RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 Q56UQ5 140 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 PEAR1Q5VY43 1037 aaPredicted RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 DHRS11Q6UWP2 260 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 BIVMQ86UB2 503 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 ZIC4Q8N9L1 334 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 OIT3Q8WWZ8 545 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 PTX4Q96A99 478 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 HS3ST6Q96QI5 342 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 PCGF1Q9BSM1 259 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 ZNF331Q9NQX6 463 aaPredicted RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 SLC25A10Q9UBX3 287 aaPredicted RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 MDH2P40926 338 aaKnown RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 MRPL54Q6P161 138 aaKnown RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 C9orf106Q8NAJ2 232 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 MOB3AQ96BX8 217 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 TOLLIPQ9H0E2 274 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 WDFY4Q6ZS81 3184 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 TMSB15BA0A087X1C1 80 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 TRBV23-1A0A0A0MS06 115 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 PRR19A6NJB7 356 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 PLXNB1O43157 2135 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 CLN5O75503 358 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 NEURL1O76050 574 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 CD74P04233 296 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 SUB1P53999 127 aaKnown RBP eCLIP4.07□□□□□ -1.76
UBR1-201ENST00000290650 MIC13Q5XKP0 118 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 MOB1BQ7L9L4 216 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 POC1AQ8NBT0 407 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 OR1L4Q8NGR5 311 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 C10orf35Q96D05 121 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 BTF3L4Q96K17 158 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 RNF126Q9BV68 326 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 IGHV3OR16-8A0A075B7F1 116 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 IGSF23A1L1A6 192 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 LYNX1G3V0Z9 82 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 GATCO43716 136 aaKnown RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 CSN3P07498 182 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 LYNX1P0DP58 116 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 SELLP14151 372 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 ACP1P24666 158 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 HIST1H3AP68431 136 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 PSG7Q13046 419 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 OR5I1Q13606 314 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 DRAM1Q8N682 238 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 ASB13Q8WXK3 278 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 OR4C12Q96R67 309 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 QTRT1Q9BXR0 403 aaKnown RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 SEC11CQ9BY50 192 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 ARL2-SNX15V9GYD0 113 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 NUP210LQ5VU65 1888 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 LRRC3CA6NJW4 275 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 CECR9P0C854 216 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 ZNF735P0CB33 412 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 CD24P25063 80 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 ZNF345Q14585 488 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 TIGITQ495A1 244 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 RNF212Q495C1 297 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 FAM53AQ6NSI3 398 aaPredicted RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 C16orf82Q7Z2V1 217 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 DDA1Q9BW61 102 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 SIRT7Q9NRC8 400 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 GAR1Q9NY12 217 aaKnown RBP4.07□□□□□ -1.76
UBR1-201ENST00000290650 RNF7Q9UBF6 113 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 NAGKQ9UJ70 344 aa4.07□□□□□ -1.76
UBR1-201ENST00000290650 CGB1A6NKQ9 187 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 SMPD2O60906 423 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 FABP1P07148 127 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 ANOS1P23352 680 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 HGFACQ04756 655 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 IL24Q13007 206 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 C10orf128Q5T292 105 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 INO80CQ6PI98 192 aaPredicted RBP4.06□□□□□ -1.76
UBR1-201ENST00000290650 TRAT1Q6PIZ9 186 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 GGNQ86UU5 652 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 KIR3DL3Q8N743 410 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 OR5P3Q8WZ94 311 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 DPF1Q92782 380 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 FAM131CQ96AQ9 280 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 TMEM147Q9BVK8 224 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 C16orf97H3BN30 126 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 HRASP01112 189 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 IGHV3-23P01764 117 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 TRGC2P03986 189 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 GNG4P50150 75 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 CLDN18P56856 261 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 SURF2Q15527 256 aaPredicted RBP4.06□□□□□ -1.76
UBR1-201ENST00000290650 ABLIM2Q6H8Q1 611 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 SRD5A3Q9H8P0 318 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 OR6C3Q9NZP0 311 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 NAT8BQ9UHF3 227 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 OR51B2Q9Y5P1 312 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 NDUFB4O95168 129 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 GATA2P23769 480 aaPredicted RBP4.06□□□□□ -1.76
UBR1-201ENST00000290650 SULT1A2P50226 295 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 ZNF137PP52743 207 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 ERVFRD-1P60508 538 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 FXYD3Q14802 87 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 KRTCAP3Q53RY4 240 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 GTF2H5Q6ZYL4 71 aa4.06□□□□□ -1.76
UBR1-201ENST00000290650 IGLV3-12A0A075B6K2 115 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms