RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 TAAR6Q96RI8 345 aa11.52□□□□□ -0.57
HPS3-201ENST00000296051 TMEM208Q9BTX3 173 aa11.52□□□□□ -0.57
HPS3-201ENST00000296051 ZNF785A8K8V0 405 aa11.52□□□□□ -0.57
HPS3-201ENST00000296051 C9orf172C9J069 976 aa11.52□□□□□ -0.57
HPS3-201ENST00000296051 C9JQL5 133 aa11.52□□□□□ -0.57
HPS3-201ENST00000296051 F8VVB4 439 aa11.52□□□□□ -0.57
HPS3-201ENST00000296051 F8VWA3 439 aa11.52□□□□□ -0.57
HPS3-201ENST00000296051 HAX1O00165 279 aa11.52□□□□□ -0.57
HPS3-201ENST00000296051 ZIC3O60481 467 aa11.52□□□□□ -0.57
HPS3-201ENST00000296051 HOXA6P31267 233 aa11.52□□□□□ -0.57
HPS3-201ENST00000296051 SLC25A47Q6Q0C1 308 aa11.52□□□□□ -0.57
HPS3-201ENST00000296051 GPR146Q96CH1 333 aa11.52□□□□□ -0.57
HPS3-201ENST00000296051 TMEM56Q96MV1 263 aa11.52□□□□□ -0.57
HPS3-201ENST00000296051 HSPB9Q9BQS6 159 aa11.52□□□□□ -0.57
HPS3-201ENST00000296051 SNURFLB1AK76 121 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 IGKV3-11P04433 115 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 CELA3AP09093 270 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 RFPL3SP0C7P2 107 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 UCP2P55851 309 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 FAM27E3Q08E93 113 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 Q96M66 194 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 SRD5A3Q9H8P0 318 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 AMMECR1Q9Y4X0 333 aaPredicted RBP11.51□□□□□ -0.57
HPS3-201ENST00000296051 C5orf52A6NGY3 159 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 HOXA5P20719 270 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 GLIPR1P48060 266 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 ZNF818PQ6ZRF7 136 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 A0A0A6YYD4 124 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 RPL36A-HNRNPH2H7BZ11 118 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 CHD8Q9HCK8 2581 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 PMELP40967 661 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 REC114Q7Z4M0 266 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 KLHDC1Q8N7A1 406 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 SLC24A4Q8NFF2 622 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 OR5AU1Q8NGC0 362 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 ZNF596Q8TC21 504 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 STARD4Q96DR4 205 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 LYRM2Q9NU23 88 aaPredicted RBP11.51□□□□□ -0.57
HPS3-201ENST00000296051 C1RLQ9NZP8 487 aa11.51□□□□□ -0.57
HPS3-201ENST00000296051 ZNF407Q9C0G0 2248 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 A0A0U1RQV5 110 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 SYNGR1O43759 233 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 SUPT4H1P63272 117 aaKnown RBP11.5□□□□□ -0.57
HPS3-201ENST00000296051 TNXAQ16473 311 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 KIAA1644Q3SXP7 199 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 ASPHD2Q6ICH7 369 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 TGIF2LYQ8IUE0 185 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 ZNF837Q96EG3 531 aaPredicted RBP11.5□□□□□ -0.57
HPS3-201ENST00000296051 CCL13Q99616 98 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 ZNF835Q9Y2P0 537 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 GOLT1BQ9Y3E0 138 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 TCF20Q9UGU0 1960 aaKnown RBP11.5□□□□□ -0.57
HPS3-201ENST00000296051 IGKV1-9A0A0C4DH69 117 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 HAND1O96004 215 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 SRP19P09132 144 aaKnown RBP11.5□□□□□ -0.57
HPS3-201ENST00000296051 CCKARP32238 428 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 OPRK1P41145 380 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 GNG4P50150 75 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 OR2V2Q96R30 315 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 RASL11BQ9BPW5 248 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 SMDT1Q9H4I9 107 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 LRRC3CA6NJW4 275 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 J3QT63 122 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 RAB7AP51149 207 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 MOB1BQ7L9L4 216 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 OR4P4Q8NGL7 312 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 THYN1Q9P016 225 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 CHEK1O14757 476 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 APELAP0DMC3 54 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 REG1BP48304 166 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 TNFSF10P50591 281 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 ITLN1Q8WWA0 313 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 HSD17B10Q99714 261 aaKnown RBP11.5□□□□□ -0.57
HPS3-201ENST00000296051 RNF24Q9Y225 148 aa11.5□□□□□ -0.57
HPS3-201ENST00000296051 HIST1H2BKO60814 126 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 HIST1H2BJP06899 126 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 HIST1H2BOP23527 126 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 HIST1H2BBP33778 126 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 HIST1H2BDP58876 126 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 HIST1H2BCP62807 126 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 RANP62826 216 aaKnown RBP11.49□□□□□ -0.57
HPS3-201ENST00000296051 PLAURQ03405 335 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 HIST2H2BEQ16778 126 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.49□□□□□ -0.57
HPS3-201ENST00000296051 FAM27BQ5VT28 67 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 SELENOHQ8IZQ5 122 aaKnown RBP11.49□□□□□ -0.57
HPS3-201ENST00000296051 HIST1H2BHQ93079 126 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 HIST1H2BNQ99877 126 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 HIST1H2BMQ99879 126 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 CTXND1A0A1B0GTU2 59 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 SMPD2O60906 423 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 SSX8Q7RTT4 187 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 PERPQ96FX8 193 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 MKI67P46013 3256 aaKnown RBP11.49□□□□□ -0.57
HPS3-201ENST00000296051 CCDC168Q8NDH2 2452 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 THADAQ6YHU6 1953 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 A0A1B0GU03 582 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 UBE2CO00762 179 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 OR10J1P30954 320 aa11.49□□□□□ -0.57
HPS3-201ENST00000296051 LGALS7P47929 136 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms