 PSG11Q9UQ72 335 aa12.83□□□□□ -0.35
LSM6-201ENST00000296581 LYNX1G3V0Z9 82 aa12.83□□□□□ -0.36
LSM6-201ENST00000296581 FGF16O43320 207 aa12.83□□□□□ -0.36
LSM6-201ENST00000296581 OR2F2O95006 317 aa12.83□□□□□ -0.36
LSM6-201ENST00000296581 PET100P0DJ07 73 aa12.83□□□□□ -0.36
LSM6-201ENST00000296581 LYNX1P0DP58 116 aa12.83□□□□□ -0.36
LSM6-201ENST00000296581 HIST1H1BP16401 226 aaKnown RBP12.83□□□□□ -0.36
LSM6-201ENST00000296581 VDAC1P21796 283 aa12.83□□□□□ -0.36
LSM6-201ENST00000296581 OMGP23515 440 aa12.83□□□□□ -0.36
LSM6-201ENST00000296581 F2RL1P55085 397 aa12.83□□□□□ -0.36
LSM6-201ENST00000296581 OR2F1Q13607 317 aa12.83□□□□□ -0.36
LSM6-201ENST00000296581 CLINT1Q14677 625 aa12.83□□□□□ -0.36
LSM6-201ENST00000296581 LRRC10Q5BKY1 277 aa12.83□□□□□ -0.36
LSM6-201ENST00000296581 NMSQ5H8A3 153 aa12.83□□□□□ -0.36
LSM6-201ENST00000296581 ACOT7LQ6ZUV0 252 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms